RNA–Protein interactions for RNA: ENST00000543610.5

CCDC189-206, Transcript of coiled-coil domain containing 189, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC189, Length 1,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-206ENST00000543610 YTHDC2Q9H6S0 1430 aaKnown RBP28.14■■■□□ 2.09
CCDC189-206ENST00000543610 RCAN3Q9UKA8 241 aa28.12■■■□□ 2.09
CCDC189-206ENST00000543610 CABP2Q9NPB3 220 aa28.1■■■□□ 2.09
CCDC189-206ENST00000543610 ANKRD36BQ8N2N9 1353 aa28.09■■■□□ 2.09
CCDC189-206ENST00000543610 PLEKHH1Q9ULM0 1364 aa28.09■■■□□ 2.09
CCDC189-206ENST00000543610 RRP1P56182 461 aaKnown RBP28.08■■■□□ 2.09
CCDC189-206ENST00000543610 RIMS2Q9UQ26 1411 aa28.07■■■□□ 2.08
CCDC189-206ENST00000543610 MORC1Q86VD1 984 aa28.06■■■□□ 2.08
CCDC189-206ENST00000543610 POLR3AO14802 1390 aaPredicted RBP28.06■■■□□ 2.08
CCDC189-206ENST00000543610 SETD1AO15047 1707 aaKnown RBP28.06■■■□□ 2.08
CCDC189-206ENST00000543610 PRAM1Q96QH2 718 aa28.06■■■□□ 2.08
CCDC189-206ENST00000543610 CGNL1Q0VF96 1302 aa28.05■■■□□ 2.08
CCDC189-206ENST00000543610 ZMYM3Q14202 1370 aa28.05■■■□□ 2.08
CCDC189-206ENST00000543610 CCDC146Q8IYE0 955 aa28.03■■■□□ 2.08
CCDC189-206ENST00000543610 ESF1Q9H501 851 aaKnown RBP28.03■■■□□ 2.08
CCDC189-206ENST00000543610 SHPRHQ149N8 1683 aa28.02■■■□□ 2.08
CCDC189-206ENST00000543610 POGKQ9P215 609 aa28.02■■■□□ 2.08
CCDC189-206ENST00000543610 MINK1Q8N4C8 1332 aaPredicted RBP28.02■■■□□ 2.08
CCDC189-206ENST00000543610 ZNF521Q96K83 1311 aa28.02■■■□□ 2.08
CCDC189-206ENST00000543610 SRPK2P78362 688 aaKnown RBP28.02■■■□□ 2.08
CCDC189-206ENST00000543610 NINLQ9Y2I6 1382 aa28.02■■■□□ 2.08
CCDC189-206ENST00000543610 TNNT2P45379 298 aaPredicted RBP28■■■□□ 2.07
CCDC189-206ENST00000543610 A0A1W2PP64 1363 aa27.99■■■□□ 2.07
CCDC189-206ENST00000543610 NRXN3Q9Y4C0 1643 aa27.98■■■□□ 2.07
CCDC189-206ENST00000543610 NSD2O96028 1365 aa27.98■■■□□ 2.07
CCDC189-206ENST00000543610 ATAD2Q6PL18 1390 aa27.98■■■□□ 2.07
CCDC189-206ENST00000543610 DLC1Q96QB1 1528 aa27.97■■■□□ 2.07
CCDC189-206ENST00000543610 RBM19Q9Y4C8 960 aaKnown RBP27.97■■■□□ 2.07
CCDC189-206ENST00000543610 CCDC136Q96JN2 1154 aa27.96■■■□□ 2.07
CCDC189-206ENST00000543610 APAF1O14727 1248 aa27.95■■■□□ 2.06
CCDC189-206ENST00000543610 GOLGA2Q08379 1002 aa27.94■■■□□ 2.06
CCDC189-206ENST00000543610 ABCC11Q96J66 1382 aa27.94■■■□□ 2.06
CCDC189-206ENST00000543610 DUSP27Q5VZP5 1158 aa27.93■■■□□ 2.06
CCDC189-206ENST00000543610 CD163L1Q9NR16 1453 aa27.92■■■□□ 2.06
CCDC189-206ENST00000543610 TNRQ92752 1358 aa27.91■■■□□ 2.06
CCDC189-206ENST00000543610 MTHFSP49914 203 aa27.9■■■□□ 2.06
CCDC189-206ENST00000543610 EXOC6Q8TAG9 804 aa27.9■■■□□ 2.06
CCDC189-206ENST00000543610 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.9■■■□□ 2.06
CCDC189-206ENST00000543610 CDK19Q9BWU1 502 aa27.9■■■□□ 2.06
CCDC189-206ENST00000543610 ANKRD26Q9UPS8 1709 aa27.89■■■□□ 2.06
CCDC189-206ENST00000543610 UBR1Q8IWV7 1749 aa27.89■■■□□ 2.05
CCDC189-206ENST00000543610 SLFN5Q08AF3 891 aa27.88■■■□□ 2.05
CCDC189-206ENST00000543610 WAPLQ7Z5K2 1190 aa27.87■■■□□ 2.05
CCDC189-206ENST00000543610 TERF2IPQ9NYB0 399 aa27.87■■■□□ 2.05
CCDC189-206ENST00000543610 PLIN1O60240 522 aa27.86■■■□□ 2.05
CCDC189-206ENST00000543610 CFAP53Q96M91 514 aa27.84■■■□□ 2.05
CCDC189-206ENST00000543610 METP08581 1390 aa27.84■■■□□ 2.05
CCDC189-206ENST00000543610 NGEFQ8N5V2 710 aa27.84■■■□□ 2.05
CCDC189-206ENST00000543610 TRMT2AQ8IZ69 625 aaKnown RBP27.83■■■□□ 2.05
CCDC189-206ENST00000543610 KNDC1Q76NI1 1749 aa27.83■■■□□ 2.05
CCDC189-206ENST00000543610 GGNBP2Q9H3C7 697 aa27.82■■■□□ 2.04
CCDC189-206ENST00000543610 SPINK5Q9NQ38 1064 aaPredicted RBP27.82■■■□□ 2.04
CCDC189-206ENST00000543610 NLRP1Q9C000 1473 aa27.82■■■□□ 2.04
CCDC189-206ENST00000543610 KIF20BQ96Q89 1820 aa27.81■■■□□ 2.04
CCDC189-206ENST00000543610 MED14O60244 1454 aa27.81■■■□□ 2.04
CCDC189-206ENST00000543610 IQSEC2Q5JU85 1478 aa27.81■■■□□ 2.04
CCDC189-206ENST00000543610 CABP1Q9NZU7 370 aa27.8■■■□□ 2.04
CCDC189-206ENST00000543610 HDGFL2Q7Z4V5 671 aaPredicted RBP27.8■■■□□ 2.04
CCDC189-206ENST00000543610 TMEM2Q9UHN6 1383 aa27.79■■■□□ 2.04
CCDC189-206ENST00000543610 FYB1O15117 783 aa27.79■■■□□ 2.04
CCDC189-206ENST00000543610 HDGFP51858 240 aaKnown RBP27.79■■■□□ 2.04
CCDC189-206ENST00000543610 RUNDC1Q96C34 613 aa27.79■■■□□ 2.04
CCDC189-206ENST00000543610 NKTRP30414 1462 aaKnown RBP27.78■■■□□ 2.04
CCDC189-206ENST00000543610 DMRT2Q9Y5R5 561 aa27.78■■■□□ 2.04
CCDC189-206ENST00000543610 E9PSI1 815 aa27.77■■■□□ 2.04
CCDC189-206ENST00000543610 ATP7BP35670 1465 aa27.76■■■□□ 2.03
CCDC189-206ENST00000543610 WWC1Q8IX03 1113 aa27.75■■■□□ 2.03
CCDC189-206ENST00000543610 TECPR2O15040 1411 aa27.74■■■□□ 2.03
CCDC189-206ENST00000543610 CPS1P31327 1500 aa27.74■■■□□ 2.03
CCDC189-206ENST00000543610 CRBNQ96SW2 442 aa27.74■■■□□ 2.03
CCDC189-206ENST00000543610 TXNDC2Q86VQ3 553 aa27.73■■■□□ 2.03
CCDC189-206ENST00000543610 TCP11L2Q8N4U5 519 aa27.73■■■□□ 2.03
CCDC189-206ENST00000543610 COL3A1P02461 1466 aaPredicted RBP27.72■■■□□ 2.03
CCDC189-206ENST00000543610 C3P01024 1663 aa27.72■■■□□ 2.03
CCDC189-206ENST00000543610 FAM135BQ49AJ0 1406 aa27.72■■■□□ 2.03
CCDC189-206ENST00000543610 C20orf194Q5TEA3 1177 aa27.71■■■□□ 2.03
CCDC189-206ENST00000543610 RRP7AQ9Y3A4 280 aaKnown RBP27.71■■■□□ 2.03
CCDC189-206ENST00000543610 WASLO00401 505 aaPredicted RBP27.71■■■□□ 2.03
CCDC189-206ENST00000543610 NEUROD2Q15784 382 aa27.7■■■□□ 2.03
CCDC189-206ENST00000543610 U2AF1L5P0DN76 240 aaPredicted RBP27.69■■■□□ 2.02
CCDC189-206ENST00000543610 CEBPAP49715 358 aaPredicted RBP27.69■■■□□ 2.02
CCDC189-206ENST00000543610 U2AF1Q01081 240 aaKnown RBP eCLIP27.69■■■□□ 2.02
CCDC189-206ENST00000543610 ADAMTS13Q76LX8 1427 aa27.69■■■□□ 2.02
CCDC189-206ENST00000543610 FER1L4A9Z1Z3 1794 aa27.68■■■□□ 2.02
CCDC189-206ENST00000543610 ADGRB2O60241 1585 aa27.68■■■□□ 2.02
CCDC189-206ENST00000543610 SIRT1Q96EB6 747 aa27.68■■■□□ 2.02
CCDC189-206ENST00000543610 PPIP5K1Q6PFW1 1433 aa27.67■■■□□ 2.02
CCDC189-206ENST00000543610 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
CCDC189-206ENST00000543610 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.66■■■□□ 2.02
CCDC189-206ENST00000543610 CPSF1Q10570 1443 aaKnown RBP27.64■■■□□ 2.02
CCDC189-206ENST00000543610 PLEKHG1Q9ULL1 1385 aa27.64■■■□□ 2.02
CCDC189-206ENST00000543610 LTKP29376 864 aa27.64■■■□□ 2.02
CCDC189-206ENST00000543610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.64■■■□□ 2.02
CCDC189-206ENST00000543610 CCDC27Q2M243 656 aa27.62■■■□□ 2.01
CCDC189-206ENST00000543610 CDC42BPGQ6DT37 1551 aa27.62■■■□□ 2.01
CCDC189-206ENST00000543610 ROBO2Q9HCK4 1378 aa27.61■■■□□ 2.01
CCDC189-206ENST00000543610 U2SURPO15042 1029 aaKnown RBP27.61■■■□□ 2.01
CCDC189-206ENST00000543610 EDC4Q6P2E9 1401 aaKnown RBP27.61■■■□□ 2.01
CCDC189-206ENST00000543610 MON2Q7Z3U7 1717 aa27.61■■■□□ 2.01
CCDC189-206ENST00000543610 WDR63Q8IWG1 891 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms