RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 TULP4Q9NRJ4 1543 aa18.38■□□□□ 0.53
MSH2-206ENST00000543555 MYO5BQ9ULV0 1848 aa18.38■□□□□ 0.53
MSH2-206ENST00000543555 EVC2Q86UK5 1308 aa18.38■□□□□ 0.53
MSH2-206ENST00000543555 USP32Q8NFA0 1604 aa18.37■□□□□ 0.53
MSH2-206ENST00000543555 POLR3AO14802 1390 aaPredicted RBP18.37■□□□□ 0.53
MSH2-206ENST00000543555 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
MSH2-206ENST00000543555 GOLGA2Q08379 1002 aa18.35■□□□□ 0.53
MSH2-206ENST00000543555 DUSP27Q5VZP5 1158 aa18.35■□□□□ 0.53
MSH2-206ENST00000543555 CCDC146Q8IYE0 955 aa18.35■□□□□ 0.53
MSH2-206ENST00000543555 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
MSH2-206ENST00000543555 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
MSH2-206ENST00000543555 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.52
MSH2-206ENST00000543555 APAF1O14727 1248 aa18.32■□□□□ 0.52
MSH2-206ENST00000543555 PLIN1O60240 522 aa18.32■□□□□ 0.52
MSH2-206ENST00000543555 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
MSH2-206ENST00000543555 MYT1Q01538 1121 aa18.31■□□□□ 0.52
MSH2-206ENST00000543555 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
MSH2-206ENST00000543555 STK26Q9P289 416 aa18.31■□□□□ 0.52
MSH2-206ENST00000543555 PTPRMP28827 1452 aa18.3■□□□□ 0.52
MSH2-206ENST00000543555 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
MSH2-206ENST00000543555 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
MSH2-206ENST00000543555 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
MSH2-206ENST00000543555 TRMT2AQ8IZ69 625 aaKnown RBP18.29■□□□□ 0.52
MSH2-206ENST00000543555 SHPRHQ149N8 1683 aa18.29■□□□□ 0.52
MSH2-206ENST00000543555 NSD2O96028 1365 aa18.28■□□□□ 0.52
MSH2-206ENST00000543555 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
MSH2-206ENST00000543555 TNRQ92752 1358 aa18.28■□□□□ 0.52
MSH2-206ENST00000543555 TNNT2P45379 298 aaPredicted RBP18.28■□□□□ 0.52
MSH2-206ENST00000543555 ANP32EQ9BTT0 268 aa18.28■□□□□ 0.52
MSH2-206ENST00000543555 NINLQ9Y2I6 1382 aa18.28■□□□□ 0.52
MSH2-206ENST00000543555 ALKQ9UM73 1620 aa18.27■□□□□ 0.51
MSH2-206ENST00000543555 SPATA31D1Q6ZQQ2 1576 aa18.26■□□□□ 0.51
MSH2-206ENST00000543555 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
MSH2-206ENST00000543555 FER1L4A9Z1Z3 1794 aa18.25■□□□□ 0.51
MSH2-206ENST00000543555 MSH5O43196 834 aa18.25■□□□□ 0.51
MSH2-206ENST00000543555 PRAM1Q96QH2 718 aa18.25■□□□□ 0.51
MSH2-206ENST00000543555 SRPK2P78362 688 aaKnown RBP18.24■□□□□ 0.51
MSH2-206ENST00000543555 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
MSH2-206ENST00000543555 RIMS1Q86UR5 1692 aaKnown RBP18.24■□□□□ 0.51
MSH2-206ENST00000543555 A2ML1A8K2U0 1454 aa18.24■□□□□ 0.51
MSH2-206ENST00000543555 E9PSI1 815 aa18.24■□□□□ 0.51
MSH2-206ENST00000543555 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
MSH2-206ENST00000543555 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
MSH2-206ENST00000543555 MTHFSP49914 203 aa18.23■□□□□ 0.51
MSH2-206ENST00000543555 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
MSH2-206ENST00000543555 C20orf194Q5TEA3 1177 aa18.23■□□□□ 0.51
MSH2-206ENST00000543555 POGKQ9P215 609 aa18.23■□□□□ 0.51
MSH2-206ENST00000543555 ABCC11Q96J66 1382 aa18.22■□□□□ 0.51
MSH2-206ENST00000543555 MINK1Q8N4C8 1332 aaPredicted RBP18.22■□□□□ 0.51
MSH2-206ENST00000543555 CFAP53Q96M91 514 aa18.22■□□□□ 0.51
MSH2-206ENST00000543555 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.21■□□□□ 0.51
MSH2-206ENST00000543555 C3P01024 1663 aa18.21■□□□□ 0.51
MSH2-206ENST00000543555 RUNDC1Q96C34 613 aa18.2■□□□□ 0.5
MSH2-206ENST00000543555 KDM4FA0A1W2PPD8 638 aa18.2■□□□□ 0.5
MSH2-206ENST00000543555 LTKP29376 864 aa18.2■□□□□ 0.5
MSH2-206ENST00000543555 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
MSH2-206ENST00000543555 IQSEC2Q5JU85 1478 aa18.2■□□□□ 0.5
MSH2-206ENST00000543555 RIMS2Q9UQ26 1411 aa18.2■□□□□ 0.5
MSH2-206ENST00000543555 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
MSH2-206ENST00000543555 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
MSH2-206ENST00000543555 TERF2IPQ9NYB0 399 aa18.18■□□□□ 0.5
MSH2-206ENST00000543555 CD163L1Q9NR16 1453 aa18.18■□□□□ 0.5
MSH2-206ENST00000543555 DLC1Q96QB1 1528 aa18.17■□□□□ 0.5
MSH2-206ENST00000543555 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
MSH2-206ENST00000543555 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
MSH2-206ENST00000543555 TCP11L2Q8N4U5 519 aa18.16■□□□□ 0.5
MSH2-206ENST00000543555 SETD1AO15047 1707 aaKnown RBP18.16■□□□□ 0.5
MSH2-206ENST00000543555 MED14O60244 1454 aa18.15■□□□□ 0.5
MSH2-206ENST00000543555 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
MSH2-206ENST00000543555 CDK19Q9BWU1 502 aa18.15■□□□□ 0.5
MSH2-206ENST00000543555 HSPA2P54652 639 aa18.15■□□□□ 0.5
MSH2-206ENST00000543555 NLRP1Q9C000 1473 aa18.14■□□□□ 0.49
MSH2-206ENST00000543555 GGNBP2Q9H3C7 697 aa18.14■□□□□ 0.49
MSH2-206ENST00000543555 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
MSH2-206ENST00000543555 ANKRD26Q9UPS8 1709 aa18.13■□□□□ 0.49
MSH2-206ENST00000543555 FYB1O15117 783 aa18.12■□□□□ 0.49
MSH2-206ENST00000543555 NEUROD2Q15784 382 aa18.12■□□□□ 0.49
MSH2-206ENST00000543555 HDGFL2Q7Z4V5 671 aaPredicted RBP18.12■□□□□ 0.49
MSH2-206ENST00000543555 ADAMTSL3P82987 1691 aa18.12■□□□□ 0.49
MSH2-206ENST00000543555 BCAR3O75815 825 aa18.12■□□□□ 0.49
MSH2-206ENST00000543555 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
MSH2-206ENST00000543555 MS4A1P11836 297 aa18.11■□□□□ 0.49
MSH2-206ENST00000543555 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
MSH2-206ENST00000543555 KDM2BQ8NHM5 1336 aa18.11■□□□□ 0.49
MSH2-206ENST00000543555 U2AF1L5P0DN76 240 aaPredicted RBP18.11■□□□□ 0.49
MSH2-206ENST00000543555 U2AF1Q01081 240 aaKnown RBP eCLIP18.11■□□□□ 0.49
MSH2-206ENST00000543555 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
MSH2-206ENST00000543555 NRXN3Q9Y4C0 1643 aa18.11■□□□□ 0.49
MSH2-206ENST00000543555 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
MSH2-206ENST00000543555 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
MSH2-206ENST00000543555 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
MSH2-206ENST00000543555 WAPLQ7Z5K2 1190 aa18.1■□□□□ 0.49
MSH2-206ENST00000543555 ADGRB2O60241 1585 aa18.09■□□□□ 0.49
MSH2-206ENST00000543555 TMEM2Q9UHN6 1383 aa18.09■□□□□ 0.49
MSH2-206ENST00000543555 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
MSH2-206ENST00000543555 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.49
MSH2-206ENST00000543555 ERICH6Q7L0X2 663 aa18.08■□□□□ 0.48
MSH2-206ENST00000543555 CENPQQ7L2Z9 268 aaPredicted RBP18.08■□□□□ 0.48
MSH2-206ENST00000543555 EID1Q9Y6B2 187 aa18.07■□□□□ 0.48
MSH2-206ENST00000543555 ATP7BP35670 1465 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms