RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 FAM184AQ8NB25 1140 aa16.85■□□□□ 0.29
RPS6KC1-206ENST00000543354 MVPQ14764 893 aaKnown RBP16.85■□□□□ 0.29
RPS6KC1-206ENST00000543354 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
RPS6KC1-206ENST00000543354 SMC3Q9UQE7 1217 aa16.85■□□□□ 0.29
RPS6KC1-206ENST00000543354 IGHDP01880 384 aa16.84■□□□□ 0.29
RPS6KC1-206ENST00000543354 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
RPS6KC1-206ENST00000543354 FIBPO43427 364 aa16.83■□□□□ 0.29
RPS6KC1-206ENST00000543354 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
RPS6KC1-206ENST00000543354 HDGFP51858 240 aaKnown RBP16.83■□□□□ 0.28
RPS6KC1-206ENST00000543354 GNAI1P63096 354 aa16.83■□□□□ 0.28
RPS6KC1-206ENST00000543354 DUSP27Q5VZP5 1158 aa16.83■□□□□ 0.28
RPS6KC1-206ENST00000543354 NCOA1Q15788 1441 aa16.82■□□□□ 0.28
RPS6KC1-206ENST00000543354 PANK2Q9BZ23 570 aa16.82■□□□□ 0.28
RPS6KC1-206ENST00000543354 PRG4Q92954 1404 aaPredicted RBP16.82■□□□□ 0.28
RPS6KC1-206ENST00000543354 NPHP1O15259 732 aa16.81■□□□□ 0.28
RPS6KC1-206ENST00000543354 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
RPS6KC1-206ENST00000543354 K7ELQ4 463 aaPredicted RBP16.81■□□□□ 0.28
RPS6KC1-206ENST00000543354 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
RPS6KC1-206ENST00000543354 THUMPD2Q9BTF0 503 aaKnown RBP16.81■□□□□ 0.28
RPS6KC1-206ENST00000543354 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
RPS6KC1-206ENST00000543354 AAMPQ13685 434 aa16.81■□□□□ 0.28
RPS6KC1-206ENST00000543354 TOMM22Q9NS69 142 aa16.81■□□□□ 0.28
RPS6KC1-206ENST00000543354 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
RPS6KC1-206ENST00000543354 TMEM57Q8N5G2 664 aa16.8■□□□□ 0.28
RPS6KC1-206ENST00000543354 C9orf78Q9NZ63 289 aaPredicted RBP16.8■□□□□ 0.28
RPS6KC1-206ENST00000543354 TPM4P67936 248 aa16.79■□□□□ 0.28
RPS6KC1-206ENST00000543354 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
RPS6KC1-206ENST00000543354 TWISTNBQ3B726 338 aaPredicted RBP16.79■□□□□ 0.28
RPS6KC1-206ENST00000543354 TSPYL4Q9UJ04 414 aa16.79■□□□□ 0.28
RPS6KC1-206ENST00000543354 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
RPS6KC1-206ENST00000543354 TPM2P07951 284 aa16.77■□□□□ 0.28
RPS6KC1-206ENST00000543354 RARSP54136 660 aaKnown RBP16.77■□□□□ 0.28
RPS6KC1-206ENST00000543354 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.28
RPS6KC1-206ENST00000543354 HOMER1Q86YM7 354 aa16.77■□□□□ 0.28
RPS6KC1-206ENST00000543354 RABEP1Q15276 862 aa16.77■□□□□ 0.27
RPS6KC1-206ENST00000543354 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
RPS6KC1-206ENST00000543354 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
RPS6KC1-206ENST00000543354 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
RPS6KC1-206ENST00000543354 TEFQ10587 303 aa16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 UQCRHLA0A096LP55 91 aa16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 UQCRHP07919 91 aa16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 ERBINQ96RT1 1412 aa16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 TAF7LQ5H9L4 462 aa16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 SYCE3A1L190 88 aa16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
RPS6KC1-206ENST00000543354 SSFA2P28290 1259 aa16.74■□□□□ 0.27
RPS6KC1-206ENST00000543354 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
RPS6KC1-206ENST00000543354 TRIM5Q9C035 493 aa16.74■□□□□ 0.27
RPS6KC1-206ENST00000543354 RRP9O43818 475 aaKnown RBP16.74■□□□□ 0.27
RPS6KC1-206ENST00000543354 MBD3O95983 291 aa16.74■□□□□ 0.27
RPS6KC1-206ENST00000543354 FMNL2Q96PY5 1086 aa16.74■□□□□ 0.27
RPS6KC1-206ENST00000543354 PRDM10Q9NQV6 1147 aa16.74■□□□□ 0.27
RPS6KC1-206ENST00000543354 SASS6Q6UVJ0 657 aa16.73■□□□□ 0.27
RPS6KC1-206ENST00000543354 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
RPS6KC1-206ENST00000543354 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
RPS6KC1-206ENST00000543354 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
RPS6KC1-206ENST00000543354 TNPO1Q92973 898 aaKnown RBP16.73■□□□□ 0.27
RPS6KC1-206ENST00000543354 TSPY26PQ9H489 355 aa16.73■□□□□ 0.27
RPS6KC1-206ENST00000543354 DAPK1P53355 1430 aa16.73■□□□□ 0.27
RPS6KC1-206ENST00000543354 XRCC6P12956 609 aaKnown RBP eCLIP16.72■□□□□ 0.273e-6■■■■□ 23
RPS6KC1-206ENST00000543354 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
RPS6KC1-206ENST00000543354 SEC24BO95487 1268 aa16.72■□□□□ 0.27
RPS6KC1-206ENST00000543354 ZSCAN30Q86W11 494 aa16.72■□□□□ 0.27
RPS6KC1-206ENST00000543354 WDR63Q8IWG1 891 aa16.72■□□□□ 0.27
RPS6KC1-206ENST00000543354 GCC1Q96CN9 775 aa16.72■□□□□ 0.27
RPS6KC1-206ENST00000543354 KIF3AQ9Y496 699 aa16.71■□□□□ 0.27
RPS6KC1-206ENST00000543354 SLC4A2P04920 1241 aa16.71■□□□□ 0.27
RPS6KC1-206ENST00000543354 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
RPS6KC1-206ENST00000543354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPS6KC1-206ENST00000543354 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
RPS6KC1-206ENST00000543354 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
RPS6KC1-206ENST00000543354 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 CDK13Q14004 1512 aaKnown RBP16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 RASSF8Q8NHQ8 419 aa16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 MAP7D2Q96T17 732 aa16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 KDM4AO75164 1064 aa16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 NESP48681 1621 aa16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 AIMP1Q12904 312 aaKnown RBP16.7■□□□□ 0.26
RPS6KC1-206ENST00000543354 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
RPS6KC1-206ENST00000543354 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
RPS6KC1-206ENST00000543354 TMPOP42166 694 aaKnown RBP16.69■□□□□ 0.26
RPS6KC1-206ENST00000543354 IL1RAPL2Q9NP60 686 aa16.69■□□□□ 0.26
RPS6KC1-206ENST00000543354 PDE4CQ08493 712 aa16.68■□□□□ 0.26
RPS6KC1-206ENST00000543354 GDPD2Q9HCC8 539 aa16.68■□□□□ 0.26
RPS6KC1-206ENST00000543354 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
RPS6KC1-206ENST00000543354 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
RPS6KC1-206ENST00000543354 SDF4Q9BRK5 362 aa16.68■□□□□ 0.26
RPS6KC1-206ENST00000543354 EXOC6BQ9Y2D4 811 aa16.68■□□□□ 0.26
RPS6KC1-206ENST00000543354 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
RPS6KC1-206ENST00000543354 PRAM1Q96QH2 718 aa16.67■□□□□ 0.26
RPS6KC1-206ENST00000543354 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
RPS6KC1-206ENST00000543354 TPD52L1Q16890 204 aaPredicted RBP16.67■□□□□ 0.26
RPS6KC1-206ENST00000543354 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
RPS6KC1-206ENST00000543354 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
RPS6KC1-206ENST00000543354 GOLGA6L1Q8N7Z2 621 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms