RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 E9PCH4 1651 aa14.36□□□□□ -0.11
CDH4-201ENST00000543233 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
CDH4-201ENST00000543233 PRDM15P57071 1507 aaPredicted RBP14.35□□□□□ -0.11
CDH4-201ENST00000543233 MAGI2Q86UL8 1455 aa14.35□□□□□ -0.11
CDH4-201ENST00000543233 ERBB4Q15303 1308 aa14.35□□□□□ -0.11
CDH4-201ENST00000543233 CDCA8Q53HL2 280 aa14.35□□□□□ -0.11
CDH4-201ENST00000543233 CD109Q6YHK3 1445 aa14.35□□□□□ -0.11
CDH4-201ENST00000543233 ZNF830Q96NB3 372 aaPredicted RBP14.33□□□□□ -0.11
CDH4-201ENST00000543233 NEUROD2Q15784 382 aa14.33□□□□□ -0.12
CDH4-201ENST00000543233 MAP7D2Q96T17 732 aa14.33□□□□□ -0.12
CDH4-201ENST00000543233 STK26Q9P289 416 aa14.33□□□□□ -0.12
CDH4-201ENST00000543233 CLTCL1P53675 1640 aa14.33□□□□□ -0.12
CDH4-201ENST00000543233 PPP4R3BQ5MIZ7 849 aa14.32□□□□□ -0.12
CDH4-201ENST00000543233 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
CDH4-201ENST00000543233 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
CDH4-201ENST00000543233 SLC12A5Q9H2X9 1139 aa14.31□□□□□ -0.12
CDH4-201ENST00000543233 NOS1P29475 1434 aa14.31□□□□□ -0.12
CDH4-201ENST00000543233 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
CDH4-201ENST00000543233 PTPRTO14522 1441 aa14.3□□□□□ -0.12
CDH4-201ENST00000543233 CARD14Q9BXL6 1004 aa14.3□□□□□ -0.12
CDH4-201ENST00000543233 TRPM2O94759 1503 aa14.3□□□□□ -0.12
CDH4-201ENST00000543233 EIF3AQ14152 1382 aaKnown RBP14.29□□□□□ -0.12
CDH4-201ENST00000543233 APAF1O14727 1248 aa14.29□□□□□ -0.12
CDH4-201ENST00000543233 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
CDH4-201ENST00000543233 RNF123Q5XPI4 1314 aa14.29□□□□□ -0.12
CDH4-201ENST00000543233 C20orf194Q5TEA3 1177 aa14.29□□□□□ -0.12
CDH4-201ENST00000543233 FTSJ3Q8IY81 847 aaKnown RBP14.28□□□□□ -0.12
CDH4-201ENST00000543233 CRBNQ96SW2 442 aa14.28□□□□□ -0.12
CDH4-201ENST00000543233 TMEM51Q9NW97 253 aa14.28□□□□□ -0.12
CDH4-201ENST00000543233 RIPK4P57078 832 aa14.28□□□□□ -0.12
CDH4-201ENST00000543233 MLECQ14165 292 aa14.27□□□□□ -0.12
CDH4-201ENST00000543233 MADDQ8WXG6 1647 aa14.27□□□□□ -0.12
CDH4-201ENST00000543233 MRE11P49959 708 aa14.27□□□□□ -0.13
CDH4-201ENST00000543233 PDE3BQ13370 1112 aa14.27□□□□□ -0.13
CDH4-201ENST00000543233 E9PSI1 815 aa14.26□□□□□ -0.13
CDH4-201ENST00000543233 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
CDH4-201ENST00000543233 RRP7AQ9Y3A4 280 aaKnown RBP14.26□□□□□ -0.13
CDH4-201ENST00000543233 DNTTIP2Q5QJE6 756 aaKnown RBP14.26□□□□□ -0.13
CDH4-201ENST00000543233 DMTNQ08495 405 aa14.26□□□□□ -0.13
CDH4-201ENST00000543233 PLEKHH1Q9ULM0 1364 aa14.26□□□□□ -0.13
CDH4-201ENST00000543233 SPHKAPQ2M3C7 1700 aa14.26□□□□□ -0.13
CDH4-201ENST00000543233 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
CDH4-201ENST00000543233 SPRYD3Q8NCJ5 442 aa14.25□□□□□ -0.13
CDH4-201ENST00000543233 ABCA9Q8IUA7 1624 aa14.25□□□□□ -0.13
CDH4-201ENST00000543233 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
CDH4-201ENST00000543233 MORC1Q86VD1 984 aa14.24□□□□□ -0.13
CDH4-201ENST00000543233 MSNP26038 577 aaKnown RBP14.24□□□□□ -0.13
CDH4-201ENST00000543233 GRPEL1Q9HAV7 217 aa14.24□□□□□ -0.13
CDH4-201ENST00000543233 NPATQ14207 1427 aa14.24□□□□□ -0.13
CDH4-201ENST00000543233 INO80Q9ULG1 1556 aaPredicted RBP14.24□□□□□ -0.13
CDH4-201ENST00000543233 CABP2Q9NPB3 220 aa14.24□□□□□ -0.13
CDH4-201ENST00000543233 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
CDH4-201ENST00000543233 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
CDH4-201ENST00000543233 TET3O43151 1660 aa14.23□□□□□ -0.13
CDH4-201ENST00000543233 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
CDH4-201ENST00000543233 BECN1Q14457 450 aa14.23□□□□□ -0.13
CDH4-201ENST00000543233 ARAP3Q8WWN8 1544 aa14.22□□□□□ -0.13
CDH4-201ENST00000543233 UQCRHLA0A096LP55 91 aa14.22□□□□□ -0.13
CDH4-201ENST00000543233 UQCRHP07919 91 aa14.22□□□□□ -0.13
CDH4-201ENST00000543233 IDI1Q13907 227 aa14.22□□□□□ -0.13
CDH4-201ENST00000543233 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.22□□□□□ -0.13
CDH4-201ENST00000543233 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
CDH4-201ENST00000543233 FSD2A1L4K1 749 aa14.22□□□□□ -0.13
CDH4-201ENST00000543233 ZBTB22O15209 634 aa14.22□□□□□ -0.13
CDH4-201ENST00000543233 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
CDH4-201ENST00000543233 DMRT2Q9Y5R5 561 aa14.21□□□□□ -0.13
CDH4-201ENST00000543233 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.13
CDH4-201ENST00000543233 UTP14CQ5TAP6 766 aaKnown RBP14.2□□□□□ -0.14
CDH4-201ENST00000543233 SECISBP2LQ93073 1101 aaKnown RBP14.2□□□□□ -0.14
CDH4-201ENST00000543233 POGZQ7Z3K3 1410 aa14.2□□□□□ -0.14
CDH4-201ENST00000543233 DUSP27Q5VZP5 1158 aa14.2□□□□□ -0.14
CDH4-201ENST00000543233 SRPK2P78362 688 aaKnown RBP14.19□□□□□ -0.14
CDH4-201ENST00000543233 ERVK-7P63135 1459 aa14.19□□□□□ -0.14
CDH4-201ENST00000543233 MROH1Q8NDA8 1641 aa14.19□□□□□ -0.14
CDH4-201ENST00000543233 C14orf93Q9H972 538 aaKnown RBP14.19□□□□□ -0.14
CDH4-201ENST00000543233 RNF17Q9BXT8 1623 aaKnown RBP14.19□□□□□ -0.14
CDH4-201ENST00000543233 ASXL1Q8IXJ9 1541 aa14.19□□□□□ -0.14
CDH4-201ENST00000543233 CGNQ9P2M7 1197 aaKnown RBP14.19□□□□□ -0.14
CDH4-201ENST00000543233 BLMP54132 1417 aaPredicted RBP14.19□□□□□ -0.14
CDH4-201ENST00000543233 MINK1Q8N4C8 1332 aaPredicted RBP14.18□□□□□ -0.14
CDH4-201ENST00000543233 CEP152O94986 1710 aa14.18□□□□□ -0.14
CDH4-201ENST00000543233 LAMC1P11047 1609 aa14.18□□□□□ -0.14
CDH4-201ENST00000543233 PPRC1Q5VV67 1664 aaKnown RBP14.18□□□□□ -0.14
CDH4-201ENST00000543233 EFCAB6Q5THR3 1501 aa14.18□□□□□ -0.14
CDH4-201ENST00000543233 NSD3Q9BZ95 1437 aa14.18□□□□□ -0.14
CDH4-201ENST00000543233 BCAR3O75815 825 aa14.18□□□□□ -0.14
CDH4-201ENST00000543233 TSPOAP1O95153 1857 aa14.17□□□□□ -0.14
CDH4-201ENST00000543233 CBX1P83916 185 aa14.17□□□□□ -0.14
CDH4-201ENST00000543233 MTERF4Q7Z6M4 381 aaKnown RBP14.17□□□□□ -0.14
CDH4-201ENST00000543233 DEPDC5O75140 1603 aa14.17□□□□□ -0.14
CDH4-201ENST00000543233 TRAK2O60296 914 aa14.17□□□□□ -0.14
CDH4-201ENST00000543233 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 VGFO15240 615 aaPredicted RBP14.16□□□□□ -0.14
CDH4-201ENST00000543233 OFD1O75665 1012 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 MTHFSP49914 203 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 AEBP1Q8IUX7 1158 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 ABCA6Q8N139 1617 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 IQGAP1P46940 1657 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 ZBTB7CA1YPR0 619 aa14.16□□□□□ -0.14
CDH4-201ENST00000543233 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms