RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 PTCH1Q13635 1447 aa14.21□□□□□ -0.13
TNFRSF1A-214ENST00000543048 CFAP70Q5T0N1 1121 aa14.2□□□□□ -0.14
TNFRSF1A-214ENST00000543048 DCAF11Q8TEB1 546 aa14.2□□□□□ -0.14
TNFRSF1A-214ENST00000543048 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
TNFRSF1A-214ENST00000543048 PIK3C2GO75747 1445 aa14.2□□□□□ -0.14
TNFRSF1A-214ENST00000543048 ADGRL3Q9HAR2 1447 aa14.2□□□□□ -0.14
TNFRSF1A-214ENST00000543048 NALCNQ8IZF0 1738 aa14.2□□□□□ -0.14
TNFRSF1A-214ENST00000543048 PRAG1Q86YV5 1406 aa14.19□□□□□ -0.14
TNFRSF1A-214ENST00000543048 LRPPRCP42704 1394 aaKnown RBP14.19□□□□□ -0.14
TNFRSF1A-214ENST00000543048 ABCC11Q96J66 1382 aa14.19□□□□□ -0.14
TNFRSF1A-214ENST00000543048 MYOM2P54296 1465 aa14.18□□□□□ -0.14
TNFRSF1A-214ENST00000543048 NRXN1Q9ULB1 1477 aa14.18□□□□□ -0.14
TNFRSF1A-214ENST00000543048 MED1Q15648 1581 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-214ENST00000543048 BRINP3Q76B58 766 aa14.18□□□□□ -0.14
TNFRSF1A-214ENST00000543048 WAPLQ7Z5K2 1190 aa14.18□□□□□ -0.14
TNFRSF1A-214ENST00000543048 SIRT1Q96EB6 747 aa14.18□□□□□ -0.14
TNFRSF1A-214ENST00000543048 MST1RQ04912 1400 aa14.17□□□□□ -0.14
TNFRSF1A-214ENST00000543048 ILDR2Q71H61 639 aa14.17□□□□□ -0.14
TNFRSF1A-214ENST00000543048 DHX57Q6P158 1386 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-214ENST00000543048 YTHDC2Q9H6S0 1430 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1A-214ENST00000543048 KNDC1Q76NI1 1749 aa14.16□□□□□ -0.14
TNFRSF1A-214ENST00000543048 LAMC1P11047 1609 aa14.15□□□□□ -0.14
TNFRSF1A-214ENST00000543048 TECPR2O15040 1411 aa14.15□□□□□ -0.14
TNFRSF1A-214ENST00000543048 JCADQ9P266 1359 aa14.14□□□□□ -0.15
TNFRSF1A-214ENST00000543048 AHDC1Q5TGY3 1603 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1A-214ENST00000543048 ASXL1Q8IXJ9 1541 aa14.14□□□□□ -0.15
TNFRSF1A-214ENST00000543048 COL16A1Q07092 1604 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF1A-214ENST00000543048 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
TNFRSF1A-214ENST00000543048 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-214ENST00000543048 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
TNFRSF1A-214ENST00000543048 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-214ENST00000543048 ORAI2Q96SN7 254 aa14.11□□□□□ -0.15
TNFRSF1A-214ENST00000543048 PLEKHH1Q9ULM0 1364 aa14.1□□□□□ -0.15
TNFRSF1A-214ENST00000543048 POGKQ9P215 609 aa14.1□□□□□ -0.15
TNFRSF1A-214ENST00000543048 ESCO1Q5FWF5 840 aa14.09□□□□□ -0.15
TNFRSF1A-214ENST00000543048 DDX17Q92841 729 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-214ENST00000543048 PRAM1Q96QH2 718 aa14.09□□□□□ -0.15
TNFRSF1A-214ENST00000543048 TRAK1Q9UPV9 953 aa14.09□□□□□ -0.15
TNFRSF1A-214ENST00000543048 SHPRHQ149N8 1683 aa14.09□□□□□ -0.15
TNFRSF1A-214ENST00000543048 SPATA31A6Q5VVP1 1343 aa14.09□□□□□ -0.15
TNFRSF1A-214ENST00000543048 RGPD8O14715 1765 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-214ENST00000543048 CDC42BPGQ6DT37 1551 aa14.08□□□□□ -0.16
TNFRSF1A-214ENST00000543048 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
TNFRSF1A-214ENST00000543048 SAFB2Q14151 953 aaKnown RBP eCLIP14.07□□□□□ -0.16
TNFRSF1A-214ENST00000543048 POLA2Q14181 598 aa14.07□□□□□ -0.16
TNFRSF1A-214ENST00000543048 SIN3AQ96ST3 1273 aa14.07□□□□□ -0.16
TNFRSF1A-214ENST00000543048 DLC1Q96QB1 1528 aa14.06□□□□□ -0.16
TNFRSF1A-214ENST00000543048 ADGRB1O14514 1584 aa14.06□□□□□ -0.16
TNFRSF1A-214ENST00000543048 RGS17Q9UGC6 210 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-214ENST00000543048 FMN2Q9NZ56 1722 aa14.06□□□□□ -0.16
TNFRSF1A-214ENST00000543048 KIAA1210Q9ULL0 1709 aa14.06□□□□□ -0.16
TNFRSF1A-214ENST00000543048 SOCS7O14512 581 aa14.05□□□□□ -0.16
TNFRSF1A-214ENST00000543048 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
TNFRSF1A-214ENST00000543048 SOS2Q07890 1332 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-214ENST00000543048 NUTM2BA6NNL0 878 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-214ENST00000543048 NUTM2EB1AL46 878 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-214ENST00000543048 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1A-214ENST00000543048 NUTM2AQ8IVF1 878 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-214ENST00000543048 L3MBTL2Q969R5 705 aa14.04□□□□□ -0.16
TNFRSF1A-214ENST00000543048 FOXO3O43524 673 aa14.03□□□□□ -0.16
TNFRSF1A-214ENST00000543048 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
TNFRSF1A-214ENST00000543048 MINK1Q8N4C8 1332 aaPredicted RBP14.01□□□□□ -0.17
TNFRSF1A-214ENST00000543048 NBPF1Q3BBV0 1214 aa14.01□□□□□ -0.17
TNFRSF1A-214ENST00000543048 POTEAQ6S8J7 498 aa14□□□□□ -0.17
TNFRSF1A-214ENST00000543048 HIRIP3Q9BW71 556 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-214ENST00000543048 PHF8Q9UPP1 1060 aa14□□□□□ -0.17
TNFRSF1A-214ENST00000543048 ARHGEF28Q8N1W1 1705 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-214ENST00000543048 LRP6O75581 1613 aa14□□□□□ -0.17
TNFRSF1A-214ENST00000543048 PNPLA6Q8IY17 1366 aa13.99□□□□□ -0.17
TNFRSF1A-214ENST00000543048 KIF1AQ12756 1690 aa13.99□□□□□ -0.17
TNFRSF1A-214ENST00000543048 WASLO00401 505 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-214ENST00000543048 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-214ENST00000543048 PSME1Q06323 249 aa13.98□□□□□ -0.17
TNFRSF1A-214ENST00000543048 ZNF772Q68DY9 489 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-214ENST00000543048 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
TNFRSF1A-214ENST00000543048 ADGRB2O60241 1585 aa13.97□□□□□ -0.17
TNFRSF1A-214ENST00000543048 PXDNQ92626 1479 aa13.96□□□□□ -0.17
TNFRSF1A-214ENST00000543048 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.18
TNFRSF1A-214ENST00000543048 EIF3AQ14152 1382 aaKnown RBP13.96□□□□□ -0.18
TNFRSF1A-214ENST00000543048 USP32Q8NFA0 1604 aa13.95□□□□□ -0.18
TNFRSF1A-214ENST00000543048 PMFBP1Q8TBY8 1022 aa13.95□□□□□ -0.18
TNFRSF1A-214ENST00000543048 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-214ENST00000543048 ADAMTS2O95450 1211 aa13.94□□□□□ -0.18
TNFRSF1A-214ENST00000543048 NGLY1Q96IV0 654 aa13.94□□□□□ -0.18
TNFRSF1A-214ENST00000543048 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
TNFRSF1A-214ENST00000543048 CDK19Q9BWU1 502 aa13.94□□□□□ -0.18
TNFRSF1A-214ENST00000543048 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
TNFRSF1A-214ENST00000543048 NUDT16Q96DE0 195 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-214ENST00000543048 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
TNFRSF1A-214ENST00000543048 AFF2P51816 1311 aa13.92□□□□□ -0.18
TNFRSF1A-214ENST00000543048 PRR36Q9H6K5 1346 aa13.92□□□□□ -0.18
TNFRSF1A-214ENST00000543048 MARF1Q9Y4F3 1742 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-214ENST00000543048 CENPJQ9HC77 1338 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-214ENST00000543048 TULP4Q9NRJ4 1543 aa13.91□□□□□ -0.18
TNFRSF1A-214ENST00000543048 ITSN1Q15811 1721 aa13.91□□□□□ -0.18
TNFRSF1A-214ENST00000543048 NBPF8Q3BBV2 869 aa13.91□□□□□ -0.18
TNFRSF1A-214ENST00000543048 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-214ENST00000543048 SBNO1A3KN83 1393 aa13.91□□□□□ -0.18
TNFRSF1A-214ENST00000543048 RXRBP28702 533 aa13.9□□□□□ -0.18
TNFRSF1A-214ENST00000543048 LMOD2Q6P5Q4 547 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms