RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 WWC1Q8IX03 1113 aa14.12□□□□□ -0.15
CALU-206ENST00000542996 NSD3Q9BZ95 1437 aa14.11□□□□□ -0.15
CALU-206ENST00000542996 IL27Q8NEV9 243 aa14.11□□□□□ -0.15
CALU-206ENST00000542996 LAS1LQ9Y4W2 734 aaKnown RBP14.11□□□□□ -0.15
CALU-206ENST00000542996 ADGRB2O60241 1585 aa14.11□□□□□ -0.15
CALU-206ENST00000542996 MED14O60244 1454 aa14.1□□□□□ -0.15
CALU-206ENST00000542996 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
CALU-206ENST00000542996 NPC1L1Q9UHC9 1359 aa14.1□□□□□ -0.15
CALU-206ENST00000542996 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
CALU-206ENST00000542996 FBXO31Q5XUX0 539 aaPredicted RBP14.1□□□□□ -0.15
CALU-206ENST00000542996 C14orf93Q9H972 538 aaKnown RBP14.09□□□□□ -0.15
CALU-206ENST00000542996 NRXN3Q9Y4C0 1643 aa14.08□□□□□ -0.16
CALU-206ENST00000542996 IDI1Q13907 227 aa14.08□□□□□ -0.16
CALU-206ENST00000542996 PLEKHF1Q96S99 279 aa14.08□□□□□ -0.16
CALU-206ENST00000542996 USP32Q8NFA0 1604 aa14.07□□□□□ -0.16
CALU-206ENST00000542996 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
CALU-206ENST00000542996 SAFB2Q14151 953 aaKnown RBP eCLIP14.07□□□□□ -0.16
CALU-206ENST00000542996 GGT6Q6P531 493 aa14.06□□□□□ -0.16
CALU-206ENST00000542996 MLH3Q9UHC1 1453 aa14.06□□□□□ -0.16
CALU-206ENST00000542996 PREX1Q8TCU6 1659 aa14.06□□□□□ -0.16
CALU-206ENST00000542996 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
CALU-206ENST00000542996 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
CALU-206ENST00000542996 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
CALU-206ENST00000542996 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
CALU-206ENST00000542996 NKTRP30414 1462 aaKnown RBP14.05□□□□□ -0.16
CALU-206ENST00000542996 PDE3BQ13370 1112 aa14.05□□□□□ -0.16
CALU-206ENST00000542996 TRIM35Q9UPQ4 493 aa14.05□□□□□ -0.16
CALU-206ENST00000542996 KNDC1Q76NI1 1749 aa14.05□□□□□ -0.16
CALU-206ENST00000542996 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
CALU-206ENST00000542996 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
CALU-206ENST00000542996 A0A1W2PP64 1363 aa14.04□□□□□ -0.16
CALU-206ENST00000542996 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
CALU-206ENST00000542996 MTHFSP49914 203 aa14.04□□□□□ -0.16
CALU-206ENST00000542996 NEUROD2Q15784 382 aa14.04□□□□□ -0.16
CALU-206ENST00000542996 MAP2P11137 1827 aaKnown RBP14.03□□□□□ -0.16
CALU-206ENST00000542996 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
CALU-206ENST00000542996 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
CALU-206ENST00000542996 GOLGA2Q08379 1002 aa14.02□□□□□ -0.16
CALU-206ENST00000542996 COG6Q9Y2V7 657 aa14.02□□□□□ -0.16
CALU-206ENST00000542996 SRCAPQ6ZRS2 3230 aa14.02□□□□□ -0.16
CALU-206ENST00000542996 RARSP54136 660 aaKnown RBP14.01□□□□□ -0.17
CALU-206ENST00000542996 TCP11L2Q8N4U5 519 aa14.01□□□□□ -0.17
CALU-206ENST00000542996 MYT1Q01538 1121 aa14□□□□□ -0.17
CALU-206ENST00000542996 CLTCQ00610 1675 aaKnown RBP14□□□□□ -0.17
CALU-206ENST00000542996 TSPOAP1O95153 1857 aa13.99□□□□□ -0.17
CALU-206ENST00000542996 ANKRD26Q9UPS8 1709 aa13.99□□□□□ -0.17
CALU-206ENST00000542996 CENPJQ9HC77 1338 aaPredicted RBP13.98□□□□□ -0.17
CALU-206ENST00000542996 ARHGEF40Q8TER5 1519 aa13.98□□□□□ -0.17
CALU-206ENST00000542996 TCERG1O14776 1098 aaKnown RBP13.98□□□□□ -0.17
CALU-206ENST00000542996 FYB1O15117 783 aa13.97□□□□□ -0.17
CALU-206ENST00000542996 RGS3P49796 1198 aa13.97□□□□□ -0.17
CALU-206ENST00000542996 GGNBP2Q9H3C7 697 aa13.96□□□□□ -0.17
CALU-206ENST00000542996 PHACTR3Q96KR7 559 aa13.96□□□□□ -0.18
CALU-206ENST00000542996 RIMS1Q86UR5 1692 aaKnown RBP13.95□□□□□ -0.18
CALU-206ENST00000542996 CLUAP1Q96AJ1 413 aa13.95□□□□□ -0.18
CALU-206ENST00000542996 CPS1P31327 1500 aa13.95□□□□□ -0.18
CALU-206ENST00000542996 EIF3AQ14152 1382 aaKnown RBP13.95□□□□□ -0.18
CALU-206ENST00000542996 PCNTO95613 3336 aa13.95□□□□□ -0.18
CALU-206ENST00000542996 ALKQ9UM73 1620 aa13.95□□□□□ -0.18
CALU-206ENST00000542996 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
CALU-206ENST00000542996 ATAD2Q6PL18 1390 aa13.95□□□□□ -0.18
CALU-206ENST00000542996 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
CALU-206ENST00000542996 LRRC7Q96NW7 1537 aa13.94□□□□□ -0.18
CALU-206ENST00000542996 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
CALU-206ENST00000542996 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
CALU-206ENST00000542996 STK26Q9P289 416 aa13.93□□□□□ -0.18
CALU-206ENST00000542996 FRAT2O75474 233 aaPredicted RBP13.92□□□□□ -0.18
CALU-206ENST00000542996 MS4A1P11836 297 aa13.92□□□□□ -0.18
CALU-206ENST00000542996 PEAK1Q9H792 1746 aa13.91□□□□□ -0.18
CALU-206ENST00000542996 ABCC11Q96J66 1382 aa13.91□□□□□ -0.18
CALU-206ENST00000542996 BRPF3Q9ULD4 1205 aa13.91□□□□□ -0.18
CALU-206ENST00000542996 KIF20BQ96Q89 1820 aa13.91□□□□□ -0.18
CALU-206ENST00000542996 AK9Q5TCS8 1911 aa13.91□□□□□ -0.18
CALU-206ENST00000542996 TSPYL6Q8N831 410 aa13.91□□□□□ -0.18
CALU-206ENST00000542996 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
CALU-206ENST00000542996 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
CALU-206ENST00000542996 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
CALU-206ENST00000542996 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
CALU-206ENST00000542996 RGPD8O14715 1765 aaPredicted RBP13.89□□□□□ -0.19
CALU-206ENST00000542996 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.89□□□□□ -0.19
CALU-206ENST00000542996 ANKRD36BQ8N2N9 1353 aa13.89□□□□□ -0.19
CALU-206ENST00000542996 WDR43Q15061 677 aaKnown RBP eCLIP13.89□□□□□ -0.19
CALU-206ENST00000542996 METP08581 1390 aa13.89□□□□□ -0.19
CALU-206ENST00000542996 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
CALU-206ENST00000542996 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
CALU-206ENST00000542996 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
CALU-206ENST00000542996 MINK1Q8N4C8 1332 aaPredicted RBP13.87□□□□□ -0.19
CALU-206ENST00000542996 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
CALU-206ENST00000542996 TRIM27P14373 513 aa13.87□□□□□ -0.19
CALU-206ENST00000542996 CENPQQ7L2Z9 268 aaPredicted RBP13.87□□□□□ -0.19
CALU-206ENST00000542996 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
CALU-206ENST00000542996 ARHGAP31Q2M1Z3 1444 aa13.86□□□□□ -0.19
CALU-206ENST00000542996 FRAT1Q92837 279 aaPredicted RBP13.86□□□□□ -0.19
CALU-206ENST00000542996 RTN4Q9NQC3 1192 aaKnown RBP13.86□□□□□ -0.19
CALU-206ENST00000542996 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
CALU-206ENST00000542996 KANK1Q14678 1352 aa13.85□□□□□ -0.19
CALU-206ENST00000542996 KIF13AQ9H1H9 1805 aa13.85□□□□□ -0.19
CALU-206ENST00000542996 YTHDC2Q9H6S0 1430 aaKnown RBP13.85□□□□□ -0.19
CALU-206ENST00000542996 KIF2CQ99661 725 aa13.85□□□□□ -0.19
CALU-206ENST00000542996 EP400Q96L91 3159 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms