RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 THUMPD2Q9BTF0 503 aaKnown RBP18.02■□□□□ 0.48
GCFC2-211ENST00000541687 MCCP23508 829 aa18.02■□□□□ 0.47
GCFC2-211ENST00000541687 IGHDP01880 384 aa18.01■□□□□ 0.47
GCFC2-211ENST00000541687 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
GCFC2-211ENST00000541687 RARSP54136 660 aaKnown RBP18.01■□□□□ 0.47
GCFC2-211ENST00000541687 CDK19Q9BWU1 502 aa18■□□□□ 0.47
GCFC2-211ENST00000541687 HMMRO75330 724 aa18■□□□□ 0.47
GCFC2-211ENST00000541687 SYCP2Q9BX26 1530 aa18■□□□□ 0.47
GCFC2-211ENST00000541687 FAM135AQ9P2D6 1515 aa17.99■□□□□ 0.47
GCFC2-211ENST00000541687 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
GCFC2-211ENST00000541687 RILPL2Q969X0 211 aa17.99■□□□□ 0.47
GCFC2-211ENST00000541687 ARID3AQ99856 593 aa17.99■□□□□ 0.47
GCFC2-211ENST00000541687 MVPQ14764 893 aaKnown RBP17.99■□□□□ 0.47
GCFC2-211ENST00000541687 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
GCFC2-211ENST00000541687 DNMT1P26358 1616 aaKnown RBP17.99■□□□□ 0.47
GCFC2-211ENST00000541687 SPATA31E1Q6ZUB1 1445 aa17.99■□□□□ 0.47
GCFC2-211ENST00000541687 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
GCFC2-211ENST00000541687 GNAI1P63096 354 aa17.98■□□□□ 0.47
GCFC2-211ENST00000541687 ZRSR1Q15695 479 aaKnown RBP17.98■□□□□ 0.47
GCFC2-211ENST00000541687 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
GCFC2-211ENST00000541687 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
GCFC2-211ENST00000541687 PLEKHH1Q9ULM0 1364 aa17.98■□□□□ 0.47
GCFC2-211ENST00000541687 NUTM2GQ5VZR2 741 aa17.97■□□□□ 0.47
GCFC2-211ENST00000541687 FBLN1P23142 703 aa17.97■□□□□ 0.47
GCFC2-211ENST00000541687 NAP1L2Q9ULW6 460 aaPredicted RBP17.97■□□□□ 0.47
GCFC2-211ENST00000541687 TMPOP42166 694 aaKnown RBP17.97■□□□□ 0.47
GCFC2-211ENST00000541687 FGD1P98174 961 aa17.97■□□□□ 0.47
GCFC2-211ENST00000541687 DDX49Q9Y6V7 483 aaKnown RBP17.97■□□□□ 0.47
GCFC2-211ENST00000541687 SCAF11Q99590 1463 aaKnown RBP17.96■□□□□ 0.47
GCFC2-211ENST00000541687 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
GCFC2-211ENST00000541687 EID1Q9Y6B2 187 aa17.96■□□□□ 0.47
GCFC2-211ENST00000541687 MSNP26038 577 aaKnown RBP17.95■□□□□ 0.46
GCFC2-211ENST00000541687 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
GCFC2-211ENST00000541687 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
GCFC2-211ENST00000541687 RRS1Q15050 365 aaKnown RBP17.95■□□□□ 0.46
GCFC2-211ENST00000541687 WAPLQ7Z5K2 1190 aa17.95■□□□□ 0.46
GCFC2-211ENST00000541687 SSH1Q8WYL5 1049 aa17.95■□□□□ 0.46
GCFC2-211ENST00000541687 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
GCFC2-211ENST00000541687 TMEM57Q8N5G2 664 aa17.94■□□□□ 0.46
GCFC2-211ENST00000541687 CFAP44Q96MT7 982 aa17.94■□□□□ 0.46
GCFC2-211ENST00000541687 TRAPPC8Q9Y2L5 1435 aa17.94■□□□□ 0.46
GCFC2-211ENST00000541687 DDX11L8A8MPP1 907 aa17.94■□□□□ 0.46
GCFC2-211ENST00000541687 NOS1P29475 1434 aa17.94■□□□□ 0.46
GCFC2-211ENST00000541687 EIF2S2P20042 333 aaKnown RBP17.94■□□□□ 0.46
GCFC2-211ENST00000541687 LRPPRCP42704 1394 aaKnown RBP17.94■□□□□ 0.46
GCFC2-211ENST00000541687 TWISTNBQ3B726 338 aaPredicted RBP17.93■□□□□ 0.46
GCFC2-211ENST00000541687 ITSN2Q9NZM3 1697 aa17.93■□□□□ 0.46
GCFC2-211ENST00000541687 IDI1Q13907 227 aa17.93■□□□□ 0.46
GCFC2-211ENST00000541687 CARD14Q9BXL6 1004 aa17.93■□□□□ 0.46
GCFC2-211ENST00000541687 ST18O60284 1047 aa17.92■□□□□ 0.46
GCFC2-211ENST00000541687 ADGRL1O94910 1474 aa17.92■□□□□ 0.46
GCFC2-211ENST00000541687 AAMPQ13685 434 aa17.92■□□□□ 0.46
GCFC2-211ENST00000541687 FKBP5Q13451 457 aaPredicted RBP17.91■□□□□ 0.46
GCFC2-211ENST00000541687 FBXO31Q5XUX0 539 aaPredicted RBP17.91■□□□□ 0.46
GCFC2-211ENST00000541687 TSPYL4Q9UJ04 414 aa17.9■□□□□ 0.46
GCFC2-211ENST00000541687 SULT6B1Q6IMI4 303 aa17.9■□□□□ 0.46
GCFC2-211ENST00000541687 DCTN1Q14203 1278 aa17.89■□□□□ 0.46
GCFC2-211ENST00000541687 SLC52A1Q9NWF4 448 aa17.89■□□□□ 0.46
GCFC2-211ENST00000541687 CDK11BP21127 795 aaKnown RBP17.89■□□□□ 0.45
GCFC2-211ENST00000541687 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
GCFC2-211ENST00000541687 PCDHB15Q9Y5E8 787 aa17.88■□□□□ 0.45
GCFC2-211ENST00000541687 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
GCFC2-211ENST00000541687 A2MP01023 1474 aa17.88■□□□□ 0.45
GCFC2-211ENST00000541687 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
GCFC2-211ENST00000541687 GOLGA6L4A6NEF3 574 aa17.87■□□□□ 0.45
GCFC2-211ENST00000541687 FANCAO15360 1455 aa17.87■□□□□ 0.45
GCFC2-211ENST00000541687 TRAK2O60296 914 aa17.87■□□□□ 0.45
GCFC2-211ENST00000541687 RNF123Q5XPI4 1314 aa17.87■□□□□ 0.45
GCFC2-211ENST00000541687 PLCH2O75038 1416 aa17.86■□□□□ 0.45
GCFC2-211ENST00000541687 ZNF330Q9Y3S2 320 aaPredicted RBP17.86■□□□□ 0.45
GCFC2-211ENST00000541687 TRIM27P14373 513 aa17.86■□□□□ 0.45
GCFC2-211ENST00000541687 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
GCFC2-211ENST00000541687 C14orf93Q9H972 538 aaKnown RBP17.86■□□□□ 0.45
GCFC2-211ENST00000541687 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
GCFC2-211ENST00000541687 ANO2Q9NQ90 1003 aa17.86■□□□□ 0.45
GCFC2-211ENST00000541687 GCC2Q8IWJ2 1684 aa17.86■□□□□ 0.45
GCFC2-211ENST00000541687 RPGRIP1LQ68CZ1 1315 aa17.85■□□□□ 0.45
GCFC2-211ENST00000541687 EMILIN1Q9Y6C2 1016 aa17.85■□□□□ 0.45
GCFC2-211ENST00000541687 CSB-PGBD3P0DP91 1061 aa17.85■□□□□ 0.45
GCFC2-211ENST00000541687 ADGRL2O95490 1459 aa17.85■□□□□ 0.45
GCFC2-211ENST00000541687 ARHGEF12Q9NZN5 1544 aa17.84■□□□□ 0.45
GCFC2-211ENST00000541687 RLBP1P12271 317 aa17.84■□□□□ 0.45
GCFC2-211ENST00000541687 C8orf34Q49A92 452 aa17.84■□□□□ 0.45
GCFC2-211ENST00000541687 CHD1LQ86WJ1 897 aa17.84■□□□□ 0.45
GCFC2-211ENST00000541687 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
GCFC2-211ENST00000541687 CCDC9Q9Y3X0 531 aaKnown RBP17.84■□□□□ 0.45
GCFC2-211ENST00000541687 CD109Q6YHK3 1445 aa17.83■□□□□ 0.45
GCFC2-211ENST00000541687 CDC45O75419 566 aa17.83■□□□□ 0.44
GCFC2-211ENST00000541687 PTMSP20962 102 aa17.83■□□□□ 0.44
GCFC2-211ENST00000541687 MCTP1Q6DN14 999 aa17.83■□□□□ 0.44
GCFC2-211ENST00000541687 NME9Q86XW9 330 aa17.83■□□□□ 0.44
GCFC2-211ENST00000541687 SLC26A8Q96RN1 970 aa17.83■□□□□ 0.44
GCFC2-211ENST00000541687 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
GCFC2-211ENST00000541687 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.44
GCFC2-211ENST00000541687 NLRP6P59044 892 aa17.82■□□□□ 0.44
GCFC2-211ENST00000541687 REC8O95072 547 aa17.82■□□□□ 0.44
GCFC2-211ENST00000541687 ZNF428Q96B54 188 aa17.82■□□□□ 0.44
GCFC2-211ENST00000541687 TULP1O00294 542 aaPredicted RBP17.82■□□□□ 0.44
GCFC2-211ENST00000541687 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
GCFC2-211ENST00000541687 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms