RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 FMN2Q9NZ56 1722 aa29.48■■■□□ 2.31
ATN1-204ENST00000541029 WAPLQ7Z5K2 1190 aa29.45■■■□□ 2.31
ATN1-204ENST00000541029 C14orf93Q9H972 538 aaKnown RBP29.45■■■□□ 2.31
ATN1-204ENST00000541029 CFAP70Q5T0N1 1121 aa29.44■■■□□ 2.3
ATN1-204ENST00000541029 ORAI2Q96SN7 254 aa29.42■■■□□ 2.3
ATN1-204ENST00000541029 ADGRB1O14514 1584 aa29.41■■■□□ 2.3
ATN1-204ENST00000541029 POTEAQ6S8J7 498 aa29.41■■■□□ 2.3
ATN1-204ENST00000541029 RGPD8O14715 1765 aaPredicted RBP29.39■■■□□ 2.3
ATN1-204ENST00000541029 PNPLA6Q8IY17 1366 aa29.39■■■□□ 2.29
ATN1-204ENST00000541029 MEX3CQ5U5Q3 659 aaKnown RBP29.38■■■□□ 2.29
ATN1-204ENST00000541029 DHX57Q6P158 1386 aaKnown RBP29.38■■■□□ 2.29
ATN1-204ENST00000541029 DLC1Q96QB1 1528 aa29.37■■■□□ 2.29
ATN1-204ENST00000541029 LRRC59Q96AG4 307 aaKnown RBP29.37■■■□□ 2.29
ATN1-204ENST00000541029 KIF1AQ12756 1690 aa29.35■■■□□ 2.29
ATN1-204ENST00000541029 NUTM2BA6NNL0 878 aaPredicted RBP29.35■■■□□ 2.29
ATN1-204ENST00000541029 NUTM2EB1AL46 878 aaPredicted RBP29.35■■■□□ 2.29
ATN1-204ENST00000541029 NUTM2AQ8IVF1 878 aaPredicted RBP29.35■■■□□ 2.29
ATN1-204ENST00000541029 DCAF11Q8TEB1 546 aa29.33■■■□□ 2.29
ATN1-204ENST00000541029 KDM2AQ9Y2K7 1162 aa29.33■■■□□ 2.29
ATN1-204ENST00000541029 SOS2Q07890 1332 aaPredicted RBP29.33■■■□□ 2.29
ATN1-204ENST00000541029 COL22A1Q8NFW1 1626 aaPredicted RBP29.33■■■□□ 2.29
ATN1-204ENST00000541029 PXDNQ92626 1479 aa29.32■■■□□ 2.28
ATN1-204ENST00000541029 NUTM2FA1L443 756 aa29.32■■■□□ 2.28
ATN1-204ENST00000541029 ESCO1Q5FWF5 840 aa29.32■■■□□ 2.28
ATN1-204ENST00000541029 SIRT1Q96EB6 747 aa29.31■■■□□ 2.28
ATN1-204ENST00000541029 ADGRB2O60241 1585 aa29.3■■■□□ 2.28
ATN1-204ENST00000541029 ARHGEF28Q8N1W1 1705 aaKnown RBP29.29■■■□□ 2.28
ATN1-204ENST00000541029 PRAM1Q96QH2 718 aa29.28■■■□□ 2.28
ATN1-204ENST00000541029 SAFB2Q14151 953 aaKnown RBP eCLIP29.27■■■□□ 2.28
ATN1-204ENST00000541029 USP32Q8NFA0 1604 aa29.27■■■□□ 2.28
ATN1-204ENST00000541029 NPHP3Q7Z494 1330 aa29.26■■■□□ 2.27
ATN1-204ENST00000541029 KIAA1210Q9ULL0 1709 aa29.25■■■□□ 2.27
ATN1-204ENST00000541029 MARF1Q9Y4F3 1742 aaKnown RBP29.23■■■□□ 2.27
ATN1-204ENST00000541029 XPCQ01831 940 aaPredicted RBP29.22■■■□□ 2.27
ATN1-204ENST00000541029 ZNF772Q68DY9 489 aaPredicted RBP29.22■■■□□ 2.27
ATN1-204ENST00000541029 STAC3Q96MF2 364 aa29.22■■■□□ 2.27
ATN1-204ENST00000541029 FOXO3O43524 673 aa29.21■■■□□ 2.27
ATN1-204ENST00000541029 POGKQ9P215 609 aa29.21■■■□□ 2.27
ATN1-204ENST00000541029 TRAK1Q9UPV9 953 aa29.21■■■□□ 2.27
ATN1-204ENST00000541029 AFF2P51816 1311 aa29.2■■■□□ 2.27
ATN1-204ENST00000541029 C8orf37Q96NL8 207 aa29.18■■■□□ 2.26
ATN1-204ENST00000541029 ADAMTS2O95450 1211 aa29.16■■■□□ 2.26
ATN1-204ENST00000541029 ANKARQ7Z5J8 1434 aa29.15■■■□□ 2.26
ATN1-204ENST00000541029 HIRIP3Q9BW71 556 aaPredicted RBP29.13■■■□□ 2.25
ATN1-204ENST00000541029 TULP4Q9NRJ4 1543 aa29.13■■■□□ 2.25
ATN1-204ENST00000541029 MINK1Q8N4C8 1332 aaPredicted RBP29.12■■■□□ 2.25
ATN1-204ENST00000541029 ABCA3Q99758 1704 aa29.11■■■□□ 2.25
ATN1-204ENST00000541029 PHF8Q9UPP1 1060 aa29.11■■■□□ 2.25
ATN1-204ENST00000541029 ITSN1Q15811 1721 aa29.11■■■□□ 2.25
ATN1-204ENST00000541029 TRPM3Q9HCF6 1732 aaPredicted RBP29.08■■■□□ 2.25
ATN1-204ENST00000541029 TNS3Q68CZ2 1445 aa29.07■■■□□ 2.24
ATN1-204ENST00000541029 CDK12Q9NYV4 1490 aaPredicted RBP29.06■■■□□ 2.24
ATN1-204ENST00000541029 EIF3AQ14152 1382 aaKnown RBP29.06■■■□□ 2.24
ATN1-204ENST00000541029 SPATA31A3Q5VYP0 1347 aa29.06■■■□□ 2.24
ATN1-204ENST00000541029 KRT28Q7Z3Y7 464 aa29.06■■■□□ 2.24
ATN1-204ENST00000541029 NGLY1Q96IV0 654 aa29.06■■■□□ 2.24
ATN1-204ENST00000541029 RXRBP28702 533 aa29.05■■■□□ 2.24
ATN1-204ENST00000541029 PRR36Q9H6K5 1346 aa29.04■■■□□ 2.24
ATN1-204ENST00000541029 TOPAZ1Q8N9V7 1692 aa29.02■■■□□ 2.24
ATN1-204ENST00000541029 PMFBP1Q8TBY8 1022 aa29.02■■■□□ 2.24
ATN1-204ENST00000541029 ATP7BP35670 1465 aa29.02■■■□□ 2.24
ATN1-204ENST00000541029 ALS2Q96Q42 1657 aa29.02■■■□□ 2.24
ATN1-204ENST00000541029 TRPM1Q7Z4N2 1603 aa29.02■■■□□ 2.24
ATN1-204ENST00000541029 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.01■■■□□ 2.23
ATN1-204ENST00000541029 WASLO00401 505 aaPredicted RBP29.01■■■□□ 2.23
ATN1-204ENST00000541029 RGS12O14924 1447 aa29.01■■■□□ 2.23
ATN1-204ENST00000541029 QRICH2Q9H0J4 1663 aa29■■■□□ 2.23
ATN1-204ENST00000541029 SIN3AQ96ST3 1273 aa29■■■□□ 2.23
ATN1-204ENST00000541029 SBNO1A3KN83 1393 aa29■■■□□ 2.23
ATN1-204ENST00000541029 NBPF1Q3BBV0 1214 aa28.99■■■□□ 2.23
ATN1-204ENST00000541029 QTRT2Q9H974 415 aaKnown RBP28.99■■■□□ 2.23
ATN1-204ENST00000541029 USP21Q9UK80 565 aa28.98■■■□□ 2.23
ATN1-204ENST00000541029 PLCH1Q4KWH8 1693 aa28.97■■■□□ 2.23
ATN1-204ENST00000541029 PSME1Q06323 249 aa28.97■■■□□ 2.23
ATN1-204ENST00000541029 L3MBTL2Q969R5 705 aa28.97■■■□□ 2.23
ATN1-204ENST00000541029 FNBP4Q8N3X1 1017 aaPredicted RBP28.96■■■□□ 2.23
ATN1-204ENST00000541029 ATRNO75882 1429 aa28.95■■■□□ 2.23
ATN1-204ENST00000541029 RBM6P78332 1123 aaKnown RBP28.95■■■□□ 2.22
ATN1-204ENST00000541029 CRYBG1Q9Y4K1 1723 aa28.94■■■□□ 2.22
ATN1-204ENST00000541029 BCL9LQ86UU0 1499 aa28.94■■■□□ 2.22
ATN1-204ENST00000541029 ARHGEF10O15013 1369 aa28.94■■■□□ 2.22
ATN1-204ENST00000541029 NEUROD1Q13562 356 aa28.92■■■□□ 2.22
ATN1-204ENST00000541029 PLEKHG5O94827 1062 aa28.91■■■□□ 2.22
ATN1-204ENST00000541029 LMOD2Q6P5Q4 547 aa28.91■■■□□ 2.22
ATN1-204ENST00000541029 TRPC5Q9UL62 973 aaPredicted RBP28.91■■■□□ 2.22
ATN1-204ENST00000541029 NWD2Q9ULI1 1742 aa28.91■■■□□ 2.22
ATN1-204ENST00000541029 GPRASP1Q5JY77 1395 aa28.9■■■□□ 2.22
ATN1-204ENST00000541029 SLIT2O94813 1529 aa28.9■■■□□ 2.22
ATN1-204ENST00000541029 CABLES1Q8TDN4 633 aa28.9■■■□□ 2.22
ATN1-204ENST00000541029 NUDT16Q96DE0 195 aaKnown RBP28.88■■■□□ 2.21
ATN1-204ENST00000541029 HAP1P54257 671 aaPredicted RBP28.87■■■□□ 2.21
ATN1-204ENST00000541029 CDK19Q9BWU1 502 aa28.87■■■□□ 2.21
ATN1-204ENST00000541029 NGDNQ8NEJ9 315 aaKnown RBP28.86■■■□□ 2.21
ATN1-204ENST00000541029 CENPJQ9HC77 1338 aaPredicted RBP28.86■■■□□ 2.21
ATN1-204ENST00000541029 GLI3P10071 1580 aa28.84■■■□□ 2.21
ATN1-204ENST00000541029 NRAPQ86VF7 1730 aa28.84■■■□□ 2.21
ATN1-204ENST00000541029 PHRF1Q9P1Y6 1649 aaKnown RBP28.83■■■□□ 2.21
ATN1-204ENST00000541029 UPF1Q92900 1129 aaKnown RBP eCLIP28.82■■■□□ 2.2
ATN1-204ENST00000541029 COL14A1Q05707 1796 aaKnown RBP28.8■■■□□ 2.2
ATN1-204ENST00000541029 POLR3AO14802 1390 aaPredicted RBP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms