RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 ANKK1Q8NFD2 765 aa6.94□□□□□ -1.3
AC090023.2-201ENST00000540875 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.94□□□□□ -1.3
AC090023.2-201ENST00000540875 DDX11L8A8MPP1 907 aa6.93□□□□□ -1.3
AC090023.2-201ENST00000540875 MS4A1P11836 297 aa6.93□□□□□ -1.3
AC090023.2-201ENST00000540875 NCLP19338 710 aaKnown RBP6.93□□□□□ -1.3
AC090023.2-201ENST00000540875 BCAMP50895 628 aa6.93□□□□□ -1.3
AC090023.2-201ENST00000540875 KCTD12Q96CX2 325 aaKnown RBP6.93□□□□□ -1.3
AC090023.2-201ENST00000540875 LRCH3Q96II8 777 aa6.93□□□□□ -1.3
AC090023.2-201ENST00000540875 PPM1GO15355 546 aaPredicted RBP6.92□□□□□ -1.3
AC090023.2-201ENST00000540875 CD46P15529 392 aa6.92□□□□□ -1.3
AC090023.2-201ENST00000540875 CALD1Q05682 793 aaKnown RBP6.92□□□□□ -1.3
AC090023.2-201ENST00000540875 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
AC090023.2-201ENST00000540875 FAM117AQ9C073 453 aa6.92□□□□□ -1.3
AC090023.2-201ENST00000540875 NCAPD3P42695 1498 aa6.92□□□□□ -1.3
AC090023.2-201ENST00000540875 BRD2P25440 801 aaKnown RBP6.91□□□□□ -1.3
AC090023.2-201ENST00000540875 ANP32AP39687 249 aaKnown RBP6.91□□□□□ -1.3
AC090023.2-201ENST00000540875 THSD4Q6ZMP0 1018 aa6.91□□□□□ -1.3
AC090023.2-201ENST00000540875 SULF1Q8IWU6 871 aa6.91□□□□□ -1.3
AC090023.2-201ENST00000540875 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.3
AC090023.2-201ENST00000540875 RDH13Q8NBN7 331 aa6.9□□□□□ -1.3
AC090023.2-201ENST00000540875 IPO9Q96P70 1041 aaKnown RBP6.9□□□□□ -1.3
AC090023.2-201ENST00000540875 HPS5Q9UPZ3 1129 aa6.9□□□□□ -1.3
AC090023.2-201ENST00000540875 RNF40O75150 1001 aa6.89□□□□□ -1.31
AC090023.2-201ENST00000540875 SLC4A3P48751 1232 aa6.89□□□□□ -1.31
AC090023.2-201ENST00000540875 PPP4CP60510 307 aa6.89□□□□□ -1.31
AC090023.2-201ENST00000540875 CYB5RLQ6IPT4 315 aa6.89□□□□□ -1.31
AC090023.2-201ENST00000540875 BEGAINQ9BUH8 593 aa6.89□□□□□ -1.31
AC090023.2-201ENST00000540875 TSR3Q9UJK0 312 aaKnown RBP6.89□□□□□ -1.31
AC090023.2-201ENST00000540875 KIF21AQ7Z4S6 1674 aa6.88□□□□□ -1.31
AC090023.2-201ENST00000540875 ARHGEF11O15085 1522 aa6.88□□□□□ -1.31
AC090023.2-201ENST00000540875 PLEKHG3A1L390 1219 aa6.88□□□□□ -1.31
AC090023.2-201ENST00000540875 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
AC090023.2-201ENST00000540875 GCGRP47871 477 aa6.88□□□□□ -1.31
AC090023.2-201ENST00000540875 WBP1LQ9NX94 342 aa6.88□□□□□ -1.31
AC090023.2-201ENST00000540875 PTPN5P54829 565 aa6.87□□□□□ -1.31
AC090023.2-201ENST00000540875 NEFMP07197 916 aa6.86□□□□□ -1.31
AC090023.2-201ENST00000540875 RNF166Q96A37 237 aaPredicted RBP6.86□□□□□ -1.31
AC090023.2-201ENST00000540875 PPP4R2Q9NY27 417 aa6.86□□□□□ -1.31
AC090023.2-201ENST00000540875 HSP90AA1P07900 732 aaKnown RBP6.85□□□□□ -1.31
AC090023.2-201ENST00000540875 CFHP08603 1231 aa6.85□□□□□ -1.31
AC090023.2-201ENST00000540875 APLP1P51693 650 aa6.85□□□□□ -1.31
AC090023.2-201ENST00000540875 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
AC090023.2-201ENST00000540875 NECTIN2Q92692 538 aa6.85□□□□□ -1.31
AC090023.2-201ENST00000540875 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
AC090023.2-201ENST00000540875 LAMC3Q9Y6N6 1575 aa6.85□□□□□ -1.31
AC090023.2-201ENST00000540875 PDS5BQ9NTI5 1447 aa6.84□□□□□ -1.31
AC090023.2-201ENST00000540875 NUTM1Q86Y26 1132 aa6.84□□□□□ -1.31
AC090023.2-201ENST00000540875 IPO4Q8TEX9 1081 aaKnown RBP6.84□□□□□ -1.31
AC090023.2-201ENST00000540875 ARID4BQ4LE39 1312 aaPredicted RBP6.83□□□□□ -1.32
AC090023.2-201ENST00000540875 A0A0U1RQG5 324 aaPredicted RBP6.83□□□□□ -1.32
AC090023.2-201ENST00000540875 ACTN4O43707 911 aaKnown RBP6.83□□□□□ -1.32
AC090023.2-201ENST00000540875 KDM4AO75164 1064 aa6.83□□□□□ -1.32
AC090023.2-201ENST00000540875 KMT5BQ4FZB7 885 aa6.83□□□□□ -1.32
AC090023.2-201ENST00000540875 NAP1L5Q96NT1 182 aaPredicted RBP6.83□□□□□ -1.32
AC090023.2-201ENST00000540875 TBC1D2Q9BYX2 928 aa6.83□□□□□ -1.32
AC090023.2-201ENST00000540875 ATAD2BQ9ULI0 1458 aa6.83□□□□□ -1.32
AC090023.2-201ENST00000540875 MRC2Q9UBG0 1479 aa6.82□□□□□ -1.32
AC090023.2-201ENST00000540875 FUT2Q10981 343 aa6.82□□□□□ -1.32
AC090023.2-201ENST00000540875 PDCL3Q9H2J4 239 aa6.82□□□□□ -1.32
AC090023.2-201ENST00000540875 BCCIPQ9P287 314 aaKnown RBP eCLIP6.82□□□□□ -1.32
AC090023.2-201ENST00000540875 HCSTQ9UBK5 93 aa6.82□□□□□ -1.32
AC090023.2-201ENST00000540875 MOXD2PA6NHM9 499 aa6.81□□□□□ -1.32
AC090023.2-201ENST00000540875 DIXDC1Q155Q3 683 aa6.81□□□□□ -1.32
AC090023.2-201ENST00000540875 NYAP1Q6ZVC0 841 aa6.81□□□□□ -1.32
AC090023.2-201ENST00000540875 MAP7D2Q96T17 732 aa6.81□□□□□ -1.32
AC090023.2-201ENST00000540875 PRR14Q9BWN1 585 aa6.81□□□□□ -1.32
AC090023.2-201ENST00000540875 WDR62O43379 1518 aa6.81□□□□□ -1.32
AC090023.2-201ENST00000540875 HMGXB3Q12766 1538 aa6.81□□□□□ -1.32
AC090023.2-201ENST00000540875 NDUFV2P19404 249 aa6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 ATP6V1AP38606 617 aa6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 USP46P62068 366 aa6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 CNGB1Q14028 1251 aaPredicted RBP6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 TMEM132AQ24JP5 1023 aa6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 PUS10Q3MIT2 529 aaKnown RBP6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 MYSM1Q5VVJ2 828 aa6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 HLA-CQ95604 372 aa6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 POLR3EQ9NVU0 708 aa6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 TIMELESSQ9UNS1 1208 aa6.8□□□□□ -1.32
AC090023.2-201ENST00000540875 HOXA2O43364 376 aa6.79□□□□□ -1.32
AC090023.2-201ENST00000540875 TPM2P07951 284 aa6.79□□□□□ -1.32
AC090023.2-201ENST00000540875 SKIV2LQ15477 1246 aaKnown RBP6.79□□□□□ -1.32
AC090023.2-201ENST00000540875 RIC3Q7Z5B4 369 aa6.79□□□□□ -1.32
AC090023.2-201ENST00000540875 PRDM4Q9UKN5 801 aa6.79□□□□□ -1.32
AC090023.2-201ENST00000540875 SPTLC1O15269 473 aa6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 GRIPAP1Q4V328 841 aa6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 SH3D19Q5HYK7 790 aa6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 MORN1Q5T089 497 aa6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 PROCA1Q8NCQ7 364 aaPredicted RBP6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 GOPCQ9HD26 462 aa6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 LIMD1Q9UGP4 676 aa6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 NAP1L2Q9ULW6 460 aaPredicted RBP6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 PCDHB3Q9Y5E6 796 aa6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 ARAP1Q96P48 1450 aa6.78□□□□□ -1.32
AC090023.2-201ENST00000540875 CANXP27824 592 aaKnown RBP6.77□□□□□ -1.33
AC090023.2-201ENST00000540875 GUCA2AQ02747 115 aa6.77□□□□□ -1.33
AC090023.2-201ENST00000540875 TJAP1Q5JTD0 557 aa6.77□□□□□ -1.33
AC090023.2-201ENST00000540875 RSBN1LQ6PCB5 846 aaPredicted RBP6.77□□□□□ -1.33
AC090023.2-201ENST00000540875 BLOC1S3Q6QNY0 202 aa6.77□□□□□ -1.33
AC090023.2-201ENST00000540875 SCUBE3Q8IX30 993 aa6.77□□□□□ -1.33
AC090023.2-201ENST00000540875 ANP32BQ92688 251 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms