RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 WAPLQ7Z5K2 1190 aa24.23■■□□□ 1.47
TRIM65-203ENST00000540812 ANKRD30BQ9BXX2 1392 aa24.23■■□□□ 1.47
TRIM65-203ENST00000540812 IFT172Q9UG01 1749 aa24.22■■□□□ 1.47
TRIM65-203ENST00000540812 CDC42BPGQ6DT37 1551 aa24.22■■□□□ 1.47
TRIM65-203ENST00000540812 LRPPRCP42704 1394 aaKnown RBP24.22■■□□□ 1.47
TRIM65-203ENST00000540812 TMEM132EQ6IEE7 984 aa24.22■■□□□ 1.47
TRIM65-203ENST00000540812 TECPR2O15040 1411 aa24.21■■□□□ 1.47
TRIM65-203ENST00000540812 ESCO1Q5FWF5 840 aa24.21■■□□□ 1.47
TRIM65-203ENST00000540812 QTRT2Q9H974 415 aaKnown RBP24.21■■□□□ 1.47
TRIM65-203ENST00000540812 PIK3C2GO75747 1445 aa24.2■■□□□ 1.46
TRIM65-203ENST00000540812 PLEKHH1Q9ULM0 1364 aa24.2■■□□□ 1.46
TRIM65-203ENST00000540812 NGLY1Q96IV0 654 aa24.2■■□□□ 1.46
TRIM65-203ENST00000540812 RGS12O14924 1447 aa24.18■■□□□ 1.46
TRIM65-203ENST00000540812 ABCC11Q96J66 1382 aa24.18■■□□□ 1.46
TRIM65-203ENST00000540812 RBM6P78332 1123 aaKnown RBP24.18■■□□□ 1.46
TRIM65-203ENST00000540812 NUTM2FA1L443 756 aa24.17■■□□□ 1.46
TRIM65-203ENST00000540812 NPHP3Q7Z494 1330 aa24.16■■□□□ 1.46
TRIM65-203ENST00000540812 PXDNQ92626 1479 aa24.15■■□□□ 1.46
TRIM65-203ENST00000540812 XPCQ01831 940 aaPredicted RBP24.15■■□□□ 1.46
TRIM65-203ENST00000540812 FOXO3O43524 673 aa24.14■■□□□ 1.45
TRIM65-203ENST00000540812 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.45
TRIM65-203ENST00000540812 YTHDC2Q9H6S0 1430 aaKnown RBP24.14■■□□□ 1.45
TRIM65-203ENST00000540812 COL22A1Q8NFW1 1626 aaPredicted RBP24.13■■□□□ 1.45
TRIM65-203ENST00000540812 MYOM2P54296 1465 aa24.13■■□□□ 1.45
TRIM65-203ENST00000540812 USP21Q9UK80 565 aa24.12■■□□□ 1.45
TRIM65-203ENST00000540812 FNBP4Q8N3X1 1017 aaPredicted RBP24.11■■□□□ 1.45
TRIM65-203ENST00000540812 C14orf93Q9H972 538 aaKnown RBP24.1■■□□□ 1.45
TRIM65-203ENST00000540812 CFAP70Q5T0N1 1121 aa24.09■■□□□ 1.45
TRIM65-203ENST00000540812 NRXN1Q9ULB1 1477 aa24.08■■□□□ 1.45
TRIM65-203ENST00000540812 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
TRIM65-203ENST00000540812 RAB3GAP2Q9H2M9 1393 aa24.07■■□□□ 1.44
TRIM65-203ENST00000540812 TRPC5Q9UL62 973 aaPredicted RBP24.07■■□□□ 1.44
TRIM65-203ENST00000540812 ACIN1Q9UKV3 1341 aaKnown RBP24.07■■□□□ 1.44
TRIM65-203ENST00000540812 SIRT1Q96EB6 747 aa24.06■■□□□ 1.44
TRIM65-203ENST00000540812 ATRNO75882 1429 aa24.06■■□□□ 1.44
TRIM65-203ENST00000540812 BCL9LQ86UU0 1499 aa24.03■■□□□ 1.44
TRIM65-203ENST00000540812 DHX57Q6P158 1386 aaKnown RBP24.03■■□□□ 1.44
TRIM65-203ENST00000540812 SAFB2Q14151 953 aaKnown RBP eCLIP24.01■■□□□ 1.43
TRIM65-203ENST00000540812 SPATA31A3Q5VYP0 1347 aa24.01■■□□□ 1.43
TRIM65-203ENST00000540812 KIF1AQ12756 1690 aa24■■□□□ 1.43
TRIM65-203ENST00000540812 PRAM1Q96QH2 718 aa24■■□□□ 1.43
TRIM65-203ENST00000540812 KRT28Q7Z3Y7 464 aa23.99■■□□□ 1.43
TRIM65-203ENST00000540812 MARF1Q9Y4F3 1742 aaKnown RBP23.98■■□□□ 1.43
TRIM65-203ENST00000540812 PHF8Q9UPP1 1060 aa23.98■■□□□ 1.43
TRIM65-203ENST00000540812 RGPD8O14715 1765 aaPredicted RBP23.97■■□□□ 1.43
TRIM65-203ENST00000540812 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
TRIM65-203ENST00000540812 EP400Q96L91 3159 aa23.96■■□□□ 1.43
TRIM65-203ENST00000540812 DLC1Q96QB1 1528 aa23.94■■□□□ 1.42
TRIM65-203ENST00000540812 POGKQ9P215 609 aa23.94■■□□□ 1.42
TRIM65-203ENST00000540812 ADGRB1O14514 1584 aa23.94■■□□□ 1.42
TRIM65-203ENST00000540812 TNS3Q68CZ2 1445 aa23.93■■□□□ 1.42
TRIM65-203ENST00000540812 GJD4Q96KN9 370 aaPredicted RBP23.93■■□□□ 1.42
TRIM65-203ENST00000540812 UNC5CLQ8IV45 518 aa23.92■■□□□ 1.42
TRIM65-203ENST00000540812 SLIT2O94813 1529 aa23.92■■□□□ 1.42
TRIM65-203ENST00000540812 CABLES1Q8TDN4 633 aa23.91■■□□□ 1.42
TRIM65-203ENST00000540812 TRAK1Q9UPV9 953 aa23.91■■□□□ 1.42
TRIM65-203ENST00000540812 KDM2AQ9Y2K7 1162 aa23.91■■□□□ 1.42
TRIM65-203ENST00000540812 USP32Q8NFA0 1604 aa23.91■■□□□ 1.42
TRIM65-203ENST00000540812 PLEKHG5O94827 1062 aa23.9■■□□□ 1.42
TRIM65-203ENST00000540812 PSME1Q06323 249 aa23.9■■□□□ 1.42
TRIM65-203ENST00000540812 SRCAPQ6ZRS2 3230 aa23.9■■□□□ 1.42
TRIM65-203ENST00000540812 PMFBP1Q8TBY8 1022 aa23.89■■□□□ 1.41
TRIM65-203ENST00000540812 HIRIP3Q9BW71 556 aaPredicted RBP23.89■■□□□ 1.41
TRIM65-203ENST00000540812 SBNO1A3KN83 1393 aa23.89■■□□□ 1.41
TRIM65-203ENST00000540812 RALGAPBQ86X10 1494 aa23.88■■□□□ 1.41
TRIM65-203ENST00000540812 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.88■■□□□ 1.41
TRIM65-203ENST00000540812 ANKARQ7Z5J8 1434 aa23.88■■□□□ 1.41
TRIM65-203ENST00000540812 DCAF11Q8TEB1 546 aa23.88■■□□□ 1.41
TRIM65-203ENST00000540812 ADGRB2O60241 1585 aa23.87■■□□□ 1.41
TRIM65-203ENST00000540812 LMOD2Q6P5Q4 547 aa23.87■■□□□ 1.41
TRIM65-203ENST00000540812 GLI3P10071 1580 aa23.86■■□□□ 1.41
TRIM65-203ENST00000540812 HAP1P54257 671 aaPredicted RBP23.86■■□□□ 1.41
TRIM65-203ENST00000540812 MINK1Q8N4C8 1332 aaPredicted RBP23.85■■□□□ 1.41
TRIM65-203ENST00000540812 PRR36Q9H6K5 1346 aa23.84■■□□□ 1.41
TRIM65-203ENST00000540812 ARHGEF10O15013 1369 aa23.83■■□□□ 1.41
TRIM65-203ENST00000540812 ABCA3Q99758 1704 aa23.81■■□□□ 1.4
TRIM65-203ENST00000540812 HRCP23327 699 aa23.81■■□□□ 1.4
TRIM65-203ENST00000540812 WASLO00401 505 aaPredicted RBP23.79■■□□□ 1.4
TRIM65-203ENST00000540812 VPS72Q15906 364 aa23.79■■□□□ 1.4
TRIM65-203ENST00000540812 TULP4Q9NRJ4 1543 aa23.79■■□□□ 1.4
TRIM65-203ENST00000540812 TRPM3Q9HCF6 1732 aaPredicted RBP23.79■■□□□ 1.4
TRIM65-203ENST00000540812 FAM83GA6ND36 823 aa23.78■■□□□ 1.4
TRIM65-203ENST00000540812 STAC3Q96MF2 364 aa23.78■■□□□ 1.4
TRIM65-203ENST00000540812 PLCH1Q4KWH8 1693 aa23.78■■□□□ 1.4
TRIM65-203ENST00000540812 EIF3AQ14152 1382 aaKnown RBP23.77■■□□□ 1.4
TRIM65-203ENST00000540812 CCDC125Q86Z20 511 aa23.76■■□□□ 1.39
TRIM65-203ENST00000540812 SEPT12Q8IYM1 358 aa23.76■■□□□ 1.39
TRIM65-203ENST00000540812 CCDC9Q9Y3X0 531 aaKnown RBP23.75■■□□□ 1.39
TRIM65-203ENST00000540812 NWD2Q9ULI1 1742 aa23.75■■□□□ 1.39
TRIM65-203ENST00000540812 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
TRIM65-203ENST00000540812 BRWD3Q6RI45 1802 aa23.74■■□□□ 1.39
TRIM65-203ENST00000540812 ALS2Q96Q42 1657 aa23.73■■□□□ 1.39
TRIM65-203ENST00000540812 ARHGEF28Q8N1W1 1705 aaKnown RBP23.73■■□□□ 1.39
TRIM65-203ENST00000540812 NGDNQ8NEJ9 315 aaKnown RBP23.72■■□□□ 1.39
TRIM65-203ENST00000540812 ONECUT3O60422 494 aaPredicted RBP23.71■■□□□ 1.39
TRIM65-203ENST00000540812 BLMP54132 1417 aaPredicted RBP23.7■■□□□ 1.38
TRIM65-203ENST00000540812 ZRANB1Q9UGI0 708 aa23.7■■□□□ 1.38
TRIM65-203ENST00000540812 NRAPQ86VF7 1730 aa23.7■■□□□ 1.38
TRIM65-203ENST00000540812 ATP7BP35670 1465 aa23.69■■□□□ 1.38
TRIM65-203ENST00000540812 NUDT16Q96DE0 195 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms