RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 RUNDC1Q96C34 613 aa22.12■■□□□ 1.13
EPB41L3-204ENST00000540638 CDK19Q9BWU1 502 aa22.12■■□□□ 1.13
EPB41L3-204ENST00000540638 TXNDC2Q86VQ3 553 aa22.11■■□□□ 1.13
EPB41L3-204ENST00000540638 TSR2Q969E8 191 aaKnown RBP22.11■■□□□ 1.13
EPB41L3-204ENST00000540638 KIDINS220Q9ULH0 1771 aa22.11■■□□□ 1.13
EPB41L3-204ENST00000540638 RTL5Q5HYW3 569 aaPredicted RBP22.11■■□□□ 1.13
EPB41L3-204ENST00000540638 CEP152O94986 1710 aa22.1■■□□□ 1.13
EPB41L3-204ENST00000540638 EFCAB6Q5THR3 1501 aa22.1■■□□□ 1.13
EPB41L3-204ENST00000540638 SLC4A3P48751 1232 aa22.09■■□□□ 1.13
EPB41L3-204ENST00000540638 BLMP54132 1417 aaPredicted RBP22.09■■□□□ 1.13
EPB41L3-204ENST00000540638 IPO9Q96P70 1041 aaKnown RBP22.08■■□□□ 1.13
EPB41L3-204ENST00000540638 PPRC1Q5VV67 1664 aaKnown RBP22.08■■□□□ 1.12
EPB41L3-204ENST00000540638 HMOX1P09601 288 aa22.07■■□□□ 1.12
EPB41L3-204ENST00000540638 RNF17Q9BXT8 1623 aaKnown RBP22.07■■□□□ 1.12
EPB41L3-204ENST00000540638 FTSJ3Q8IY81 847 aaKnown RBP22.07■■□□□ 1.12
EPB41L3-204ENST00000540638 TNNQ9UQP3 1299 aa22.06■■□□□ 1.12
EPB41L3-204ENST00000540638 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
EPB41L3-204ENST00000540638 KIF1BO60333 1816 aa22.05■■□□□ 1.12
EPB41L3-204ENST00000540638 ABCA6Q8N139 1617 aa22.04■■□□□ 1.12
EPB41L3-204ENST00000540638 MLH3Q9UHC1 1453 aa22.04■■□□□ 1.12
EPB41L3-204ENST00000540638 NCKAP5LQ9HCH0 1330 aa22.04■■□□□ 1.12
EPB41L3-204ENST00000540638 MAP3K4Q9Y6R4 1608 aa22.04■■□□□ 1.12
EPB41L3-204ENST00000540638 PIK3C2GO75747 1445 aa22.02■■□□□ 1.12
EPB41L3-204ENST00000540638 CEBPAP49715 358 aaPredicted RBP22.01■■□□□ 1.11
EPB41L3-204ENST00000540638 SMC4Q9NTJ3 1288 aa22.01■■□□□ 1.11
EPB41L3-204ENST00000540638 HECW2Q9P2P5 1572 aa22■■□□□ 1.11
EPB41L3-204ENST00000540638 ZMYM4Q5VZL5 1548 aa22■■□□□ 1.11
EPB41L3-204ENST00000540638 RIPK4P57078 832 aa22■■□□□ 1.11
EPB41L3-204ENST00000540638 MROH1Q8NDA8 1641 aa22■■□□□ 1.11
EPB41L3-204ENST00000540638 CENPQQ7L2Z9 268 aaPredicted RBP22■■□□□ 1.11
EPB41L3-204ENST00000540638 MYOM2P54296 1465 aa22■■□□□ 1.11
EPB41L3-204ENST00000540638 KDM5AP29375 1690 aaKnown RBP22■■□□□ 1.11
EPB41L3-204ENST00000540638 TRHP20396 242 aaPredicted RBP21.99■■□□□ 1.11
EPB41L3-204ENST00000540638 ABCC3O15438 1527 aa21.99■■□□□ 1.11
EPB41L3-204ENST00000540638 FYB1O15117 783 aa21.99■■□□□ 1.11
EPB41L3-204ENST00000540638 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
EPB41L3-204ENST00000540638 BACH2Q9BYV9 841 aa21.98■■□□□ 1.11
EPB41L3-204ENST00000540638 SYNMO15061 1565 aa21.98■■□□□ 1.11
EPB41L3-204ENST00000540638 TSPOAP1O95153 1857 aa21.98■■□□□ 1.11
EPB41L3-204ENST00000540638 MYH16Q9H6N6 1097 aa21.98■■□□□ 1.11
EPB41L3-204ENST00000540638 ZRANB1Q9UGI0 708 aa21.98■■□□□ 1.11
EPB41L3-204ENST00000540638 A0A1W2PP64 1363 aa21.97■■□□□ 1.11
EPB41L3-204ENST00000540638 LAMC1P11047 1609 aa21.97■■□□□ 1.11
EPB41L3-204ENST00000540638 SLC26A8Q96RN1 970 aa21.97■■□□□ 1.11
EPB41L3-204ENST00000540638 THUMPD2Q9BTF0 503 aaKnown RBP21.97■■□□□ 1.11
EPB41L3-204ENST00000540638 IQGAP1P46940 1657 aa21.96■■□□□ 1.11
EPB41L3-204ENST00000540638 EXOSC9Q06265 439 aaKnown RBP21.96■■□□□ 1.11
EPB41L3-204ENST00000540638 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
EPB41L3-204ENST00000540638 DEPDC5O75140 1603 aa21.96■■□□□ 1.11
EPB41L3-204ENST00000540638 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
EPB41L3-204ENST00000540638 RRS1Q15050 365 aaKnown RBP21.95■■□□□ 1.1
EPB41L3-204ENST00000540638 ITPRIPQ8IWB1 547 aa21.95■■□□□ 1.1
EPB41L3-204ENST00000540638 NKTRP30414 1462 aaKnown RBP21.94■■□□□ 1.1
EPB41L3-204ENST00000540638 VWDEQ8N2E2 1590 aa21.94■■□□□ 1.1
EPB41L3-204ENST00000540638 NEO1Q92859 1461 aa21.94■■□□□ 1.1
EPB41L3-204ENST00000540638 NPC1L1Q9UHC9 1359 aa21.94■■□□□ 1.1
EPB41L3-204ENST00000540638 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
EPB41L3-204ENST00000540638 FRMPD1Q5SYB0 1578 aa21.93■■□□□ 1.1
EPB41L3-204ENST00000540638 IGHDP01880 384 aa21.93■■□□□ 1.1
EPB41L3-204ENST00000540638 NME9Q86XW9 330 aa21.93■■□□□ 1.1
EPB41L3-204ENST00000540638 ANKRD36BQ8N2N9 1353 aa21.93■■□□□ 1.1
EPB41L3-204ENST00000540638 PRKAR2BP31323 418 aa21.93■■□□□ 1.1
EPB41L3-204ENST00000540638 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
EPB41L3-204ENST00000540638 POLR3AO14802 1390 aaPredicted RBP21.92■■□□□ 1.1
EPB41L3-204ENST00000540638 RARSP54136 660 aaKnown RBP21.91■■□□□ 1.1
EPB41L3-204ENST00000540638 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
EPB41L3-204ENST00000540638 TMPOP42166 694 aaKnown RBP21.9■■□□□ 1.1
EPB41L3-204ENST00000540638 ADGRB3O60242 1522 aa21.9■■□□□ 1.1
EPB41L3-204ENST00000540638 RLBP1P12271 317 aa21.9■■□□□ 1.1
EPB41L3-204ENST00000540638 MS4A1P11836 297 aa21.89■■□□□ 1.09
EPB41L3-204ENST00000540638 SBNO2Q9Y2G9 1366 aa21.88■■□□□ 1.09
EPB41L3-204ENST00000540638 YTHDC2Q9H6S0 1430 aaKnown RBP21.87■■□□□ 1.09
EPB41L3-204ENST00000540638 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
EPB41L3-204ENST00000540638 PMFBP1Q8TBY8 1022 aa21.86■■□□□ 1.09
EPB41L3-204ENST00000540638 FAM161AQ3B820 660 aa21.85■■□□□ 1.09
EPB41L3-204ENST00000540638 COG3Q96JB2 828 aa21.85■■□□□ 1.09
EPB41L3-204ENST00000540638 ZKSCAN2Q63HK3 967 aa21.84■■□□□ 1.09
EPB41L3-204ENST00000540638 NUDT16Q96DE0 195 aaKnown RBP21.84■■□□□ 1.09
EPB41L3-204ENST00000540638 HDGFP51858 240 aaKnown RBP21.84■■□□□ 1.09
EPB41L3-204ENST00000540638 WDR63Q8IWG1 891 aa21.84■■□□□ 1.09
EPB41L3-204ENST00000540638 NUTM2GQ5VZR2 741 aa21.83■■□□□ 1.09
EPB41L3-204ENST00000540638 CFAP74Q9C0B2 1584 aa21.83■■□□□ 1.08
EPB41L3-204ENST00000540638 DIP2CQ9Y2E4 1556 aa21.83■■□□□ 1.08
EPB41L3-204ENST00000540638 DEKP35659 375 aaKnown RBP21.82■■□□□ 1.08
EPB41L3-204ENST00000540638 DZIP1LQ8IYY4 767 aaKnown RBP21.82■■□□□ 1.08
EPB41L3-204ENST00000540638 NGEFQ8N5V2 710 aa21.82■■□□□ 1.08
EPB41L3-204ENST00000540638 LMTK2Q8IWU2 1503 aa21.82■■□□□ 1.08
EPB41L3-204ENST00000540638 DCTN1Q14203 1278 aa21.82■■□□□ 1.08
EPB41L3-204ENST00000540638 TRMT2AQ8IZ69 625 aaKnown RBP21.82■■□□□ 1.08
EPB41L3-204ENST00000540638 PDE3AQ14432 1141 aa21.82■■□□□ 1.08
EPB41L3-204ENST00000540638 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
EPB41L3-204ENST00000540638 SSH1Q8WYL5 1049 aa21.81■■□□□ 1.08
EPB41L3-204ENST00000540638 PCDHB15Q9Y5E8 787 aa21.81■■□□□ 1.08
EPB41L3-204ENST00000540638 RIMS2Q9UQ26 1411 aa21.8■■□□□ 1.08
EPB41L3-204ENST00000540638 SPRYD3Q8NCJ5 442 aa21.8■■□□□ 1.08
EPB41L3-204ENST00000540638 WASLO00401 505 aaPredicted RBP21.8■■□□□ 1.08
EPB41L3-204ENST00000540638 NOB1Q9ULX3 412 aaKnown RBP21.8■■□□□ 1.08
EPB41L3-204ENST00000540638 GLI2P10070 1586 aa21.79■■□□□ 1.08
EPB41L3-204ENST00000540638 PHACTR3Q96KR7 559 aa21.78■■□□□ 1.08
EPB41L3-204ENST00000540638 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms