RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 PXYLP1Q8TE99 480 aa7.1□□□□□ -1.27
AC055720.1-201ENST00000539552 IRF7Q92985 503 aa7.1□□□□□ -1.27
AC055720.1-201ENST00000539552 DDX11L8A8MPP1 907 aa7.09□□□□□ -1.27
AC055720.1-201ENST00000539552 SMPD1P17405 629 aa7.09□□□□□ -1.27
AC055720.1-201ENST00000539552 FECHP22830 423 aa7.09□□□□□ -1.27
AC055720.1-201ENST00000539552 FUT2Q10981 343 aa7.09□□□□□ -1.27
AC055720.1-201ENST00000539552 TPRNQ4KMQ1 711 aa7.09□□□□□ -1.27
AC055720.1-201ENST00000539552 SULF1Q8IWU6 871 aa7.09□□□□□ -1.27
AC055720.1-201ENST00000539552 TRIM32Q13049 653 aa7.08□□□□□ -1.28
AC055720.1-201ENST00000539552 MRGPRX2Q96LB1 330 aa7.08□□□□□ -1.28
AC055720.1-201ENST00000539552 TIMELESSQ9UNS1 1208 aa7.08□□□□□ -1.28
AC055720.1-201ENST00000539552 PRDM9Q9NQV7 894 aa7.07□□□□□ -1.28
AC055720.1-201ENST00000539552 NXF1Q9UBU9 619 aaKnown RBP7.07□□□□□ -1.28
AC055720.1-201ENST00000539552 SLC27A5Q9Y2P5 690 aa7.07□□□□□ -1.28
AC055720.1-201ENST00000539552 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
AC055720.1-201ENST00000539552 J3QL48 77 aa7.06□□□□□ -1.28
AC055720.1-201ENST00000539552 Q3C1V9 767 aa7.06□□□□□ -1.28
AC055720.1-201ENST00000539552 MSS51Q4VC12 460 aa7.06□□□□□ -1.28
AC055720.1-201ENST00000539552 METTL3Q86U44 580 aaKnown RBP7.06□□□□□ -1.28
AC055720.1-201ENST00000539552 FAM160A2Q8N612 972 aaPredicted RBP7.06□□□□□ -1.28
AC055720.1-201ENST00000539552 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
AC055720.1-201ENST00000539552 HIC1Q14526 733 aa7.04□□□□□ -1.28
AC055720.1-201ENST00000539552 NPAS3Q8IXF0 933 aa7.04□□□□□ -1.28
AC055720.1-201ENST00000539552 CCDC24Q8N4L8 307 aa7.04□□□□□ -1.28
AC055720.1-201ENST00000539552 HPS1Q92902 700 aa7.04□□□□□ -1.28
AC055720.1-201ENST00000539552 GMPRP36959 345 aa7.03□□□□□ -1.28
AC055720.1-201ENST00000539552 BRICD5Q6PL45 260 aa7.03□□□□□ -1.28
AC055720.1-201ENST00000539552 ALDH1A1P00352 501 aa7.02□□□□□ -1.29
AC055720.1-201ENST00000539552 GCGRP47871 477 aa7.02□□□□□ -1.29
AC055720.1-201ENST00000539552 WASF2Q9Y6W5 498 aa7.01□□□□□ -1.29
AC055720.1-201ENST00000539552 TULP1O00294 542 aaPredicted RBP7□□□□□ -1.29
AC055720.1-201ENST00000539552 LCE2CQ5TA81 110 aa7□□□□□ -1.29
AC055720.1-201ENST00000539552 RC3H1Q5TC82 1133 aaKnown RBP7□□□□□ -1.29
AC055720.1-201ENST00000539552 ERICH6Q7L0X2 663 aa7□□□□□ -1.29
AC055720.1-201ENST00000539552 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
AC055720.1-201ENST00000539552 WNT7BP56706 349 aa6.99□□□□□ -1.29
AC055720.1-201ENST00000539552 RNF19BQ6ZMZ0 732 aa6.99□□□□□ -1.29
AC055720.1-201ENST00000539552 P3H3Q8IVL6 736 aa6.99□□□□□ -1.29
AC055720.1-201ENST00000539552 KRTAP4-6Q9BYQ5 205 aa6.99□□□□□ -1.29
AC055720.1-201ENST00000539552 CAPN5O15484 640 aaPredicted RBP6.98□□□□□ -1.29
AC055720.1-201ENST00000539552 SMYD5Q6GMV2 418 aa6.98□□□□□ -1.29
AC055720.1-201ENST00000539552 KCNV2Q8TDN2 545 aa6.98□□□□□ -1.29
AC055720.1-201ENST00000539552 VEGFBP49765 207 aa6.97□□□□□ -1.29
AC055720.1-201ENST00000539552 MMP16P51512 607 aa6.97□□□□□ -1.29
AC055720.1-201ENST00000539552 HOMEZQ8IX15 550 aa6.97□□□□□ -1.29
AC055720.1-201ENST00000539552 USB1Q9BQ65 265 aaKnown RBP6.97□□□□□ -1.29
AC055720.1-201ENST00000539552 GNPATO15228 680 aa6.96□□□□□ -1.3
AC055720.1-201ENST00000539552 EHBP1Q8NDI1 1231 aa6.96□□□□□ -1.3
AC055720.1-201ENST00000539552 H3BM21 787 aa6.95□□□□□ -1.3
AC055720.1-201ENST00000539552 BMP1P13497 986 aa6.95□□□□□ -1.3
AC055720.1-201ENST00000539552 SUZ12Q15022 739 aaKnown RBP6.95□□□□□ -1.3
AC055720.1-201ENST00000539552 DXOO77932 396 aaKnown RBP6.93□□□□□ -1.3
AC055720.1-201ENST00000539552 SCARF1Q14162 830 aa6.93□□□□□ -1.3
AC055720.1-201ENST00000539552 NLRP7Q8WX94 980 aa6.92□□□□□ -1.3
AC055720.1-201ENST00000539552 SEMA3EO15041 775 aa6.91□□□□□ -1.3
AC055720.1-201ENST00000539552 GTF3C3Q9Y5Q9 886 aa6.91□□□□□ -1.3
AC055720.1-201ENST00000539552 KDM4AO75164 1064 aa6.9□□□□□ -1.3
AC055720.1-201ENST00000539552 SKOR1P84550 965 aa6.9□□□□□ -1.3
AC055720.1-201ENST00000539552 TRIM46Q7Z4K8 759 aa6.9□□□□□ -1.3
AC055720.1-201ENST00000539552 ZFP42Q96MM3 310 aa6.9□□□□□ -1.3
AC055720.1-201ENST00000539552 PLEKHG3A1L390 1219 aa6.89□□□□□ -1.31
AC055720.1-201ENST00000539552 RNF225M0QZC1 329 aaPredicted RBP6.89□□□□□ -1.31
AC055720.1-201ENST00000539552 USP46P62068 366 aa6.89□□□□□ -1.31
AC055720.1-201ENST00000539552 KCTD17Q8N5Z5 321 aa6.89□□□□□ -1.31
AC055720.1-201ENST00000539552 ERBB4Q15303 1308 aa6.89□□□□□ -1.31
AC055720.1-201ENST00000539552 KDM2AQ9Y2K7 1162 aa6.88□□□□□ -1.31
AC055720.1-201ENST00000539552 JUNDP17535 347 aa6.87□□□□□ -1.31
AC055720.1-201ENST00000539552 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
AC055720.1-201ENST00000539552 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
AC055720.1-201ENST00000539552 RBM26Q5T8P6 1007 aaKnown RBP6.87□□□□□ -1.31
AC055720.1-201ENST00000539552 TMEM151AQ8N4L1 468 aa6.87□□□□□ -1.31
AC055720.1-201ENST00000539552 NUDT12Q9BQG2 462 aa6.87□□□□□ -1.31
AC055720.1-201ENST00000539552 CUX2O14529 1486 aa6.85□□□□□ -1.31
AC055720.1-201ENST00000539552 TSHZ2Q9NRE2 1034 aa6.85□□□□□ -1.31
AC055720.1-201ENST00000539552 SIAH2O43255 324 aa6.84□□□□□ -1.31
AC055720.1-201ENST00000539552 GDF11O95390 407 aa6.84□□□□□ -1.31
AC055720.1-201ENST00000539552 CD46P15529 392 aa6.84□□□□□ -1.31
AC055720.1-201ENST00000539552 RANGAP1P46060 587 aaPredicted RBP6.84□□□□□ -1.31
AC055720.1-201ENST00000539552 MRPL14Q6P1L8 145 aaKnown RBP6.84□□□□□ -1.31
AC055720.1-201ENST00000539552 PURBQ96QR8 312 aaKnown RBP6.84□□□□□ -1.31
AC055720.1-201ENST00000539552 MAN1A2O60476 641 aa6.83□□□□□ -1.32
AC055720.1-201ENST00000539552 UPP2O95045 317 aa6.82□□□□□ -1.32
AC055720.1-201ENST00000539552 NNTQ13423 1086 aa6.82□□□□□ -1.32
AC055720.1-201ENST00000539552 ADH1CP00326 375 aa6.81□□□□□ -1.32
AC055720.1-201ENST00000539552 VSIG8P0DPA2 414 aa6.81□□□□□ -1.32
AC055720.1-201ENST00000539552 WDR4P57081 412 aaKnown RBP6.81□□□□□ -1.32
AC055720.1-201ENST00000539552 GPIHBP1Q8IV16 184 aa6.81□□□□□ -1.32
AC055720.1-201ENST00000539552 PHOX2BQ99453 314 aa6.81□□□□□ -1.32
AC055720.1-201ENST00000539552 HOXA2O43364 376 aa6.8□□□□□ -1.32
AC055720.1-201ENST00000539552 CCNYL3P0C7X3 344 aa6.8□□□□□ -1.32
AC055720.1-201ENST00000539552 MS4A1P11836 297 aa6.8□□□□□ -1.32
AC055720.1-201ENST00000539552 SH3BP2P78314 561 aa6.8□□□□□ -1.32
AC055720.1-201ENST00000539552 RASSF7Q02833 373 aa6.8□□□□□ -1.32
AC055720.1-201ENST00000539552 RETREG3Q86VR2 466 aa6.8□□□□□ -1.32
AC055720.1-201ENST00000539552 NUTM1Q86Y26 1132 aa6.8□□□□□ -1.32
AC055720.1-201ENST00000539552 TLL2Q9Y6L7 1015 aa6.8□□□□□ -1.32
AC055720.1-201ENST00000539552 VARSP26640 1264 aaKnown RBP6.79□□□□□ -1.32
AC055720.1-201ENST00000539552 CECR2Q9BXF3 1484 aa6.79□□□□□ -1.32
AC055720.1-201ENST00000539552 TESPA1A2RU30 521 aaPredicted RBP6.78□□□□□ -1.32
AC055720.1-201ENST00000539552 SOBPA7XYQ1 873 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms