RNA–Protein interactions for RNA: ENST00000539310.5

PLS3-209, Transcript of plastin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-209ENST00000539310 MTERF4Q7Z6M4 381 aaKnown RBP5.66□□□□□ -1.5
PLS3-209ENST00000539310 DHX37Q8IY37 1157 aaKnown RBP5.66□□□□□ -1.5
PLS3-209ENST00000539310 CIZ1Q9ULV3 898 aaPredicted RBP5.66□□□□□ -1.5
PLS3-209ENST00000539310 NLRP1Q9C000 1473 aa5.66□□□□□ -1.5
PLS3-209ENST00000539310 TERF1P54274 439 aa5.66□□□□□ -1.5
PLS3-209ENST00000539310 PROM2Q8N271 834 aa5.66□□□□□ -1.5
PLS3-209ENST00000539310 PPP1R9BQ96SB3 815 aa5.66□□□□□ -1.5
PLS3-209ENST00000539310 KIAA0586Q9BVV6 1533 aa5.66□□□□□ -1.5
PLS3-209ENST00000539310 NINLQ9Y2I6 1382 aa5.66□□□□□ -1.5
PLS3-209ENST00000539310 PTMAP06454 111 aaKnown RBP5.66□□□□□ -1.5
PLS3-209ENST00000539310 RAB3GAP1Q15042 981 aa5.66□□□□□ -1.5
PLS3-209ENST00000539310 CAVIN1Q6NZI2 390 aaKnown RBP5.66□□□□□ -1.5
PLS3-209ENST00000539310 NGEFQ8N5V2 710 aa5.66□□□□□ -1.5
PLS3-209ENST00000539310 PUS7Q96PZ0 661 aaKnown RBP5.66□□□□□ -1.5
PLS3-209ENST00000539310 VASPP50552 380 aaPredicted RBP5.65□□□□□ -1.5
PLS3-209ENST00000539310 CSPP1Q1MSJ5 1256 aa5.65□□□□□ -1.5
PLS3-209ENST00000539310 ITPRIPQ8IWB1 547 aa5.65□□□□□ -1.5
PLS3-209ENST00000539310 GAPVD1Q14C86 1478 aa5.65□□□□□ -1.5
PLS3-209ENST00000539310 SAMD9Q5K651 1589 aa5.65□□□□□ -1.5
PLS3-209ENST00000539310 SSFA2P28290 1259 aa5.65□□□□□ -1.51
PLS3-209ENST00000539310 MCTP1Q6DN14 999 aa5.65□□□□□ -1.51
PLS3-209ENST00000539310 SMC5Q8IY18 1101 aa5.65□□□□□ -1.51
PLS3-209ENST00000539310 SMAP1Q8IYB5 467 aaPredicted RBP5.65□□□□□ -1.51
PLS3-209ENST00000539310 CUL7Q14999 1698 aa5.65□□□□□ -1.51
PLS3-209ENST00000539310 TOPBP1Q92547 1522 aa5.65□□□□□ -1.51
PLS3-209ENST00000539310 ARHGEF12Q9NZN5 1544 aa5.65□□□□□ -1.51
PLS3-209ENST00000539310 CC2D2AQ9P2K1 1620 aa5.65□□□□□ -1.51
PLS3-209ENST00000539310 DYNC1I1O14576 645 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 HNRNPMP52272 730 aaKnown RBP eCLIP5.64□□□□□ -1.51
PLS3-209ENST00000539310 KLHL40Q2TBA0 621 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 ZKSCAN2Q63HK3 967 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 DZIP1LQ8IYY4 767 aaKnown RBP5.64□□□□□ -1.51
PLS3-209ENST00000539310 NOL7Q9UMY1 257 aaKnown RBP5.64□□□□□ -1.51
PLS3-209ENST00000539310 CAMSAP2Q08AD1 1489 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 PRAG1Q86YV5 1406 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 CTTNBP2Q8WZ74 1663 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 MVPQ14764 893 aaKnown RBP5.64□□□□□ -1.51
PLS3-209ENST00000539310 LNPKQ9C0E8 428 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 NESP48681 1621 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 PRG4Q92954 1404 aaPredicted RBP5.64□□□□□ -1.51
PLS3-209ENST00000539310 COL17A1Q9UMD9 1497 aaPredicted RBP5.64□□□□□ -1.51
PLS3-209ENST00000539310 LRRIQ1Q96JM4 1722 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 K7ELQ4 463 aaPredicted RBP5.64□□□□□ -1.51
PLS3-209ENST00000539310 SNX21Q969T3 373 aa5.64□□□□□ -1.51
PLS3-209ENST00000539310 ZNF608Q9ULD9 1512 aaPredicted RBP5.63□□□□□ -1.51
PLS3-209ENST00000539310 DNMT1P26358 1616 aaKnown RBP5.63□□□□□ -1.51
PLS3-209ENST00000539310 PLEKHD1A6NEE1 506 aa5.63□□□□□ -1.51
PLS3-209ENST00000539310 TCP11L2Q8N4U5 519 aa5.63□□□□□ -1.51
PLS3-209ENST00000539310 SMC4Q9NTJ3 1288 aa5.63□□□□□ -1.51
PLS3-209ENST00000539310 BAG4O95429 457 aaKnown RBP5.63□□□□□ -1.51
PLS3-209ENST00000539310 HS1BP3Q53T59 392 aa5.63□□□□□ -1.51
PLS3-209ENST00000539310 ZMYM3Q14202 1370 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 ZNF500O60304 480 aaPredicted RBP5.62□□□□□ -1.51
PLS3-209ENST00000539310 CHRM1P11229 460 aaPredicted RBP5.62□□□□□ -1.51
PLS3-209ENST00000539310 RBM25P49756 843 aaKnown RBP5.62□□□□□ -1.51
PLS3-209ENST00000539310 ZSCAN23Q3MJ62 389 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 SASS6Q6UVJ0 657 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 RNF214Q8ND24 703 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 RBM42Q9BTD8 480 aaKnown RBP5.62□□□□□ -1.51
PLS3-209ENST00000539310 ZKSCAN5Q9Y2L8 839 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 ZBTB12Q9Y330 459 aaPredicted RBP5.62□□□□□ -1.51
PLS3-209ENST00000539310 DNMBPQ6XZF7 1577 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 PRPF40AO75400 957 aaKnown RBP5.62□□□□□ -1.51
PLS3-209ENST00000539310 DDIT3P35638 169 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 PRIM1P49642 420 aaKnown RBP5.62□□□□□ -1.51
PLS3-209ENST00000539310 CBX1P83916 185 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 RBSNQ9H1K0 784 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 DDX19BQ9UMR2 479 aa5.62□□□□□ -1.51
PLS3-209ENST00000539310 CD2BP2O95400 341 aaKnown RBP5.61□□□□□ -1.51
PLS3-209ENST00000539310 MORC1Q86VD1 984 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 RUNDC1Q96C34 613 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 CCDC94Q9BW85 323 aaPredicted RBP5.61□□□□□ -1.51
PLS3-209ENST00000539310 CCDC39Q9UFE4 941 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 GPRASP1Q5JY77 1395 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 C9orf84Q5VXU9 1444 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 MAGI2Q86UL8 1455 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 ANKRD45Q5TZF3 282 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 MPNDQ8N594 471 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 GAS2L2Q8NHY3 880 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 NUCB2P80303 420 aa5.61□□□□□ -1.51
PLS3-209ENST00000539310 BBXQ8WY36 941 aaPredicted RBP5.61□□□□□ -1.51
PLS3-209ENST00000539310 PIK3C2GO75747 1445 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 MCM5P33992 734 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 ZNF445P59923 1031 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 KIAA2012Q0VF49 1180 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 HDAC1Q13547 482 aaPredicted RBP5.6□□□□□ -1.51
PLS3-209ENST00000539310 FOXD4L5Q5VV16 416 aaPredicted RBP5.6□□□□□ -1.51
PLS3-209ENST00000539310 WDR63Q8IWG1 891 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 FOXD4L4Q8WXT5 416 aaPredicted RBP5.6□□□□□ -1.51
PLS3-209ENST00000539310 RBM27Q9P2N5 1060 aaKnown RBP5.6□□□□□ -1.51
PLS3-209ENST00000539310 SSUH2Q9Y2M2 353 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 TROQ12816 1431 aaPredicted RBP5.6□□□□□ -1.51
PLS3-209ENST00000539310 GPATCH8Q9UKJ3 1502 aaKnown RBP5.6□□□□□ -1.51
PLS3-209ENST00000539310 SYCE3A1L190 88 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 U2AF1L5P0DN76 240 aaPredicted RBP5.6□□□□□ -1.51
PLS3-209ENST00000539310 TRIM27P14373 513 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 U2AF1Q01081 240 aaKnown RBP eCLIP5.6□□□□□ -1.51
PLS3-209ENST00000539310 DMTNQ08495 405 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 TSC1Q92574 1164 aa5.6□□□□□ -1.51
PLS3-209ENST00000539310 TSR2Q969E8 191 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms