RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 TECPR2O15040 1411 aa25.73■■□□□ 1.71
PDCD2-207ENST00000539212 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
PDCD2-207ENST00000539212 SOS2Q07890 1332 aaPredicted RBP25.73■■□□□ 1.71
PDCD2-207ENST00000539212 PLEKHH1Q9ULM0 1364 aa25.72■■□□□ 1.71
PDCD2-207ENST00000539212 FMN2Q9NZ56 1722 aa25.72■■□□□ 1.71
PDCD2-207ENST00000539212 TMEM132EQ6IEE7 984 aa25.72■■□□□ 1.71
PDCD2-207ENST00000539212 RXRBP28702 533 aa25.71■■□□□ 1.71
PDCD2-207ENST00000539212 WAPLQ7Z5K2 1190 aa25.71■■□□□ 1.71
PDCD2-207ENST00000539212 LRPPRCP42704 1394 aaKnown RBP25.7■■□□□ 1.71
PDCD2-207ENST00000539212 ADAMTS2O95450 1211 aa25.7■■□□□ 1.7
PDCD2-207ENST00000539212 RGPD8O14715 1765 aaPredicted RBP25.69■■□□□ 1.7
PDCD2-207ENST00000539212 PXDNQ92626 1479 aa25.68■■□□□ 1.7
PDCD2-207ENST00000539212 NUTM2FA1L443 756 aa25.68■■□□□ 1.7
PDCD2-207ENST00000539212 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
PDCD2-207ENST00000539212 CDK12Q9NYV4 1490 aaPredicted RBP25.67■■□□□ 1.7
PDCD2-207ENST00000539212 RGS12O14924 1447 aa25.67■■□□□ 1.7
PDCD2-207ENST00000539212 YTHDC2Q9H6S0 1430 aaKnown RBP25.66■■□□□ 1.7
PDCD2-207ENST00000539212 ESCO1Q5FWF5 840 aa25.66■■□□□ 1.7
PDCD2-207ENST00000539212 XPCQ01831 940 aaPredicted RBP25.65■■□□□ 1.7
PDCD2-207ENST00000539212 UPF1Q92900 1129 aaKnown RBP eCLIP25.65■■□□□ 1.7
PDCD2-207ENST00000539212 ABCC11Q96J66 1382 aa25.65■■□□□ 1.7
PDCD2-207ENST00000539212 RAB3GAP2Q9H2M9 1393 aa25.65■■□□□ 1.7
PDCD2-207ENST00000539212 NRXN1Q9ULB1 1477 aa25.64■■□□□ 1.69
PDCD2-207ENST00000539212 MYOM2P54296 1465 aa25.63■■□□□ 1.69
PDCD2-207ENST00000539212 NGLY1Q96IV0 654 aa25.62■■□□□ 1.69
PDCD2-207ENST00000539212 KIF1AQ12756 1690 aa25.61■■□□□ 1.69
PDCD2-207ENST00000539212 QTRT2Q9H974 415 aaKnown RBP25.61■■□□□ 1.69
PDCD2-207ENST00000539212 NPHP3Q7Z494 1330 aa25.6■■□□□ 1.69
PDCD2-207ENST00000539212 FOXO3O43524 673 aa25.59■■□□□ 1.69
PDCD2-207ENST00000539212 CFAP70Q5T0N1 1121 aa25.58■■□□□ 1.69
PDCD2-207ENST00000539212 RBM6P78332 1123 aaKnown RBP25.57■■□□□ 1.68
PDCD2-207ENST00000539212 C14orf93Q9H972 538 aaKnown RBP25.56■■□□□ 1.68
PDCD2-207ENST00000539212 USP21Q9UK80 565 aa25.55■■□□□ 1.68
PDCD2-207ENST00000539212 USP32Q8NFA0 1604 aa25.53■■□□□ 1.68
PDCD2-207ENST00000539212 ADGRB1O14514 1584 aa25.52■■□□□ 1.68
PDCD2-207ENST00000539212 SAFB2Q14151 953 aaKnown RBP eCLIP25.51■■□□□ 1.67
PDCD2-207ENST00000539212 ATRNO75882 1429 aa25.51■■□□□ 1.67
PDCD2-207ENST00000539212 DHX57Q6P158 1386 aaKnown RBP25.5■■□□□ 1.67
PDCD2-207ENST00000539212 ABCA3Q99758 1704 aa25.5■■□□□ 1.67
PDCD2-207ENST00000539212 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
PDCD2-207ENST00000539212 DLC1Q96QB1 1528 aa25.49■■□□□ 1.67
PDCD2-207ENST00000539212 ACIN1Q9UKV3 1341 aaKnown RBP25.49■■□□□ 1.67
PDCD2-207ENST00000539212 FNBP4Q8N3X1 1017 aaPredicted RBP25.49■■□□□ 1.67
PDCD2-207ENST00000539212 BCL9LQ86UU0 1499 aa25.48■■□□□ 1.67
PDCD2-207ENST00000539212 PRAM1Q96QH2 718 aa25.48■■□□□ 1.67
PDCD2-207ENST00000539212 TRPC5Q9UL62 973 aaPredicted RBP25.48■■□□□ 1.67
PDCD2-207ENST00000539212 ADGRB2O60241 1585 aa25.47■■□□□ 1.67
PDCD2-207ENST00000539212 SIRT1Q96EB6 747 aa25.46■■□□□ 1.67
PDCD2-207ENST00000539212 SPATA31A3Q5VYP0 1347 aa25.45■■□□□ 1.66
PDCD2-207ENST00000539212 PLCH1Q4KWH8 1693 aa25.44■■□□□ 1.66
PDCD2-207ENST00000539212 KRT28Q7Z3Y7 464 aa25.43■■□□□ 1.66
PDCD2-207ENST00000539212 EP400Q96L91 3159 aa25.43■■□□□ 1.66
PDCD2-207ENST00000539212 PLEKHG5O94827 1062 aa25.42■■□□□ 1.66
PDCD2-207ENST00000539212 PHF8Q9UPP1 1060 aa25.42■■□□□ 1.66
PDCD2-207ENST00000539212 TNS3Q68CZ2 1445 aa25.42■■□□□ 1.66
PDCD2-207ENST00000539212 ARHGEF28Q8N1W1 1705 aaKnown RBP25.41■■□□□ 1.66
PDCD2-207ENST00000539212 GLI3P10071 1580 aa25.41■■□□□ 1.66
PDCD2-207ENST00000539212 KDM2AQ9Y2K7 1162 aa25.41■■□□□ 1.66
PDCD2-207ENST00000539212 TRPM3Q9HCF6 1732 aaPredicted RBP25.4■■□□□ 1.66
PDCD2-207ENST00000539212 SLIT2O94813 1529 aa25.39■■□□□ 1.66
PDCD2-207ENST00000539212 POGKQ9P215 609 aa25.39■■□□□ 1.66
PDCD2-207ENST00000539212 TRAK1Q9UPV9 953 aa25.39■■□□□ 1.66
PDCD2-207ENST00000539212 BRWD3Q6RI45 1802 aa25.38■■□□□ 1.65
PDCD2-207ENST00000539212 DCAF11Q8TEB1 546 aa25.38■■□□□ 1.65
PDCD2-207ENST00000539212 HIRIP3Q9BW71 556 aaPredicted RBP25.38■■□□□ 1.65
PDCD2-207ENST00000539212 ATAD2Q6PL18 1390 aa25.38■■□□□ 1.65
PDCD2-207ENST00000539212 CABLES1Q8TDN4 633 aa25.37■■□□□ 1.65
PDCD2-207ENST00000539212 PMFBP1Q8TBY8 1022 aa25.36■■□□□ 1.65
PDCD2-207ENST00000539212 ANKARQ7Z5J8 1434 aa25.36■■□□□ 1.65
PDCD2-207ENST00000539212 MINK1Q8N4C8 1332 aaPredicted RBP25.36■■□□□ 1.65
PDCD2-207ENST00000539212 ALS2Q96Q42 1657 aa25.35■■□□□ 1.65
PDCD2-207ENST00000539212 NWD2Q9ULI1 1742 aa25.34■■□□□ 1.65
PDCD2-207ENST00000539212 RALGAPBQ86X10 1494 aa25.34■■□□□ 1.65
PDCD2-207ENST00000539212 TULP4Q9NRJ4 1543 aa25.33■■□□□ 1.65
PDCD2-207ENST00000539212 GJD4Q96KN9 370 aaPredicted RBP25.33■■□□□ 1.65
PDCD2-207ENST00000539212 PRR36Q9H6K5 1346 aa25.33■■□□□ 1.64
PDCD2-207ENST00000539212 SBNO1A3KN83 1393 aa25.32■■□□□ 1.64
PDCD2-207ENST00000539212 LMOD2Q6P5Q4 547 aa25.32■■□□□ 1.64
PDCD2-207ENST00000539212 PSME1Q06323 249 aa25.31■■□□□ 1.64
PDCD2-207ENST00000539212 CRYBG1Q9Y4K1 1723 aa25.31■■□□□ 1.64
PDCD2-207ENST00000539212 ITSN1Q15811 1721 aa25.3■■□□□ 1.64
PDCD2-207ENST00000539212 NRAPQ86VF7 1730 aa25.3■■□□□ 1.64
PDCD2-207ENST00000539212 HAP1P54257 671 aaPredicted RBP25.3■■□□□ 1.64
PDCD2-207ENST00000539212 UNC5CLQ8IV45 518 aa25.3■■□□□ 1.64
PDCD2-207ENST00000539212 ARHGEF10O15013 1369 aa25.28■■□□□ 1.64
PDCD2-207ENST00000539212 KIAA1210Q9ULL0 1709 aa25.24■■□□□ 1.63
PDCD2-207ENST00000539212 HRCP23327 699 aa25.24■■□□□ 1.63
PDCD2-207ENST00000539212 TOPAZ1Q8N9V7 1692 aa25.23■■□□□ 1.63
PDCD2-207ENST00000539212 ATP7BP35670 1465 aa25.23■■□□□ 1.63
PDCD2-207ENST00000539212 WASLO00401 505 aaPredicted RBP25.23■■□□□ 1.63
PDCD2-207ENST00000539212 EIF3AQ14152 1382 aaKnown RBP25.22■■□□□ 1.63
PDCD2-207ENST00000539212 COL14A1Q05707 1796 aaKnown RBP25.21■■□□□ 1.63
PDCD2-207ENST00000539212 GPRASP1Q5JY77 1395 aa25.19■■□□□ 1.62
PDCD2-207ENST00000539212 PHRF1Q9P1Y6 1649 aaKnown RBP25.19■■□□□ 1.62
PDCD2-207ENST00000539212 FAM83GA6ND36 823 aa25.19■■□□□ 1.62
PDCD2-207ENST00000539212 VPS72Q15906 364 aa25.19■■□□□ 1.62
PDCD2-207ENST00000539212 CCDC9Q9Y3X0 531 aaKnown RBP25.18■■□□□ 1.62
PDCD2-207ENST00000539212 SEPT12Q8IYM1 358 aa25.16■■□□□ 1.62
PDCD2-207ENST00000539212 STAC3Q96MF2 364 aa25.16■■□□□ 1.62
PDCD2-207ENST00000539212 NGDNQ8NEJ9 315 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms