RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 METP08581 1390 aa27.56■■■□□ 2
CDH5-202ENST00000539168 LTKP29376 864 aa27.56■■■□□ 2
CDH5-202ENST00000539168 DIP2AQ14689 1571 aa27.56■■■□□ 2
CDH5-202ENST00000539168 TMC1Q8TDI8 760 aa27.56■■■□□ 2
CDH5-202ENST00000539168 SENP3Q9H4L4 574 aaPredicted RBP27.55■■■□□ 2
CDH5-202ENST00000539168 CPS1P31327 1500 aa27.54■■■□□ 2
CDH5-202ENST00000539168 MED14O60244 1454 aa27.54■■■□□ 2
CDH5-202ENST00000539168 CCDC184Q52MB2 194 aa27.53■■■□□ 2
CDH5-202ENST00000539168 AMER1Q5JTC6 1135 aaPredicted RBP27.53■■■□□ 2
CDH5-202ENST00000539168 CNGB1Q14028 1251 aaPredicted RBP27.52■■■□□ 2
CDH5-202ENST00000539168 CC2D1BQ5T0F9 858 aaKnown RBP27.52■■■□□ 2
CDH5-202ENST00000539168 TBX22Q9Y458 520 aa27.52■■■□□ 2
CDH5-202ENST00000539168 SAFB2Q14151 953 aaKnown RBP eCLIP27.51■■□□□ 1.99
CDH5-202ENST00000539168 MINK1Q8N4C8 1332 aaPredicted RBP27.5■■□□□ 1.99
CDH5-202ENST00000539168 SRPK2P78362 688 aaKnown RBP27.49■■□□□ 1.99
CDH5-202ENST00000539168 ANKRD36BQ8N2N9 1353 aa27.49■■□□□ 1.99
CDH5-202ENST00000539168 USP32Q8NFA0 1604 aa27.47■■□□□ 1.99
CDH5-202ENST00000539168 FAM9BQ8IZU0 186 aa27.46■■□□□ 1.99
CDH5-202ENST00000539168 SLC12A5Q9H2X9 1139 aa27.46■■□□□ 1.99
CDH5-202ENST00000539168 CABP2Q9NPB3 220 aa27.46■■□□□ 1.99
CDH5-202ENST00000539168 PIK3R4Q99570 1358 aa27.44■■□□□ 1.98
CDH5-202ENST00000539168 PNISRQ8TF01 805 aaKnown RBP27.44■■□□□ 1.98
CDH5-202ENST00000539168 ANKLE2Q86XL3 938 aa27.43■■□□□ 1.98
CDH5-202ENST00000539168 CDK19Q9BWU1 502 aa27.43■■□□□ 1.98
CDH5-202ENST00000539168 CARD14Q9BXL6 1004 aa27.43■■□□□ 1.98
CDH5-202ENST00000539168 HNRNPUQ00839 825 aaKnown RBP eCLIP27.43■■□□□ 1.98
CDH5-202ENST00000539168 WAPLQ7Z5K2 1190 aa27.43■■□□□ 1.98
CDH5-202ENST00000539168 NSD3Q9BZ95 1437 aa27.42■■□□□ 1.98
CDH5-202ENST00000539168 TERF2IPQ9NYB0 399 aa27.42■■□□□ 1.98
CDH5-202ENST00000539168 NSD2O96028 1365 aa27.41■■□□□ 1.98
CDH5-202ENST00000539168 PLEKHH1Q9ULM0 1364 aa27.41■■□□□ 1.98
CDH5-202ENST00000539168 CGNL1Q0VF96 1302 aa27.39■■□□□ 1.98
CDH5-202ENST00000539168 INSRP06213 1382 aa27.39■■□□□ 1.98
CDH5-202ENST00000539168 PTCH1Q13635 1447 aa27.39■■□□□ 1.97
CDH5-202ENST00000539168 WASLO00401 505 aaPredicted RBP27.38■■□□□ 1.97
CDH5-202ENST00000539168 SLC26A8Q96RN1 970 aa27.37■■□□□ 1.97
CDH5-202ENST00000539168 ADGRB2O60241 1585 aa27.37■■□□□ 1.97
CDH5-202ENST00000539168 PPP2R1AP30153 589 aa27.36■■□□□ 1.97
CDH5-202ENST00000539168 HDGFL2Q7Z4V5 671 aaPredicted RBP27.36■■□□□ 1.97
CDH5-202ENST00000539168 ROBO2Q9HCK4 1378 aa27.35■■□□□ 1.97
CDH5-202ENST00000539168 ATP7BP35670 1465 aa27.34■■□□□ 1.97
CDH5-202ENST00000539168 PTPRUQ92729 1446 aa27.33■■□□□ 1.97
CDH5-202ENST00000539168 AMOTL2Q9Y2J4 779 aa27.33■■□□□ 1.97
CDH5-202ENST00000539168 ZBED9Q6R2W3 1325 aa27.32■■□□□ 1.96
CDH5-202ENST00000539168 A0A1W2PP64 1363 aa27.32■■□□□ 1.96
CDH5-202ENST00000539168 XRN1Q8IZH2 1706 aaKnown RBP27.3■■□□□ 1.96
CDH5-202ENST00000539168 MORC1Q86VD1 984 aa27.28■■□□□ 1.96
CDH5-202ENST00000539168 CD163L1Q9NR16 1453 aa27.27■■□□□ 1.96
CDH5-202ENST00000539168 CABP1Q9NZU7 370 aa27.27■■□□□ 1.96
CDH5-202ENST00000539168 CCDC61Q9Y6R9 512 aa27.26■■□□□ 1.95
CDH5-202ENST00000539168 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.24■■□□□ 1.95
CDH5-202ENST00000539168 NUDT16Q96DE0 195 aaKnown RBP27.24■■□□□ 1.95
CDH5-202ENST00000539168 PPIP5K1Q6PFW1 1433 aa27.23■■□□□ 1.95
CDH5-202ENST00000539168 NPHP4O75161 1426 aaPredicted RBP27.22■■□□□ 1.95
CDH5-202ENST00000539168 GTF3C3Q9Y5Q9 886 aa27.22■■□□□ 1.95
CDH5-202ENST00000539168 POLR3AO14802 1390 aaPredicted RBP27.2■■□□□ 1.95
CDH5-202ENST00000539168 CHD2O14647 1828 aaKnown RBP27.2■■□□□ 1.94
CDH5-202ENST00000539168 CPSF1Q10570 1443 aaKnown RBP27.2■■□□□ 1.94
CDH5-202ENST00000539168 ANKRD26Q9UPS8 1709 aa27.19■■□□□ 1.94
CDH5-202ENST00000539168 WDR43Q15061 677 aaKnown RBP eCLIP27.19■■□□□ 1.94
CDH5-202ENST00000539168 ZNF692Q9BU19 519 aaPredicted RBP27.19■■□□□ 1.94
CDH5-202ENST00000539168 SCAF1Q9H7N4 1312 aaKnown RBP27.19■■□□□ 1.94
CDH5-202ENST00000539168 CDC42BPGQ6DT37 1551 aa27.19■■□□□ 1.94
CDH5-202ENST00000539168 EDC4Q6P2E9 1401 aaKnown RBP27.17■■□□□ 1.94
CDH5-202ENST00000539168 BLMP54132 1417 aaPredicted RBP27.17■■□□□ 1.94
CDH5-202ENST00000539168 KCNA6P17658 529 aa27.14■■□□□ 1.94
CDH5-202ENST00000539168 KIF20BQ96Q89 1820 aa27.14■■□□□ 1.94
CDH5-202ENST00000539168 TOPAZ1Q8N9V7 1692 aa27.14■■□□□ 1.94
CDH5-202ENST00000539168 ITSN1Q15811 1721 aa27.13■■□□□ 1.93
CDH5-202ENST00000539168 FYB1O15117 783 aa27.13■■□□□ 1.93
CDH5-202ENST00000539168 CFAP53Q96M91 514 aa27.13■■□□□ 1.93
CDH5-202ENST00000539168 PLEKHG3A1L390 1219 aa27.12■■□□□ 1.93
CDH5-202ENST00000539168 MON2Q7Z3U7 1717 aa27.12■■□□□ 1.93
CDH5-202ENST00000539168 AKAP12Q02952 1782 aa27.11■■□□□ 1.93
CDH5-202ENST00000539168 ANKARQ7Z5J8 1434 aa27.11■■□□□ 1.93
CDH5-202ENST00000539168 PRR36Q9H6K5 1346 aa27.11■■□□□ 1.93
CDH5-202ENST00000539168 GGNBP2Q9H3C7 697 aa27.07■■□□□ 1.92
CDH5-202ENST00000539168 ADAMTS8Q9UP79 889 aa27.07■■□□□ 1.92
CDH5-202ENST00000539168 NWD1Q149M9 1564 aa27.06■■□□□ 1.92
CDH5-202ENST00000539168 PDE3BQ13370 1112 aa27.05■■□□□ 1.92
CDH5-202ENST00000539168 NCKAP5LQ9HCH0 1330 aa27.05■■□□□ 1.92
CDH5-202ENST00000539168 MTHFSP49914 203 aa27.04■■□□□ 1.92
CDH5-202ENST00000539168 NGEFQ8N5V2 710 aa27.04■■□□□ 1.92
CDH5-202ENST00000539168 TNNT2P45379 298 aaPredicted RBP27.03■■□□□ 1.92
CDH5-202ENST00000539168 FMN2Q9NZ56 1722 aa27.02■■□□□ 1.92
CDH5-202ENST00000539168 SMG6Q86US8 1419 aaKnown RBP27.02■■□□□ 1.92
CDH5-202ENST00000539168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.01■■□□□ 1.91
CDH5-202ENST00000539168 ACEP12821 1306 aa27■■□□□ 1.91
CDH5-202ENST00000539168 ADGRL3Q9HAR2 1447 aa27■■□□□ 1.91
CDH5-202ENST00000539168 USP6P35125 1406 aa26.98■■□□□ 1.91
CDH5-202ENST00000539168 NKTRP30414 1462 aaKnown RBP26.98■■□□□ 1.91
CDH5-202ENST00000539168 NRKQ7Z2Y5 1582 aa26.97■■□□□ 1.91
CDH5-202ENST00000539168 KDM4FA0A1W2PPD8 638 aa26.97■■□□□ 1.91
CDH5-202ENST00000539168 NEFLP07196 543 aa26.97■■□□□ 1.91
CDH5-202ENST00000539168 COG3Q96JB2 828 aa26.97■■□□□ 1.91
CDH5-202ENST00000539168 NUDCQ9Y266 331 aa26.97■■□□□ 1.91
CDH5-202ENST00000539168 NALCNQ8IZF0 1738 aa26.97■■□□□ 1.91
CDH5-202ENST00000539168 AATKQ6ZMQ8 1374 aa26.96■■□□□ 1.91
CDH5-202ENST00000539168 TTC21AQ8NDW8 1320 aa26.96■■□□□ 1.91
CDH5-202ENST00000539168 SHPRHQ149N8 1683 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms