RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SLF2Q8IX21 1173 aa7.02□□□□□ -1.29
SNHG1-208ENST00000538266 KDM4CQ9H3R0 1056 aa7.02□□□□□ -1.29
SNHG1-208ENST00000538266 MYT1LQ9UL68 1186 aa7.02□□□□□ -1.29
SNHG1-208ENST00000538266 RAPGEF2Q9Y4G8 1499 aa7.01□□□□□ -1.29
SNHG1-208ENST00000538266 SOWAHBA6NEL2 793 aa7.01□□□□□ -1.29
SNHG1-208ENST00000538266 RNF40O75150 1001 aa7.01□□□□□ -1.29
SNHG1-208ENST00000538266 PPP4CP60510 307 aa7.01□□□□□ -1.29
SNHG1-208ENST00000538266 SULF1Q8IWU6 871 aa7.01□□□□□ -1.29
SNHG1-208ENST00000538266 FAM217BQ9NTX9 383 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-208ENST00000538266 BCAMP50895 628 aa7□□□□□ -1.29
SNHG1-208ENST00000538266 RDH13Q8NBN7 331 aa7□□□□□ -1.29
SNHG1-208ENST00000538266 PRXQ9BXM0 1461 aa6.99□□□□□ -1.29
SNHG1-208ENST00000538266 SLC10A3P09131 477 aa6.99□□□□□ -1.29
SNHG1-208ENST00000538266 MS4A1P11836 297 aa6.99□□□□□ -1.29
SNHG1-208ENST00000538266 NUP160Q12769 1436 aa6.99□□□□□ -1.29
SNHG1-208ENST00000538266 KIF21BO75037 1637 aa6.98□□□□□ -1.29
SNHG1-208ENST00000538266 PTPN5P54829 565 aa6.98□□□□□ -1.29
SNHG1-208ENST00000538266 THSD4Q6ZMP0 1018 aa6.98□□□□□ -1.29
SNHG1-208ENST00000538266 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
SNHG1-208ENST00000538266 BEGAINQ9BUH8 593 aa6.98□□□□□ -1.29
SNHG1-208ENST00000538266 FAM117AQ9C073 453 aa6.98□□□□□ -1.29
SNHG1-208ENST00000538266 TSR3Q9UJK0 312 aaKnown RBP6.98□□□□□ -1.29
SNHG1-208ENST00000538266 HPS5Q9UPZ3 1129 aa6.98□□□□□ -1.29
SNHG1-208ENST00000538266 CEP170Q5SW79 1584 aa6.98□□□□□ -1.29
SNHG1-208ENST00000538266 CD46P15529 392 aa6.97□□□□□ -1.29
SNHG1-208ENST00000538266 NECTIN2Q92692 538 aa6.97□□□□□ -1.29
SNHG1-208ENST00000538266 CLASP1Q7Z460 1538 aa6.96□□□□□ -1.29
SNHG1-208ENST00000538266 RNF166Q96A37 237 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-208ENST00000538266 WBP1LQ9NX94 342 aa6.96□□□□□ -1.3
SNHG1-208ENST00000538266 GOLGA3Q08378 1498 aa6.96□□□□□ -1.3
SNHG1-208ENST00000538266 CTTNBP2Q8WZ74 1663 aa6.96□□□□□ -1.3
SNHG1-208ENST00000538266 KIAA0586Q9BVV6 1533 aa6.96□□□□□ -1.3
SNHG1-208ENST00000538266 IQGAP2Q13576 1575 aa6.95□□□□□ -1.3
SNHG1-208ENST00000538266 GCGRP47871 477 aa6.95□□□□□ -1.3
SNHG1-208ENST00000538266 DDRGK1Q96HY6 314 aa6.95□□□□□ -1.3
SNHG1-208ENST00000538266 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
SNHG1-208ENST00000538266 MMRN1Q13201 1228 aa6.94□□□□□ -1.3
SNHG1-208ENST00000538266 NUTM1Q86Y26 1132 aa6.94□□□□□ -1.3
SNHG1-208ENST00000538266 KDM4AO75164 1064 aa6.93□□□□□ -1.3
SNHG1-208ENST00000538266 CFHP08603 1231 aa6.93□□□□□ -1.3
SNHG1-208ENST00000538266 KMT5BQ4FZB7 885 aa6.93□□□□□ -1.3
SNHG1-208ENST00000538266 SHROOM2Q13796 1616 aa6.92□□□□□ -1.3
SNHG1-208ENST00000538266 PLEKHG3A1L390 1219 aa6.92□□□□□ -1.3
SNHG1-208ENST00000538266 SPIRE2Q8WWL2 714 aa6.92□□□□□ -1.3
SNHG1-208ENST00000538266 PRR14Q9BWN1 585 aa6.92□□□□□ -1.3
SNHG1-208ENST00000538266 HCSTQ9UBK5 93 aa6.92□□□□□ -1.3
SNHG1-208ENST00000538266 ACTN4O43707 911 aaKnown RBP6.91□□□□□ -1.3
SNHG1-208ENST00000538266 APLP1P51693 650 aa6.91□□□□□ -1.3
SNHG1-208ENST00000538266 DIXDC1Q155Q3 683 aa6.91□□□□□ -1.3
SNHG1-208ENST00000538266 NYAP1Q6ZVC0 841 aa6.91□□□□□ -1.3
SNHG1-208ENST00000538266 TBC1D2Q9BYX2 928 aa6.91□□□□□ -1.3
SNHG1-208ENST00000538266 RSPH6AQ9H0K4 717 aa6.91□□□□□ -1.3
SNHG1-208ENST00000538266 PRG4Q92954 1404 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-208ENST00000538266 ARHGEF11O15085 1522 aa6.91□□□□□ -1.3
SNHG1-208ENST00000538266 ATP6V1AP38606 617 aa6.9□□□□□ -1.3
SNHG1-208ENST00000538266 FUT2Q10981 343 aa6.9□□□□□ -1.3
SNHG1-208ENST00000538266 GRIPAP1Q4V328 841 aa6.9□□□□□ -1.3
SNHG1-208ENST00000538266 CARMIL2Q6F5E8 1435 aa6.9□□□□□ -1.31
SNHG1-208ENST00000538266 UGGT2Q9NYU1 1516 aa6.9□□□□□ -1.31
SNHG1-208ENST00000538266 RANGAP1P46060 587 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-208ENST00000538266 USP46P62068 366 aa6.89□□□□□ -1.31
SNHG1-208ENST00000538266 POLR3EQ9NVU0 708 aa6.89□□□□□ -1.31
SNHG1-208ENST00000538266 ATP1B4Q9UN42 357 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-208ENST00000538266 RIMBP3CA6NJZ7 1639 aa6.89□□□□□ -1.31
SNHG1-208ENST00000538266 RIMBP3BA6NNM3 1639 aa6.89□□□□□ -1.31
SNHG1-208ENST00000538266 RIMBP3Q9UFD9 1639 aa6.89□□□□□ -1.31
SNHG1-208ENST00000538266 PUS10Q3MIT2 529 aaKnown RBP6.88□□□□□ -1.31
SNHG1-208ENST00000538266 PCDHB3Q9Y5E6 796 aa6.88□□□□□ -1.31
SNHG1-208ENST00000538266 KIAA0556O60303 1618 aa6.87□□□□□ -1.31
SNHG1-208ENST00000538266 TNIKQ9UKE5 1360 aa6.87□□□□□ -1.31
SNHG1-208ENST00000538266 NDUFV2P19404 249 aa6.87□□□□□ -1.31
SNHG1-208ENST00000538266 TMEM132AQ24JP5 1023 aa6.87□□□□□ -1.31
SNHG1-208ENST00000538266 MYSM1Q5VVJ2 828 aa6.87□□□□□ -1.31
SNHG1-208ENST00000538266 RIC3Q7Z5B4 369 aa6.87□□□□□ -1.31
SNHG1-208ENST00000538266 ERCC6L2Q5T890 1561 aa6.86□□□□□ -1.31
SNHG1-208ENST00000538266 EFCAB5A4FU69 1503 aa6.86□□□□□ -1.31
SNHG1-208ENST00000538266 MOXD2PA6NHM9 499 aa6.86□□□□□ -1.31
SNHG1-208ENST00000538266 SKIV2LQ15477 1246 aaKnown RBP6.86□□□□□ -1.31
SNHG1-208ENST00000538266 SCUBE3Q8IX30 993 aa6.86□□□□□ -1.31
SNHG1-208ENST00000538266 DISP1Q96F81 1524 aa6.86□□□□□ -1.31
SNHG1-208ENST00000538266 TTBK1Q5TCY1 1321 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-208ENST00000538266 LOC105371045A0A1W2PR82 267 aa6.85□□□□□ -1.31
SNHG1-208ENST00000538266 HOXA2O43364 376 aa6.85□□□□□ -1.31
SNHG1-208ENST00000538266 COPS2P61201 443 aa6.85□□□□□ -1.31
SNHG1-208ENST00000538266 MORN1Q5T089 497 aa6.85□□□□□ -1.31
SNHG1-208ENST00000538266 SLC27A5Q9Y2P5 690 aa6.85□□□□□ -1.31
SNHG1-208ENST00000538266 SAMD9Q5K651 1589 aa6.85□□□□□ -1.31
SNHG1-208ENST00000538266 ARAP1Q96P48 1450 aa6.85□□□□□ -1.31
SNHG1-208ENST00000538266 SPTLC1O15269 473 aa6.84□□□□□ -1.31
SNHG1-208ENST00000538266 NR1I2O75469 434 aa6.84□□□□□ -1.31
SNHG1-208ENST00000538266 FDX1P10109 184 aa6.84□□□□□ -1.31
SNHG1-208ENST00000538266 GUCA2AQ02747 115 aa6.84□□□□□ -1.31
SNHG1-208ENST00000538266 SH3D19Q5HYK7 790 aa6.84□□□□□ -1.31
SNHG1-208ENST00000538266 BLOC1S3Q6QNY0 202 aa6.84□□□□□ -1.31
SNHG1-208ENST00000538266 PROCA1Q8NCQ7 364 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-208ENST00000538266 HLA-CQ95604 372 aa6.84□□□□□ -1.31
SNHG1-208ENST00000538266 GOPCQ9HD26 462 aa6.84□□□□□ -1.31
SNHG1-208ENST00000538266 PTPRGP23470 1445 aa6.84□□□□□ -1.32
SNHG1-208ENST00000538266 CLIP1P30622 1438 aa6.84□□□□□ -1.32
SNHG1-208ENST00000538266 CSPP1Q1MSJ5 1256 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms