RNA–Protein interactions for RNA: ENST00000538013.5

RAD9A-205, Transcript of RAD9 checkpoint clamp component A, human

TSL 5

Gene RAD9A, Length 924 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD9A-205	ENST00000538013	LRPPRC	P42704	1394 aa	Known RBP	28.1	■■■□□ 2.09
RAD9A-205	ENST00000538013	ABCC11	Q96J66	1382 aa		28.08	■■■□□ 2.09
RAD9A-205	ENST00000538013	AFF2	P51816	1311 aa		28.07	■■■□□ 2.08
RAD9A-205	ENST00000538013	STK26	Q9P289	416 aa		28.05	■■■□□ 2.08
RAD9A-205	ENST00000538013	RAB3GAP2	Q9H2M9	1393 aa		28.04	■■■□□ 2.08
RAD9A-205	ENST00000538013	NRXN1	Q9ULB1	1477 aa		28.03	■■■□□ 2.08
RAD9A-205	ENST00000538013	RXRB	P28702	533 aa		28.03	■■■□□ 2.08
RAD9A-205	ENST00000538013	TMEM132E	Q6IEE7	984 aa		28.03	■■■□□ 2.08
RAD9A-205	ENST00000538013	WAPL	Q7Z5K2	1190 aa		28.03	■■■□□ 2.08
RAD9A-205	ENST00000538013	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.02	■■■□□ 2.08
RAD9A-205	ENST00000538013	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.02	■■■□□ 2.08
RAD9A-205	ENST00000538013	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.02	■■■□□ 2.08
RAD9A-205	ENST00000538013	MYOM2	P54296	1465 aa		28.02	■■■□□ 2.08
RAD9A-205	ENST00000538013	PLEKHH1	Q9ULM0	1364 aa		28	■■■□□ 2.07
RAD9A-205	ENST00000538013	C8orf37	Q96NL8	207 aa		28	■■■□□ 2.07
RAD9A-205	ENST00000538013	ESCO1	Q5FWF5	840 aa		27.99	■■■□□ 2.07
RAD9A-205	ENST00000538013	FMN2	Q9NZ56	1722 aa		27.98	■■■□□ 2.07
RAD9A-205	ENST00000538013	NPHP3	Q7Z494	1330 aa		27.98	■■■□□ 2.07
RAD9A-205	ENST00000538013	PXDN	Q92626	1479 aa		27.98	■■■□□ 2.07
RAD9A-205	ENST00000538013	C14orf93	Q9H972	538 aa	Known RBP	27.98	■■■□□ 2.07
RAD9A-205	ENST00000538013	SIRT1	Q96EB6	747 aa		27.96	■■■□□ 2.07
RAD9A-205	ENST00000538013	ADAMTS2	O95450	1211 aa		27.95	■■■□□ 2.06
RAD9A-205	ENST00000538013	CFAP70	Q5T0N1	1121 aa		27.92	■■■□□ 2.06
RAD9A-205	ENST00000538013	NGLY1	Q96IV0	654 aa		27.92	■■■□□ 2.06
RAD9A-205	ENST00000538013	QTRT2	Q9H974	415 aa	Known RBP	27.92	■■■□□ 2.06
RAD9A-205	ENST00000538013	KIF1A	Q12756	1690 aa		27.91	■■■□□ 2.06
RAD9A-205	ENST00000538013	NUTM2F	A1L443	756 aa		27.91	■■■□□ 2.06
RAD9A-205	ENST00000538013	FOXO3	O43524	673 aa		27.91	■■■□□ 2.06
RAD9A-205	ENST00000538013	UPF1	Q92900	1129 aa	Known RBP eCLIP	27.91	■■■□□ 2.06
RAD9A-205	ENST00000538013	DHX57	Q6P158	1386 aa	Known RBP	27.9	■■■□□ 2.06
RAD9A-205	ENST00000538013	RBM6	P78332	1123 aa	Known RBP	27.9	■■■□□ 2.06
RAD9A-205	ENST00000538013	RGS12	O14924	1447 aa		27.89	■■■□□ 2.06
RAD9A-205	ENST00000538013	MARF1	Q9Y4F3	1742 aa	Known RBP	27.88	■■■□□ 2.05
RAD9A-205	ENST00000538013	XPC	Q01831	940 aa	Predicted RBP	27.87	■■■□□ 2.05
RAD9A-205	ENST00000538013	RGPD8	O14715	1765 aa	Predicted RBP	27.86	■■■□□ 2.05
RAD9A-205	ENST00000538013	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.86	■■■□□ 2.05
RAD9A-205	ENST00000538013	DLC1	Q96QB1	1528 aa		27.86	■■■□□ 2.05
RAD9A-205	ENST00000538013	USP21	Q9UK80	565 aa		27.84	■■■□□ 2.05
RAD9A-205	ENST00000538013	ADGRB1	O14514	1584 aa		27.84	■■■□□ 2.05
RAD9A-205	ENST00000538013	HRC	P23327	699 aa		27.83	■■■□□ 2.05
RAD9A-205	ENST00000538013	PRAM1	Q96QH2	718 aa		27.81	■■■□□ 2.04
RAD9A-205	ENST00000538013	TRPC5	Q9UL62	973 aa	Predicted RBP	27.8	■■■□□ 2.04
RAD9A-205	ENST00000538013	SPATA31A3	Q5VYP0	1347 aa		27.8	■■■□□ 2.04
RAD9A-205	ENST00000538013	ADGRB2	O60241	1585 aa		27.79	■■■□□ 2.04
RAD9A-205	ENST00000538013	ATRN	O75882	1429 aa		27.79	■■■□□ 2.04
RAD9A-205	ENST00000538013	BCL9L	Q86UU0	1499 aa		27.76	■■■□□ 2.04
RAD9A-205	ENST00000538013	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.76	■■■□□ 2.03
RAD9A-205	ENST00000538013	KRT28	Q7Z3Y7	464 aa		27.76	■■■□□ 2.03
RAD9A-205	ENST00000538013	PHF8	Q9UPP1	1060 aa		27.76	■■■□□ 2.03
RAD9A-205	ENST00000538013	USP32	Q8NFA0	1604 aa		27.76	■■■□□ 2.03
RAD9A-205	ENST00000538013	DCAF11	Q8TEB1	546 aa		27.74	■■■□□ 2.03
RAD9A-205	ENST00000538013	STAC3	Q96MF2	364 aa		27.74	■■■□□ 2.03
RAD9A-205	ENST00000538013	POGK	Q9P215	609 aa		27.74	■■■□□ 2.03
RAD9A-205	ENST00000538013	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.74	■■■□□ 2.03
RAD9A-205	ENST00000538013	TNS3	Q68CZ2	1445 aa		27.73	■■■□□ 2.03
RAD9A-205	ENST00000538013	ANKAR	Q7Z5J8	1434 aa		27.73	■■■□□ 2.03
RAD9A-205	ENST00000538013	KDM2A	Q9Y2K7	1162 aa		27.72	■■■□□ 2.03
RAD9A-205	ENST00000538013	TRAK1	Q9UPV9	953 aa		27.7	■■■□□ 2.02
RAD9A-205	ENST00000538013	SBNO1	A3KN83	1393 aa		27.7	■■■□□ 2.02
RAD9A-205	ENST00000538013	EP400	Q96L91	3159 aa		27.69	■■■□□ 2.02
RAD9A-205	ENST00000538013	PSME1	Q06323	249 aa		27.69	■■■□□ 2.02
RAD9A-205	ENST00000538013	SLIT2	O94813	1529 aa		27.68	■■■□□ 2.02
RAD9A-205	ENST00000538013	ABCA3	Q99758	1704 aa		27.67	■■■□□ 2.02
RAD9A-205	ENST00000538013	ATAD2	Q6PL18	1390 aa		27.66	■■■□□ 2.02
RAD9A-205	ENST00000538013	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.64	■■■□□ 2.02
RAD9A-205	ENST00000538013	EIF3A	Q14152	1382 aa	Known RBP	27.64	■■■□□ 2.02
RAD9A-205	ENST00000538013	TULP4	Q9NRJ4	1543 aa		27.64	■■■□□ 2.02
RAD9A-205	ENST00000538013	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.64	■■■□□ 2.02
RAD9A-205	ENST00000538013	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.64	■■■□□ 2.01
RAD9A-205	ENST00000538013	ARHGEF10	O15013	1369 aa		27.63	■■■□□ 2.01
RAD9A-205	ENST00000538013	PMFBP1	Q8TBY8	1022 aa		27.63	■■■□□ 2.01
RAD9A-205	ENST00000538013	GJD4	Q96KN9	370 aa	Predicted RBP	27.63	■■■□□ 2.01
RAD9A-205	ENST00000538013	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.63	■■■□□ 2.01
RAD9A-205	ENST00000538013	UNC5CL	Q8IV45	518 aa		27.62	■■■□□ 2.01
RAD9A-205	ENST00000538013	GLI3	P10071	1580 aa		27.61	■■■□□ 2.01
RAD9A-205	ENST00000538013	PRR36	Q9H6K5	1346 aa		27.61	■■■□□ 2.01
RAD9A-205	ENST00000538013	CABLES1	Q8TDN4	633 aa		27.6	■■■□□ 2.01
RAD9A-205	ENST00000538013	PLCH1	Q4KWH8	1693 aa		27.59	■■■□□ 2.01
RAD9A-205	ENST00000538013	RALGAPB	Q86X10	1494 aa		27.59	■■■□□ 2.01
RAD9A-205	ENST00000538013	NWD2	Q9ULI1	1742 aa		27.59	■■■□□ 2.01
RAD9A-205	ENST00000538013	WASL	O00401	505 aa	Predicted RBP	27.59	■■■□□ 2.01
RAD9A-205	ENST00000538013	ALS2	Q96Q42	1657 aa		27.59	■■■□□ 2.01
RAD9A-205	ENST00000538013	KIAA1210	Q9ULL0	1709 aa		27.58	■■■□□ 2.01
RAD9A-205	ENST00000538013	HAP1	P54257	671 aa	Predicted RBP	27.57	■■■□□ 2
RAD9A-205	ENST00000538013	LMOD2	Q6P5Q4	547 aa		27.56	■■■□□ 2
RAD9A-205	ENST00000538013	ITSN1	Q15811	1721 aa		27.55	■■■□□ 2
RAD9A-205	ENST00000538013	GPRASP1	Q5JY77	1395 aa		27.54	■■■□□ 2
RAD9A-205	ENST00000538013	ATP7B	P35670	1465 aa		27.52	■■■□□ 2
RAD9A-205	ENST00000538013	PLEKHG5	O94827	1062 aa		27.51	■■□□□ 1.99
RAD9A-205	ENST00000538013	VPS72	Q15906	364 aa		27.5	■■□□□ 1.99
RAD9A-205	ENST00000538013	BRWD3	Q6RI45	1802 aa		27.5	■■□□□ 1.99
RAD9A-205	ENST00000538013	CRYBG1	Q9Y4K1	1723 aa		27.5	■■□□□ 1.99
RAD9A-205	ENST00000538013	NRAP	Q86VF7	1730 aa		27.48	■■□□□ 1.99
RAD9A-205	ENST00000538013	FAM83G	A6ND36	823 aa		27.47	■■□□□ 1.99
RAD9A-205	ENST00000538013	NGDN	Q8NEJ9	315 aa	Known RBP	27.47	■■□□□ 1.99
RAD9A-205	ENST00000538013	CCDC125	Q86Z20	511 aa		27.46	■■□□□ 1.99
RAD9A-205	ENST00000538013	NUDT16	Q96DE0	195 aa	Known RBP	27.46	■■□□□ 1.99
RAD9A-205	ENST00000538013	TOPAZ1	Q8N9V7	1692 aa		27.46	■■□□□ 1.99
RAD9A-205	ENST00000538013	COL14A1	Q05707	1796 aa	Known RBP	27.45	■■□□□ 1.99
RAD9A-205	ENST00000538013	ONECUT3	O60422	494 aa	Predicted RBP	27.43	■■□□□ 1.98

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