RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 PTCH1Q13635 1447 aa12.26□□□□□ -0.45
DDB1-208ENST00000537120 C1orf167Q5SNV9 1468 aa12.26□□□□□ -0.45
DDB1-208ENST00000537120 NGLY1Q96IV0 654 aa12.25□□□□□ -0.45
DDB1-208ENST00000537120 C8orf37Q96NL8 207 aa12.25□□□□□ -0.45
DDB1-208ENST00000537120 LRPPRCP42704 1394 aaKnown RBP12.25□□□□□ -0.45
DDB1-208ENST00000537120 FOXO3O43524 673 aa12.24□□□□□ -0.45
DDB1-208ENST00000537120 HRCP23327 699 aa12.24□□□□□ -0.45
DDB1-208ENST00000537120 RXRBP28702 533 aa12.24□□□□□ -0.45
DDB1-208ENST00000537120 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDB1-208ENST00000537120 DCAF11Q8TEB1 546 aa12.24□□□□□ -0.45
DDB1-208ENST00000537120 ABCC11Q96J66 1382 aa12.24□□□□□ -0.45
DDB1-208ENST00000537120 AFF2P51816 1311 aa12.23□□□□□ -0.45
DDB1-208ENST00000537120 NALCNQ8IZF0 1738 aa12.23□□□□□ -0.45
DDB1-208ENST00000537120 NPHP3Q7Z494 1330 aa12.22□□□□□ -0.45
DDB1-208ENST00000537120 XPCQ01831 940 aaPredicted RBP12.22□□□□□ -0.45
DDB1-208ENST00000537120 SIRT1Q96EB6 747 aa12.22□□□□□ -0.45
DDB1-208ENST00000537120 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.45
DDB1-208ENST00000537120 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
DDB1-208ENST00000537120 SHPRHQ149N8 1683 aa12.21□□□□□ -0.45
DDB1-208ENST00000537120 LRP6O75581 1613 aa12.21□□□□□ -0.46
DDB1-208ENST00000537120 SETD1AO15047 1707 aaKnown RBP12.2□□□□□ -0.46
DDB1-208ENST00000537120 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
DDB1-208ENST00000537120 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
DDB1-208ENST00000537120 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
DDB1-208ENST00000537120 TRAK1Q9UPV9 953 aa12.2□□□□□ -0.46
DDB1-208ENST00000537120 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
DDB1-208ENST00000537120 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
DDB1-208ENST00000537120 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
DDB1-208ENST00000537120 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
DDB1-208ENST00000537120 STAC3Q96MF2 364 aa12.19□□□□□ -0.46
DDB1-208ENST00000537120 NHSL1Q5SYE7 1610 aa12.19□□□□□ -0.46
DDB1-208ENST00000537120 PSME1Q06323 249 aa12.18□□□□□ -0.46
DDB1-208ENST00000537120 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
DDB1-208ENST00000537120 KRT28Q7Z3Y7 464 aa12.18□□□□□ -0.46
DDB1-208ENST00000537120 PRAG1Q86YV5 1406 aa12.18□□□□□ -0.46
DDB1-208ENST00000537120 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
DDB1-208ENST00000537120 USP21Q9UK80 565 aa12.17□□□□□ -0.46
DDB1-208ENST00000537120 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
DDB1-208ENST00000537120 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
DDB1-208ENST00000537120 TECPR2O15040 1411 aa12.16□□□□□ -0.46
DDB1-208ENST00000537120 MINK1Q8N4C8 1332 aaPredicted RBP12.15□□□□□ -0.46
DDB1-208ENST00000537120 HIRIP3Q9BW71 556 aaPredicted RBP12.15□□□□□ -0.46
DDB1-208ENST00000537120 MYOM2P54296 1465 aa12.14□□□□□ -0.47
DDB1-208ENST00000537120 PMFBP1Q8TBY8 1022 aa12.14□□□□□ -0.47
DDB1-208ENST00000537120 TRPC5Q9UL62 973 aaPredicted RBP12.14□□□□□ -0.47
DDB1-208ENST00000537120 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
DDB1-208ENST00000537120 NRXN1Q9ULB1 1477 aa12.12□□□□□ -0.47
DDB1-208ENST00000537120 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
DDB1-208ENST00000537120 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
DDB1-208ENST00000537120 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
DDB1-208ENST00000537120 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
DDB1-208ENST00000537120 LAMC1P11047 1609 aa12.11□□□□□ -0.47
DDB1-208ENST00000537120 WASLO00401 505 aaPredicted RBP12.1□□□□□ -0.47
DDB1-208ENST00000537120 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDB1-208ENST00000537120 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
DDB1-208ENST00000537120 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
DDB1-208ENST00000537120 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
DDB1-208ENST00000537120 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
DDB1-208ENST00000537120 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
DDB1-208ENST00000537120 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.47
DDB1-208ENST00000537120 PXDNQ92626 1479 aa12.08□□□□□ -0.47
DDB1-208ENST00000537120 EIF3AQ14152 1382 aaKnown RBP12.08□□□□□ -0.48
DDB1-208ENST00000537120 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
DDB1-208ENST00000537120 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
DDB1-208ENST00000537120 UNC5CLQ8IV45 518 aa12.06□□□□□ -0.48
DDB1-208ENST00000537120 NUDT16Q96DE0 195 aaKnown RBP12.06□□□□□ -0.48
DDB1-208ENST00000537120 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
DDB1-208ENST00000537120 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
DDB1-208ENST00000537120 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
DDB1-208ENST00000537120 KIF1AQ12756 1690 aa12.06□□□□□ -0.48
DDB1-208ENST00000537120 ANKARQ7Z5J8 1434 aa12.05□□□□□ -0.48
DDB1-208ENST00000537120 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
DDB1-208ENST00000537120 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
DDB1-208ENST00000537120 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
DDB1-208ENST00000537120 SIN3AQ96ST3 1273 aa12.04□□□□□ -0.48
DDB1-208ENST00000537120 COL22A1Q8NFW1 1626 aaPredicted RBP12.04□□□□□ -0.48
DDB1-208ENST00000537120 TNS3Q68CZ2 1445 aa12.03□□□□□ -0.48
DDB1-208ENST00000537120 A0A0G2JS52 829 aa12.03□□□□□ -0.48
DDB1-208ENST00000537120 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
DDB1-208ENST00000537120 MYT1Q01538 1121 aa12.03□□□□□ -0.48
DDB1-208ENST00000537120 L3MBTL2Q969R5 705 aa12.03□□□□□ -0.48
DDB1-208ENST00000537120 ADGRB1O14514 1584 aa12.03□□□□□ -0.48
DDB1-208ENST00000537120 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
DDB1-208ENST00000537120 RGS12O14924 1447 aa12.03□□□□□ -0.48
DDB1-208ENST00000537120 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.49
DDB1-208ENST00000537120 ATRNO75882 1429 aa12.02□□□□□ -0.49
DDB1-208ENST00000537120 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
DDB1-208ENST00000537120 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
DDB1-208ENST00000537120 BCL9LQ86UU0 1499 aa12.01□□□□□ -0.49
DDB1-208ENST00000537120 NUTM2GQ5VZR2 741 aa12□□□□□ -0.49
DDB1-208ENST00000537120 VPS72Q15906 364 aa11.99□□□□□ -0.49
DDB1-208ENST00000537120 NBPF8Q3BBV2 869 aa11.99□□□□□ -0.49
DDB1-208ENST00000537120 BTG4Q9NY30 223 aa11.99□□□□□ -0.49
DDB1-208ENST00000537120 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
DDB1-208ENST00000537120 MARF1Q9Y4F3 1742 aaKnown RBP11.99□□□□□ -0.49
DDB1-208ENST00000537120 TULP4Q9NRJ4 1543 aa11.98□□□□□ -0.49
DDB1-208ENST00000537120 ACEP12821 1306 aa11.98□□□□□ -0.49
DDB1-208ENST00000537120 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
DDB1-208ENST00000537120 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
DDB1-208ENST00000537120 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms