RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 ABCC11Q96J66 1382 aa9.47□□□□□ -0.89
IFT88-207ENST00000537103 ASXL1Q8IXJ9 1541 aa9.47□□□□□ -0.89
IFT88-207ENST00000537103 KCNA6P17658 529 aa9.46□□□□□ -0.89
IFT88-207ENST00000537103 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
IFT88-207ENST00000537103 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.9
IFT88-207ENST00000537103 PPP1R15AO75807 674 aaPredicted RBP9.45□□□□□ -0.9
IFT88-207ENST00000537103 NCKAP5LQ9HCH0 1330 aa9.44□□□□□ -0.9
IFT88-207ENST00000537103 CDC42BPGQ6DT37 1551 aa9.44□□□□□ -0.9
IFT88-207ENST00000537103 SBNO2Q9Y2G9 1366 aa9.44□□□□□ -0.9
IFT88-207ENST00000537103 CHGAP10645 457 aaKnown RBP9.43□□□□□ -0.9
IFT88-207ENST00000537103 YTHDC2Q9H6S0 1430 aaKnown RBP9.43□□□□□ -0.9
IFT88-207ENST00000537103 EIF3AQ14152 1382 aaKnown RBP9.43□□□□□ -0.9
IFT88-207ENST00000537103 ARHGEF28Q8N1W1 1705 aaKnown RBP9.42□□□□□ -0.9
IFT88-207ENST00000537103 STRCP1A6NGW2 1772 aa9.42□□□□□ -0.9
IFT88-207ENST00000537103 LRRC7Q96NW7 1537 aa9.42□□□□□ -0.9
IFT88-207ENST00000537103 ADGRF5Q8IZF2 1346 aa9.41□□□□□ -0.9
IFT88-207ENST00000537103 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
IFT88-207ENST00000537103 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
IFT88-207ENST00000537103 ATF5Q9Y2D1 282 aaPredicted RBP9.41□□□□□ -0.9
IFT88-207ENST00000537103 HSPA2P54652 639 aa9.41□□□□□ -0.9
IFT88-207ENST00000537103 SPRYD3Q8NCJ5 442 aa9.41□□□□□ -0.9
IFT88-207ENST00000537103 PTPRUQ92729 1446 aa9.41□□□□□ -0.9
IFT88-207ENST00000537103 CCER1Q8TC90 406 aaPredicted RBP9.4□□□□□ -0.9
IFT88-207ENST00000537103 PUS7Q96PZ0 661 aaKnown RBP9.4□□□□□ -0.9
IFT88-207ENST00000537103 DCAF11Q8TEB1 546 aa9.4□□□□□ -0.9
IFT88-207ENST00000537103 ADGRL3Q9HAR2 1447 aa9.39□□□□□ -0.91
IFT88-207ENST00000537103 XIRP1Q702N8 1843 aaKnown RBP9.39□□□□□ -0.91
IFT88-207ENST00000537103 POTEDQ86YR6 584 aa9.39□□□□□ -0.91
IFT88-207ENST00000537103 METP08581 1390 aa9.38□□□□□ -0.91
IFT88-207ENST00000537103 ANKARQ7Z5J8 1434 aa9.38□□□□□ -0.91
IFT88-207ENST00000537103 SIN3AQ96ST3 1273 aa9.37□□□□□ -0.91
IFT88-207ENST00000537103 KIF1AQ12756 1690 aa9.37□□□□□ -0.91
IFT88-207ENST00000537103 FMN2Q9NZ56 1722 aa9.37□□□□□ -0.91
IFT88-207ENST00000537103 RGL3Q3MIN7 710 aa9.36□□□□□ -0.91
IFT88-207ENST00000537103 NALCNQ8IZF0 1738 aa9.36□□□□□ -0.91
IFT88-207ENST00000537103 BRD4O60885 1362 aaPredicted RBP9.36□□□□□ -0.91
IFT88-207ENST00000537103 ITSN1Q15811 1721 aa9.35□□□□□ -0.91
IFT88-207ENST00000537103 QRICH2Q9H0J4 1663 aa9.35□□□□□ -0.91
IFT88-207ENST00000537103 AMOTL2Q9Y2J4 779 aa9.35□□□□□ -0.91
IFT88-207ENST00000537103 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
IFT88-207ENST00000537103 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.34□□□□□ -0.91
IFT88-207ENST00000537103 TOPAZ1Q8N9V7 1692 aa9.34□□□□□ -0.91
IFT88-207ENST00000537103 TULP4Q9NRJ4 1543 aa9.34□□□□□ -0.91
IFT88-207ENST00000537103 MSH6P52701 1360 aa9.33□□□□□ -0.92
IFT88-207ENST00000537103 NINLQ9Y2I6 1382 aa9.33□□□□□ -0.92
IFT88-207ENST00000537103 ROBO2Q9HCK4 1378 aa9.33□□□□□ -0.92
IFT88-207ENST00000537103 CFAP70Q5T0N1 1121 aa9.33□□□□□ -0.92
IFT88-207ENST00000537103 AHDC1Q5TGY3 1603 aaPredicted RBP9.32□□□□□ -0.92
IFT88-207ENST00000537103 NEUROD1Q13562 356 aa9.32□□□□□ -0.92
IFT88-207ENST00000537103 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
IFT88-207ENST00000537103 TMEM94Q12767 1356 aa9.32□□□□□ -0.92
IFT88-207ENST00000537103 ZNF335Q9H4Z2 1342 aaPredicted RBP9.31□□□□□ -0.92
IFT88-207ENST00000537103 SLC26A8Q96RN1 970 aa9.31□□□□□ -0.92
IFT88-207ENST00000537103 C19orf44Q9H6X5 657 aa9.31□□□□□ -0.92
IFT88-207ENST00000537103 NBPF8Q3BBV2 869 aa9.31□□□□□ -0.92
IFT88-207ENST00000537103 MST1RQ04912 1400 aa9.31□□□□□ -0.92
IFT88-207ENST00000537103 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
IFT88-207ENST00000537103 CADPS2Q86UW7 1296 aa9.3□□□□□ -0.92
IFT88-207ENST00000537103 CENPJQ9HC77 1338 aaPredicted RBP9.3□□□□□ -0.92
IFT88-207ENST00000537103 PROSER2Q86WR7 435 aaPredicted RBP9.29□□□□□ -0.92
IFT88-207ENST00000537103 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
IFT88-207ENST00000537103 CDCA8Q53HL2 280 aa9.28□□□□□ -0.92
IFT88-207ENST00000537103 USP54Q70EL1 1684 aa9.28□□□□□ -0.92
IFT88-207ENST00000537103 ATAD2Q6PL18 1390 aa9.28□□□□□ -0.92
IFT88-207ENST00000537103 USP32Q8NFA0 1604 aa9.28□□□□□ -0.92
IFT88-207ENST00000537103 USP47Q96K76 1375 aa9.27□□□□□ -0.92
IFT88-207ENST00000537103 CARD11Q9BXL7 1154 aa9.27□□□□□ -0.92
IFT88-207ENST00000537103 TOM1O60784 492 aa9.27□□□□□ -0.93
IFT88-207ENST00000537103 ATP7BP35670 1465 aa9.27□□□□□ -0.93
IFT88-207ENST00000537103 C1orf167Q5SNV9 1468 aa9.27□□□□□ -0.93
IFT88-207ENST00000537103 NUTM2DQ5VT03 806 aaPredicted RBP9.26□□□□□ -0.93
IFT88-207ENST00000537103 EVC2Q86UK5 1308 aa9.26□□□□□ -0.93
IFT88-207ENST00000537103 RGL2O15211 777 aa9.25□□□□□ -0.93
IFT88-207ENST00000537103 COL22A1Q8NFW1 1626 aaPredicted RBP9.25□□□□□ -0.93
IFT88-207ENST00000537103 NBPF1Q3BBV0 1214 aa9.25□□□□□ -0.93
IFT88-207ENST00000537103 PRAM1Q96QH2 718 aa9.25□□□□□ -0.93
IFT88-207ENST00000537103 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
IFT88-207ENST00000537103 POGKQ9P215 609 aa9.24□□□□□ -0.93
IFT88-207ENST00000537103 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
IFT88-207ENST00000537103 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
IFT88-207ENST00000537103 AKAP12Q02952 1782 aa9.24□□□□□ -0.93
IFT88-207ENST00000537103 ATF3P18847 181 aa9.24□□□□□ -0.93
IFT88-207ENST00000537103 EIF4G2P78344 907 aaKnown RBP eCLIP9.24□□□□□ -0.93
IFT88-207ENST00000537103 PLEKHH1Q9ULM0 1364 aa9.24□□□□□ -0.93
IFT88-207ENST00000537103 TMEM132EQ6IEE7 984 aa9.23□□□□□ -0.93
IFT88-207ENST00000537103 FBXO41Q8TF61 875 aa9.23□□□□□ -0.93
IFT88-207ENST00000537103 ROBO1Q9Y6N7 1651 aa9.23□□□□□ -0.93
IFT88-207ENST00000537103 SHPRHQ149N8 1683 aa9.23□□□□□ -0.93
IFT88-207ENST00000537103 SPDYE4A6NLX3 237 aa9.23□□□□□ -0.93
IFT88-207ENST00000537103 SBNO1A3KN83 1393 aa9.23□□□□□ -0.93
IFT88-207ENST00000537103 MON2Q7Z3U7 1717 aa9.23□□□□□ -0.93
IFT88-207ENST00000537103 PLEKHG3A1L390 1219 aa9.22□□□□□ -0.93
IFT88-207ENST00000537103 TESK2Q96S53 571 aa9.22□□□□□ -0.93
IFT88-207ENST00000537103 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
IFT88-207ENST00000537103 TRAK1Q9UPV9 953 aa9.22□□□□□ -0.93
IFT88-207ENST00000537103 TRPM3Q9HCF6 1732 aaPredicted RBP9.22□□□□□ -0.93
IFT88-207ENST00000537103 ABCC6O95255 1503 aa9.22□□□□□ -0.93
IFT88-207ENST00000537103 TMF1P82094 1093 aa9.21□□□□□ -0.93
IFT88-207ENST00000537103 COL16A1Q07092 1604 aaPredicted RBP9.21□□□□□ -0.93
IFT88-207ENST00000537103 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms