RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CPS1P31327 1500 aa16.04■□□□□ 0.16
CDCA3-206ENST00000536241 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
CDCA3-206ENST00000536241 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
CDCA3-206ENST00000536241 PTCH1Q13635 1447 aa16.03■□□□□ 0.16
CDCA3-206ENST00000536241 EVC2Q86UK5 1308 aa16.03■□□□□ 0.16
CDCA3-206ENST00000536241 QRICH2Q9H0J4 1663 aa16.03■□□□□ 0.16
CDCA3-206ENST00000536241 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
CDCA3-206ENST00000536241 CCDC7Q96M83 1385 aa16.02■□□□□ 0.16
CDCA3-206ENST00000536241 CABP2Q9NPB3 220 aa16.02■□□□□ 0.15
CDCA3-206ENST00000536241 WASLO00401 505 aaPredicted RBP16.01■□□□□ 0.15
CDCA3-206ENST00000536241 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
CDCA3-206ENST00000536241 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
CDCA3-206ENST00000536241 STRCP1A6NGW2 1772 aa16.01■□□□□ 0.15
CDCA3-206ENST00000536241 SRPK2P78362 688 aaKnown RBP16■□□□□ 0.15
CDCA3-206ENST00000536241 C14orf37Q86TY3 774 aa16■□□□□ 0.15
CDCA3-206ENST00000536241 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
CDCA3-206ENST00000536241 NWD1Q149M9 1564 aa15.99■□□□□ 0.15
CDCA3-206ENST00000536241 NUTM2FA1L443 756 aa15.97■□□□□ 0.15
CDCA3-206ENST00000536241 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
CDCA3-206ENST00000536241 PUS7Q96PZ0 661 aaKnown RBP15.97■□□□□ 0.15
CDCA3-206ENST00000536241 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.15
CDCA3-206ENST00000536241 TULP4Q9NRJ4 1543 aa15.96■□□□□ 0.15
CDCA3-206ENST00000536241 C19orf44Q9H6X5 657 aa15.96■□□□□ 0.14
CDCA3-206ENST00000536241 TMC1Q8TDI8 760 aa15.95■□□□□ 0.14
CDCA3-206ENST00000536241 NUDT16Q96DE0 195 aaKnown RBP15.94■□□□□ 0.14
CDCA3-206ENST00000536241 SLC12A5Q9H2X9 1139 aa15.94■□□□□ 0.14
CDCA3-206ENST00000536241 LRRC7Q96NW7 1537 aa15.93■□□□□ 0.14
CDCA3-206ENST00000536241 CABP1Q9NZU7 370 aa15.92■□□□□ 0.14
CDCA3-206ENST00000536241 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
CDCA3-206ENST00000536241 NCOA3Q9Y6Q9 1424 aa15.92■□□□□ 0.14
CDCA3-206ENST00000536241 PANK3Q9H999 370 aa15.91■□□□□ 0.14
CDCA3-206ENST00000536241 CCDC61Q9Y6R9 512 aa15.91■□□□□ 0.14
CDCA3-206ENST00000536241 PRR36Q9H6K5 1346 aa15.91■□□□□ 0.14
CDCA3-206ENST00000536241 ADGRB2O60241 1585 aa15.9■□□□□ 0.14
CDCA3-206ENST00000536241 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
CDCA3-206ENST00000536241 ATAD2Q6PL18 1390 aa15.89■□□□□ 0.14
CDCA3-206ENST00000536241 NALCNQ8IZF0 1738 aa15.89■□□□□ 0.13
CDCA3-206ENST00000536241 ATF3P18847 181 aa15.89■□□□□ 0.13
CDCA3-206ENST00000536241 MSH6P52701 1360 aa15.87■□□□□ 0.13
CDCA3-206ENST00000536241 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
CDCA3-206ENST00000536241 LTBP4Q8N2S1 1624 aa15.87■□□□□ 0.13
CDCA3-206ENST00000536241 CADPS2Q86UW7 1296 aa15.86■□□□□ 0.13
CDCA3-206ENST00000536241 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
CDCA3-206ENST00000536241 PER1O15534 1290 aaPredicted RBP15.85■□□□□ 0.13
CDCA3-206ENST00000536241 ESCO1Q5FWF5 840 aa15.85■□□□□ 0.13
CDCA3-206ENST00000536241 PPIP5K1Q6PFW1 1433 aa15.85■□□□□ 0.13
CDCA3-206ENST00000536241 PLEKHG3A1L390 1219 aa15.84■□□□□ 0.13
CDCA3-206ENST00000536241 ORAI2Q96SN7 254 aa15.84■□□□□ 0.13
CDCA3-206ENST00000536241 CARD14Q9BXL6 1004 aa15.84■□□□□ 0.13
CDCA3-206ENST00000536241 ATP7BP35670 1465 aa15.84■□□□□ 0.13
CDCA3-206ENST00000536241 TERF2IPQ9NYB0 399 aa15.84■□□□□ 0.13
CDCA3-206ENST00000536241 CDC42BPGQ6DT37 1551 aa15.84■□□□□ 0.13
CDCA3-206ENST00000536241 RGPD8O14715 1765 aaPredicted RBP15.83■□□□□ 0.13
CDCA3-206ENST00000536241 FMN2Q9NZ56 1722 aa15.83■□□□□ 0.13
CDCA3-206ENST00000536241 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
CDCA3-206ENST00000536241 ANKARQ7Z5J8 1434 aa15.82■□□□□ 0.12
CDCA3-206ENST00000536241 USP32Q8NFA0 1604 aa15.82■□□□□ 0.12
CDCA3-206ENST00000536241 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
CDCA3-206ENST00000536241 ACEP12821 1306 aa15.82■□□□□ 0.12
CDCA3-206ENST00000536241 SLAIN2Q9P270 581 aa15.82■□□□□ 0.12
CDCA3-206ENST00000536241 PHF8Q9UPP1 1060 aa15.82■□□□□ 0.12
CDCA3-206ENST00000536241 MYOM1P52179 1685 aa15.82■□□□□ 0.12
CDCA3-206ENST00000536241 DCCP43146 1447 aa15.82■□□□□ 0.12
CDCA3-206ENST00000536241 CNGB1Q14028 1251 aaPredicted RBP15.81■□□□□ 0.12
CDCA3-206ENST00000536241 NGDNQ8NEJ9 315 aaKnown RBP15.81■□□□□ 0.12
CDCA3-206ENST00000536241 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
CDCA3-206ENST00000536241 KNSTRNQ9Y448 316 aa15.81■□□□□ 0.12
CDCA3-206ENST00000536241 ANKRD36BQ8N2N9 1353 aa15.81■□□□□ 0.12
CDCA3-206ENST00000536241 C1orf167Q5SNV9 1468 aa15.8■□□□□ 0.12
CDCA3-206ENST00000536241 CD163L1Q9NR16 1453 aa15.8■□□□□ 0.12
CDCA3-206ENST00000536241 MST1RQ04912 1400 aa15.79■□□□□ 0.12
CDCA3-206ENST00000536241 A0A1W2PP64 1363 aa15.79■□□□□ 0.12
CDCA3-206ENST00000536241 CPSF1Q10570 1443 aaKnown RBP15.78■□□□□ 0.12
CDCA3-206ENST00000536241 FOXO3O43524 673 aa15.78■□□□□ 0.12
CDCA3-206ENST00000536241 KTN1Q86UP2 1357 aaKnown RBP15.77■□□□□ 0.12
CDCA3-206ENST00000536241 PSME1Q06323 249 aa15.76■□□□□ 0.11
CDCA3-206ENST00000536241 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
CDCA3-206ENST00000536241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDCA3-206ENST00000536241 CERKQ8TCT0 537 aa15.76■□□□□ 0.11
CDCA3-206ENST00000536241 TOPAZ1Q8N9V7 1692 aa15.75■□□□□ 0.11
CDCA3-206ENST00000536241 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
CDCA3-206ENST00000536241 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
CDCA3-206ENST00000536241 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
CDCA3-206ENST00000536241 NSD3Q9BZ95 1437 aa15.75■□□□□ 0.11
CDCA3-206ENST00000536241 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
CDCA3-206ENST00000536241 ANP32CO43423 234 aa15.74■□□□□ 0.11
CDCA3-206ENST00000536241 DDX17Q92841 729 aaKnown RBP15.74■□□□□ 0.11
CDCA3-206ENST00000536241 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
CDCA3-206ENST00000536241 MIER1Q8N108 512 aa15.73■□□□□ 0.11
CDCA3-206ENST00000536241 FYB1O15117 783 aa15.72■□□□□ 0.11
CDCA3-206ENST00000536241 TOM1O60784 492 aa15.72■□□□□ 0.11
CDCA3-206ENST00000536241 KRT28Q7Z3Y7 464 aa15.72■□□□□ 0.11
CDCA3-206ENST00000536241 CGNL1Q0VF96 1302 aa15.72■□□□□ 0.11
CDCA3-206ENST00000536241 TTC21BQ7Z4L5 1316 aa15.72■□□□□ 0.11
CDCA3-206ENST00000536241 USP6P35125 1406 aa15.72■□□□□ 0.11
CDCA3-206ENST00000536241 UBAP1LF5GYI3 381 aa15.71■□□□□ 0.1
CDCA3-206ENST00000536241 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.1
CDCA3-206ENST00000536241 GGNBP2Q9H3C7 697 aa15.71■□□□□ 0.1
CDCA3-206ENST00000536241 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.1
CDCA3-206ENST00000536241 EDC4Q6P2E9 1401 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms