RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
CCND1-202ENST00000535993 ABCC11Q96J66 1382 aa18.01■□□□□ 0.47
CCND1-202ENST00000535993 PIK3C2GO75747 1445 aa18■□□□□ 0.47
CCND1-202ENST00000535993 TMEM132EQ6IEE7 984 aa18■□□□□ 0.47
CCND1-202ENST00000535993 WAPLQ7Z5K2 1190 aa18■□□□□ 0.47
CCND1-202ENST00000535993 NPHP3Q7Z494 1330 aa17.98■□□□□ 0.47
CCND1-202ENST00000535993 LAMC1P11047 1609 aa17.98■□□□□ 0.47
CCND1-202ENST00000535993 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
CCND1-202ENST00000535993 ADAMTS2O95450 1211 aa17.98■□□□□ 0.47
CCND1-202ENST00000535993 C14orf93Q9H972 538 aaKnown RBP17.98■□□□□ 0.47
CCND1-202ENST00000535993 CDC42BPGQ6DT37 1551 aa17.98■□□□□ 0.47
CCND1-202ENST00000535993 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
CCND1-202ENST00000535993 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
CCND1-202ENST00000535993 NGLY1Q96IV0 654 aa17.97■□□□□ 0.47
CCND1-202ENST00000535993 YTHDC2Q9H6S0 1430 aaKnown RBP17.97■□□□□ 0.47
CCND1-202ENST00000535993 QTRT2Q9H974 415 aaKnown RBP17.96■□□□□ 0.47
CCND1-202ENST00000535993 CDK12Q9NYV4 1490 aaPredicted RBP17.95■□□□□ 0.46
CCND1-202ENST00000535993 DHX57Q6P158 1386 aaKnown RBP17.94■□□□□ 0.46
CCND1-202ENST00000535993 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
CCND1-202ENST00000535993 FOXO3O43524 673 aa17.94■□□□□ 0.46
CCND1-202ENST00000535993 RBM6P78332 1123 aaKnown RBP17.94■□□□□ 0.46
CCND1-202ENST00000535993 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
CCND1-202ENST00000535993 MYOM2P54296 1465 aa17.93■□□□□ 0.46
CCND1-202ENST00000535993 CFAP70Q5T0N1 1121 aa17.92■□□□□ 0.46
CCND1-202ENST00000535993 UPF1Q92900 1129 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCND1-202ENST00000535993 NRXN1Q9ULB1 1477 aa17.92■□□□□ 0.46
CCND1-202ENST00000535993 KNDC1Q76NI1 1749 aa17.91■□□□□ 0.46
CCND1-202ENST00000535993 HRCP23327 699 aa17.9■□□□□ 0.46
CCND1-202ENST00000535993 XPCQ01831 940 aaPredicted RBP17.9■□□□□ 0.46
CCND1-202ENST00000535993 USP21Q9UK80 565 aa17.9■□□□□ 0.46
CCND1-202ENST00000535993 PXDNQ92626 1479 aa17.89■□□□□ 0.45
CCND1-202ENST00000535993 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.45
CCND1-202ENST00000535993 TRPC5Q9UL62 973 aaPredicted RBP17.89■□□□□ 0.45
CCND1-202ENST00000535993 PRAM1Q96QH2 718 aa17.87■□□□□ 0.45
CCND1-202ENST00000535993 POGKQ9P215 609 aa17.87■□□□□ 0.45
CCND1-202ENST00000535993 COL22A1Q8NFW1 1626 aaPredicted RBP17.87■□□□□ 0.45
CCND1-202ENST00000535993 STAC3Q96MF2 364 aa17.86■□□□□ 0.45
CCND1-202ENST00000535993 RGS12O14924 1447 aa17.85■□□□□ 0.45
CCND1-202ENST00000535993 SAFB2Q14151 953 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCND1-202ENST00000535993 PHF8Q9UPP1 1060 aa17.85■□□□□ 0.45
CCND1-202ENST00000535993 SPATA31A3Q5VYP0 1347 aa17.84■□□□□ 0.45
CCND1-202ENST00000535993 PSME1Q06323 249 aa17.84■□□□□ 0.45
CCND1-202ENST00000535993 KRT28Q7Z3Y7 464 aa17.84■□□□□ 0.45
CCND1-202ENST00000535993 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
CCND1-202ENST00000535993 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
CCND1-202ENST00000535993 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
CCND1-202ENST00000535993 KIF1AQ12756 1690 aa17.82■□□□□ 0.44
CCND1-202ENST00000535993 DLC1Q96QB1 1528 aa17.82■□□□□ 0.44
CCND1-202ENST00000535993 TRAK1Q9UPV9 953 aa17.81■□□□□ 0.44
CCND1-202ENST00000535993 ATRNO75882 1429 aa17.81■□□□□ 0.44
CCND1-202ENST00000535993 BCL9LQ86UU0 1499 aa17.78■□□□□ 0.44
CCND1-202ENST00000535993 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
CCND1-202ENST00000535993 ANKARQ7Z5J8 1434 aa17.78■□□□□ 0.44
CCND1-202ENST00000535993 ADGRB1O14514 1584 aa17.78■□□□□ 0.44
CCND1-202ENST00000535993 SBNO1A3KN83 1393 aa17.78■□□□□ 0.44
CCND1-202ENST00000535993 ATAD2Q6PL18 1390 aa17.78■□□□□ 0.44
CCND1-202ENST00000535993 TNS3Q68CZ2 1445 aa17.77■□□□□ 0.44
CCND1-202ENST00000535993 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.43
CCND1-202ENST00000535993 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
CCND1-202ENST00000535993 UNC5CLQ8IV45 518 aa17.76■□□□□ 0.43
CCND1-202ENST00000535993 GJD4Q96KN9 370 aaPredicted RBP17.76■□□□□ 0.43
CCND1-202ENST00000535993 HIRIP3Q9BW71 556 aaPredicted RBP17.76■□□□□ 0.43
CCND1-202ENST00000535993 ARHGEF10O15013 1369 aa17.76■□□□□ 0.43
CCND1-202ENST00000535993 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
CCND1-202ENST00000535993 PMFBP1Q8TBY8 1022 aa17.75■□□□□ 0.43
CCND1-202ENST00000535993 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
CCND1-202ENST00000535993 ADGRB2O60241 1585 aa17.73■□□□□ 0.43
CCND1-202ENST00000535993 MARF1Q9Y4F3 1742 aaKnown RBP17.72■□□□□ 0.43
CCND1-202ENST00000535993 GPRASP1Q5JY77 1395 aa17.72■□□□□ 0.43
CCND1-202ENST00000535993 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
CCND1-202ENST00000535993 SLIT2O94813 1529 aa17.72■□□□□ 0.43
CCND1-202ENST00000535993 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
CCND1-202ENST00000535993 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
CCND1-202ENST00000535993 USP32Q8NFA0 1604 aa17.7■□□□□ 0.42
CCND1-202ENST00000535993 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
CCND1-202ENST00000535993 PRR36Q9H6K5 1346 aa17.69■□□□□ 0.42
CCND1-202ENST00000535993 TULP4Q9NRJ4 1543 aa17.68■□□□□ 0.42
CCND1-202ENST00000535993 CCDC125Q86Z20 511 aa17.68■□□□□ 0.42
CCND1-202ENST00000535993 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
CCND1-202ENST00000535993 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.67■□□□□ 0.42
CCND1-202ENST00000535993 VPS72Q15906 364 aa17.67■□□□□ 0.42
CCND1-202ENST00000535993 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
CCND1-202ENST00000535993 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
CCND1-202ENST00000535993 CCDC9Q9Y3X0 531 aaKnown RBP17.65■□□□□ 0.42
CCND1-202ENST00000535993 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
CCND1-202ENST00000535993 CDK19Q9BWU1 502 aa17.63■□□□□ 0.41
CCND1-202ENST00000535993 GLI3P10071 1580 aa17.62■□□□□ 0.41
CCND1-202ENST00000535993 KIAA1210Q9ULL0 1709 aa17.62■□□□□ 0.41
CCND1-202ENST00000535993 SEPT12Q8IYM1 358 aa17.62■□□□□ 0.41
CCND1-202ENST00000535993 ONECUT3O60422 494 aaPredicted RBP17.61■□□□□ 0.41
CCND1-202ENST00000535993 BTG4Q9NY30 223 aa17.6■□□□□ 0.41
CCND1-202ENST00000535993 CCDC61Q9Y6R9 512 aa17.6■□□□□ 0.41
CCND1-202ENST00000535993 ARHGEF28Q8N1W1 1705 aaKnown RBP17.6■□□□□ 0.41
CCND1-202ENST00000535993 TRPM3Q9HCF6 1732 aaPredicted RBP17.6■□□□□ 0.41
CCND1-202ENST00000535993 NWD2Q9ULI1 1742 aa17.6■□□□□ 0.41
CCND1-202ENST00000535993 ATP7BP35670 1465 aa17.59■□□□□ 0.41
CCND1-202ENST00000535993 NBPF1Q3BBV0 1214 aa17.59■□□□□ 0.41
CCND1-202ENST00000535993 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
CCND1-202ENST00000535993 ABCA3Q99758 1704 aa17.58■□□□□ 0.41
CCND1-202ENST00000535993 EP400Q96L91 3159 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms