RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.71■□□□□ 0.43
LPCAT3-203ENST00000535479 SSH1Q8WYL5 1049 aa17.71■□□□□ 0.43
LPCAT3-203ENST00000535479 EIF2AK4Q9P2K8 1649 aaKnown RBP17.7■□□□□ 0.42
LPCAT3-203ENST00000535479 BECN1Q14457 450 aa17.7■□□□□ 0.42
LPCAT3-203ENST00000535479 UPF2Q9HAU5 1272 aaKnown RBP17.7■□□□□ 0.42
LPCAT3-203ENST00000535479 NOB1Q9ULX3 412 aaKnown RBP17.7■□□□□ 0.42
LPCAT3-203ENST00000535479 TRIM27P14373 513 aa17.69■□□□□ 0.42
LPCAT3-203ENST00000535479 MYOM1P52179 1685 aa17.69■□□□□ 0.42
LPCAT3-203ENST00000535479 HMOX1P09601 288 aa17.68■□□□□ 0.42
LPCAT3-203ENST00000535479 APBB1O00213 710 aa17.68■□□□□ 0.42
LPCAT3-203ENST00000535479 TMEM57Q8N5G2 664 aa17.68■□□□□ 0.42
LPCAT3-203ENST00000535479 KANK1Q14678 1352 aa17.68■□□□□ 0.42
LPCAT3-203ENST00000535479 CHD1O14646 1710 aa17.68■□□□□ 0.42
LPCAT3-203ENST00000535479 DZIP1LQ8IYY4 767 aaKnown RBP17.67■□□□□ 0.42
LPCAT3-203ENST00000535479 TBC1D32Q96NH3 1257 aa17.67■□□□□ 0.42
LPCAT3-203ENST00000535479 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
LPCAT3-203ENST00000535479 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
LPCAT3-203ENST00000535479 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
LPCAT3-203ENST00000535479 MVPQ14764 893 aaKnown RBP17.65■□□□□ 0.42
LPCAT3-203ENST00000535479 C22orf23Q9BZE7 217 aa17.65■□□□□ 0.42
LPCAT3-203ENST00000535479 ANTXR1Q9H6X2 564 aa17.65■□□□□ 0.42
LPCAT3-203ENST00000535479 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
LPCAT3-203ENST00000535479 IQGAP1P46940 1657 aa17.65■□□□□ 0.42
LPCAT3-203ENST00000535479 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.42
LPCAT3-203ENST00000535479 SYNMO15061 1565 aa17.64■□□□□ 0.41
LPCAT3-203ENST00000535479 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.41
LPCAT3-203ENST00000535479 PMFBP1Q8TBY8 1022 aa17.64■□□□□ 0.41
LPCAT3-203ENST00000535479 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
LPCAT3-203ENST00000535479 RIPK4P57078 832 aa17.63■□□□□ 0.41
LPCAT3-203ENST00000535479 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
LPCAT3-203ENST00000535479 XRCC6P12956 609 aaKnown RBP eCLIP17.62■□□□□ 0.41
LPCAT3-203ENST00000535479 PTPRTO14522 1441 aa17.62■□□□□ 0.41
LPCAT3-203ENST00000535479 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
LPCAT3-203ENST00000535479 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
LPCAT3-203ENST00000535479 KDM5AP29375 1690 aaKnown RBP17.61■□□□□ 0.41
LPCAT3-203ENST00000535479 SOX12O15370 315 aa17.6■□□□□ 0.41
LPCAT3-203ENST00000535479 CD2BP2O95400 341 aaKnown RBP17.6■□□□□ 0.41
LPCAT3-203ENST00000535479 TRIM35Q9UPQ4 493 aa17.6■□□□□ 0.41
LPCAT3-203ENST00000535479 ABCA6Q8N139 1617 aa17.6■□□□□ 0.41
LPCAT3-203ENST00000535479 ABCC1P33527 1531 aa17.6■□□□□ 0.41
LPCAT3-203ENST00000535479 CEP152O94986 1710 aa17.59■□□□□ 0.41
LPCAT3-203ENST00000535479 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
LPCAT3-203ENST00000535479 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
LPCAT3-203ENST00000535479 PLXNC1O60486 1568 aa17.59■□□□□ 0.41
LPCAT3-203ENST00000535479 TRPM2O94759 1503 aa17.59■□□□□ 0.41
LPCAT3-203ENST00000535479 FANCAO15360 1455 aa17.58■□□□□ 0.41
LPCAT3-203ENST00000535479 DCTN1Q14203 1278 aa17.58■□□□□ 0.41
LPCAT3-203ENST00000535479 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.41
LPCAT3-203ENST00000535479 LAMC1P11047 1609 aa17.58■□□□□ 0.41
LPCAT3-203ENST00000535479 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
LPCAT3-203ENST00000535479 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.4
LPCAT3-203ENST00000535479 TSPYL6Q8N831 410 aa17.58■□□□□ 0.4
LPCAT3-203ENST00000535479 CHAMP1Q96JM3 812 aa17.58■□□□□ 0.4
LPCAT3-203ENST00000535479 POLR3AO14802 1390 aaPredicted RBP17.58■□□□□ 0.4
LPCAT3-203ENST00000535479 ZCCHC11Q5TAX3 1644 aaKnown RBP17.57■□□□□ 0.4
LPCAT3-203ENST00000535479 NUTM2FA1L443 756 aa17.57■□□□□ 0.4
LPCAT3-203ENST00000535479 MCM4P33991 863 aa17.57■□□□□ 0.4
LPCAT3-203ENST00000535479 NCKAP5LQ9HCH0 1330 aa17.57■□□□□ 0.4
LPCAT3-203ENST00000535479 SPHKAPQ2M3C7 1700 aa17.57■□□□□ 0.4
LPCAT3-203ENST00000535479 NAP1L5Q96NT1 182 aaPredicted RBP17.57■□□□□ 0.4
LPCAT3-203ENST00000535479 ZBTB7CA1YPR0 619 aa17.56■□□□□ 0.4
LPCAT3-203ENST00000535479 ZFYVE16Q7Z3T8 1539 aa17.56■□□□□ 0.4
LPCAT3-203ENST00000535479 TRAK2O60296 914 aa17.56■□□□□ 0.4
LPCAT3-203ENST00000535479 ADGRL1O94910 1474 aa17.55■□□□□ 0.4
LPCAT3-203ENST00000535479 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
LPCAT3-203ENST00000535479 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
LPCAT3-203ENST00000535479 PRAM1Q96QH2 718 aa17.55■□□□□ 0.4
LPCAT3-203ENST00000535479 PHACTR3Q96KR7 559 aa17.55■□□□□ 0.4
LPCAT3-203ENST00000535479 GOLGA6L3A6NEY3 463 aa17.54■□□□□ 0.4
LPCAT3-203ENST00000535479 FOXD4L5Q5VV16 416 aaPredicted RBP17.54■□□□□ 0.4
LPCAT3-203ENST00000535479 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
LPCAT3-203ENST00000535479 FOXD4L4Q8WXT5 416 aaPredicted RBP17.54■□□□□ 0.4
LPCAT3-203ENST00000535479 C14orf93Q9H972 538 aaKnown RBP17.54■□□□□ 0.4
LPCAT3-203ENST00000535479 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
LPCAT3-203ENST00000535479 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
LPCAT3-203ENST00000535479 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
LPCAT3-203ENST00000535479 MROH2AA6NES4 1674 aa17.53■□□□□ 0.4
LPCAT3-203ENST00000535479 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
LPCAT3-203ENST00000535479 CABP1Q9NZU7 370 aa17.53■□□□□ 0.4
LPCAT3-203ENST00000535479 CD109Q6YHK3 1445 aa17.53■□□□□ 0.4
LPCAT3-203ENST00000535479 FBXO31Q5XUX0 539 aaPredicted RBP17.52■□□□□ 0.4
LPCAT3-203ENST00000535479 HSCBQ8IWL3 235 aa17.52■□□□□ 0.4
LPCAT3-203ENST00000535479 FYB1O15117 783 aa17.51■□□□□ 0.39
LPCAT3-203ENST00000535479 HSP90AB1P08238 724 aaKnown RBP17.51■□□□□ 0.39
LPCAT3-203ENST00000535479 A0A1W2PP64 1363 aa17.51■□□□□ 0.39
LPCAT3-203ENST00000535479 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
LPCAT3-203ENST00000535479 IDI1Q13907 227 aa17.51■□□□□ 0.39
LPCAT3-203ENST00000535479 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
LPCAT3-203ENST00000535479 ATP7AQ04656 1500 aa17.51■□□□□ 0.39
LPCAT3-203ENST00000535479 EVC2Q86UK5 1308 aa17.5■□□□□ 0.39
LPCAT3-203ENST00000535479 MLECQ14165 292 aa17.5■□□□□ 0.39
LPCAT3-203ENST00000535479 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
LPCAT3-203ENST00000535479 GAS2L3Q86XJ1 694 aa17.5■□□□□ 0.39
LPCAT3-203ENST00000535479 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
LPCAT3-203ENST00000535479 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
LPCAT3-203ENST00000535479 FAM43AQ8N2R8 423 aa17.49■□□□□ 0.39
LPCAT3-203ENST00000535479 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
LPCAT3-203ENST00000535479 MAP3K4Q9Y6R4 1608 aa17.49■□□□□ 0.39
LPCAT3-203ENST00000535479 CLASP1Q7Z460 1538 aa17.49■□□□□ 0.39
LPCAT3-203ENST00000535479 DTNBO60941 627 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms