RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-202ENST00000535202 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-202ENST00000535202 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
SFSWAP-202ENST00000535202 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-202ENST00000535202 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-202ENST00000535202 NRXN1Q9ULB1 1477 aa12.54□□□□□ -0.4
SFSWAP-202ENST00000535202 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-202ENST00000535202 ORAI2Q96SN7 254 aa12.54□□□□□ -0.4
SFSWAP-202ENST00000535202 ABCC11Q96J66 1382 aa12.54□□□□□ -0.4
SFSWAP-202ENST00000535202 PLEKHH1Q9ULM0 1364 aa12.54□□□□□ -0.4
SFSWAP-202ENST00000535202 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
SFSWAP-202ENST00000535202 C14orf93Q9H972 538 aaKnown RBP12.53□□□□□ -0.4
SFSWAP-202ENST00000535202 PNPLA6Q8IY17 1366 aa12.52□□□□□ -0.41
SFSWAP-202ENST00000535202 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
SFSWAP-202ENST00000535202 ESCO1Q5FWF5 840 aa12.51□□□□□ -0.41
SFSWAP-202ENST00000535202 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-202ENST00000535202 FMN2Q9NZ56 1722 aa12.51□□□□□ -0.41
SFSWAP-202ENST00000535202 ZNF772Q68DY9 489 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-202ENST00000535202 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
SFSWAP-202ENST00000535202 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-202ENST00000535202 DCAF11Q8TEB1 546 aa12.48□□□□□ -0.41
SFSWAP-202ENST00000535202 AFF2P51816 1311 aa12.47□□□□□ -0.41
SFSWAP-202ENST00000535202 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
SFSWAP-202ENST00000535202 SAFB2Q14151 953 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■■□□ 18.7
SFSWAP-202ENST00000535202 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
SFSWAP-202ENST00000535202 C8orf37Q96NL8 207 aa12.47□□□□□ -0.41
SFSWAP-202ENST00000535202 RGPD8O14715 1765 aaPredicted RBP12.47□□□□□ -0.41
SFSWAP-202ENST00000535202 KIF1AQ12756 1690 aa12.47□□□□□ -0.41
SFSWAP-202ENST00000535202 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
SFSWAP-202ENST00000535202 DLC1Q96QB1 1528 aa12.47□□□□□ -0.41
SFSWAP-202ENST00000535202 FOXO3O43524 673 aa12.46□□□□□ -0.41
SFSWAP-202ENST00000535202 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
SFSWAP-202ENST00000535202 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.41
SFSWAP-202ENST00000535202 PRAM1Q96QH2 718 aa12.46□□□□□ -0.41
SFSWAP-202ENST00000535202 POGKQ9P215 609 aa12.46□□□□□ -0.41
SFSWAP-202ENST00000535202 PXDNQ92626 1479 aa12.46□□□□□ -0.42
SFSWAP-202ENST00000535202 COL22A1Q8NFW1 1626 aaPredicted RBP12.45□□□□□ -0.42
SFSWAP-202ENST00000535202 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
SFSWAP-202ENST00000535202 RXRBP28702 533 aa12.43□□□□□ -0.42
SFSWAP-202ENST00000535202 ADGRB2O60241 1585 aa12.43□□□□□ -0.42
SFSWAP-202ENST00000535202 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
SFSWAP-202ENST00000535202 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
SFSWAP-202ENST00000535202 ARHGEF28Q8N1W1 1705 aaKnown RBP12.41□□□□□ -0.42
SFSWAP-202ENST00000535202 HIRIP3Q9BW71 556 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-202ENST00000535202 PHF8Q9UPP1 1060 aa12.41□□□□□ -0.42
SFSWAP-202ENST00000535202 MARF1Q9Y4F3 1742 aaKnown RBP12.41□□□□□ -0.42
SFSWAP-202ENST00000535202 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
SFSWAP-202ENST00000535202 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-202ENST00000535202 ANKARQ7Z5J8 1434 aa12.39□□□□□ -0.43
SFSWAP-202ENST00000535202 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
SFSWAP-202ENST00000535202 QTRT2Q9H974 415 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-202ENST00000535202 SPATA31A3Q5VYP0 1347 aa12.38□□□□□ -0.43
SFSWAP-202ENST00000535202 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
SFSWAP-202ENST00000535202 USP21Q9UK80 565 aa12.38□□□□□ -0.43
SFSWAP-202ENST00000535202 CDK12Q9NYV4 1490 aaPredicted RBP12.38□□□□□ -0.43
SFSWAP-202ENST00000535202 TNS3Q68CZ2 1445 aa12.37□□□□□ -0.43
SFSWAP-202ENST00000535202 TULP4Q9NRJ4 1543 aa12.37□□□□□ -0.43
SFSWAP-202ENST00000535202 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
SFSWAP-202ENST00000535202 PSME1Q06323 249 aa12.37□□□□□ -0.43
SFSWAP-202ENST00000535202 PMFBP1Q8TBY8 1022 aa12.37□□□□□ -0.43
SFSWAP-202ENST00000535202 EIF3AQ14152 1382 aaKnown RBP12.37□□□□□ -0.43
SFSWAP-202ENST00000535202 RGS12O14924 1447 aa12.37□□□□□ -0.43
SFSWAP-202ENST00000535202 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
SFSWAP-202ENST00000535202 WASLO00401 505 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-202ENST00000535202 HAP1P54257 671 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-202ENST00000535202 LMOD2Q6P5Q4 547 aa12.35□□□□□ -0.43
SFSWAP-202ENST00000535202 FNBP4Q8N3X1 1017 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-202ENST00000535202 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-202ENST00000535202 PRR36Q9H6K5 1346 aa12.35□□□□□ -0.43
SFSWAP-202ENST00000535202 ITSN1Q15811 1721 aa12.34□□□□□ -0.43
SFSWAP-202ENST00000535202 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
SFSWAP-202ENST00000535202 SBNO1A3KN83 1393 aa12.34□□□□□ -0.43
SFSWAP-202ENST00000535202 ATRNO75882 1429 aa12.34□□□□□ -0.43
SFSWAP-202ENST00000535202 TRPM3Q9HCF6 1732 aaPredicted RBP12.34□□□□□ -0.43
SFSWAP-202ENST00000535202 NBPF1Q3BBV0 1214 aa12.33□□□□□ -0.44
SFSWAP-202ENST00000535202 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
SFSWAP-202ENST00000535202 ARHGEF10O15013 1369 aa12.32□□□□□ -0.44
SFSWAP-202ENST00000535202 GPRASP1Q5JY77 1395 aa12.32□□□□□ -0.44
SFSWAP-202ENST00000535202 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-202ENST00000535202 CABLES1Q8TDN4 633 aa12.32□□□□□ -0.44
SFSWAP-202ENST00000535202 UPF1Q92900 1129 aaKnown RBP eCLIP12.32□□□□□ -0.44
SFSWAP-202ENST00000535202 SIN3AQ96ST3 1273 aa12.32□□□□□ -0.44
SFSWAP-202ENST00000535202 ATP7BP35670 1465 aa12.32□□□□□ -0.44
SFSWAP-202ENST00000535202 NEUROD1Q13562 356 aa12.31□□□□□ -0.44
SFSWAP-202ENST00000535202 NGDNQ8NEJ9 315 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-202ENST00000535202 PLCH1Q4KWH8 1693 aa12.31□□□□□ -0.44
SFSWAP-202ENST00000535202 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
SFSWAP-202ENST00000535202 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
SFSWAP-202ENST00000535202 SLIT2O94813 1529 aa12.3□□□□□ -0.44
SFSWAP-202ENST00000535202 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
SFSWAP-202ENST00000535202 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
SFSWAP-202ENST00000535202 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
SFSWAP-202ENST00000535202 CDK19Q9BWU1 502 aa12.29□□□□□ -0.44
SFSWAP-202ENST00000535202 TRPM1Q7Z4N2 1603 aa12.29□□□□□ -0.44
SFSWAP-202ENST00000535202 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
SFSWAP-202ENST00000535202 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
SFSWAP-202ENST00000535202 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
SFSWAP-202ENST00000535202 NWD2Q9ULI1 1742 aa12.28□□□□□ -0.44
SFSWAP-202ENST00000535202 CENPJQ9HC77 1338 aaPredicted RBP12.27□□□□□ -0.45
SFSWAP-202ENST00000535202 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms