RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
BEST1-208ENST00000534553 CARD14Q9BXL6 1004 aa17.95■□□□□ 0.46
BEST1-208ENST00000534553 NSD3Q9BZ95 1437 aa17.95■□□□□ 0.46
BEST1-208ENST00000534553 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
BEST1-208ENST00000534553 TECPR2O15040 1411 aa17.93■□□□□ 0.46
BEST1-208ENST00000534553 C3P01024 1663 aa17.93■□□□□ 0.46
BEST1-208ENST00000534553 KNDC1Q76NI1 1749 aa17.93■□□□□ 0.46
BEST1-208ENST00000534553 FAM135BQ49AJ0 1406 aa17.93■□□□□ 0.46
BEST1-208ENST00000534553 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
BEST1-208ENST00000534553 PDE3BQ13370 1112 aa17.92■□□□□ 0.46
BEST1-208ENST00000534553 ERICH6BQ5W0A0 696 aa17.92■□□□□ 0.46
BEST1-208ENST00000534553 SLC12A5Q9H2X9 1139 aa17.92■□□□□ 0.46
BEST1-208ENST00000534553 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
BEST1-208ENST00000534553 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
BEST1-208ENST00000534553 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
BEST1-208ENST00000534553 NUDCQ9Y266 331 aa17.91■□□□□ 0.46
BEST1-208ENST00000534553 SLIT1O75093 1534 aa17.9■□□□□ 0.46
BEST1-208ENST00000534553 FKBP8Q14318 412 aa17.9■□□□□ 0.46
BEST1-208ENST00000534553 TERF2IPQ9NYB0 399 aa17.89■□□□□ 0.45
BEST1-208ENST00000534553 CPS1P31327 1500 aa17.89■□□□□ 0.45
BEST1-208ENST00000534553 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
BEST1-208ENST00000534553 CABP2Q9NPB3 220 aa17.88■□□□□ 0.45
BEST1-208ENST00000534553 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
BEST1-208ENST00000534553 POLR3AO14802 1390 aaPredicted RBP17.87■□□□□ 0.45
BEST1-208ENST00000534553 SAFB2Q14151 953 aaKnown RBP eCLIP17.87■□□□□ 0.45
BEST1-208ENST00000534553 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
BEST1-208ENST00000534553 MED14O60244 1454 aa17.86■□□□□ 0.45
BEST1-208ENST00000534553 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
BEST1-208ENST00000534553 METP08581 1390 aa17.85■□□□□ 0.45
BEST1-208ENST00000534553 THEMISQ8N1K5 641 aaPredicted RBP17.85■□□□□ 0.45
BEST1-208ENST00000534553 ATP7BP35670 1465 aa17.85■□□□□ 0.45
BEST1-208ENST00000534553 CDK19Q9BWU1 502 aa17.84■□□□□ 0.45
BEST1-208ENST00000534553 A0A1W2PP64 1363 aa17.84■□□□□ 0.45
BEST1-208ENST00000534553 ADAMTS13Q76LX8 1427 aa17.84■□□□□ 0.45
BEST1-208ENST00000534553 DIP2AQ14689 1571 aa17.84■□□□□ 0.45
BEST1-208ENST00000534553 HDGFL2Q7Z4V5 671 aaPredicted RBP17.84■□□□□ 0.45
BEST1-208ENST00000534553 NGEFQ8N5V2 710 aa17.84■□□□□ 0.45
BEST1-208ENST00000534553 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
BEST1-208ENST00000534553 BCANQ96GW7 911 aa17.82■□□□□ 0.44
BEST1-208ENST00000534553 TXNDC2Q86VQ3 553 aa17.82■□□□□ 0.44
BEST1-208ENST00000534553 ADAMTS8Q9UP79 889 aa17.82■□□□□ 0.44
BEST1-208ENST00000534553 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
BEST1-208ENST00000534553 CD163L1Q9NR16 1453 aa17.8■□□□□ 0.44
BEST1-208ENST00000534553 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
BEST1-208ENST00000534553 CFAP53Q96M91 514 aa17.79■□□□□ 0.44
BEST1-208ENST00000534553 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
BEST1-208ENST00000534553 WAPLQ7Z5K2 1190 aa17.79■□□□□ 0.44
BEST1-208ENST00000534553 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
BEST1-208ENST00000534553 LTKP29376 864 aa17.78■□□□□ 0.44
BEST1-208ENST00000534553 TBX22Q9Y458 520 aa17.78■□□□□ 0.44
BEST1-208ENST00000534553 ANKRD26Q9UPS8 1709 aa17.77■□□□□ 0.44
BEST1-208ENST00000534553 CEP170BQ9Y4F5 1589 aaPredicted RBP17.77■□□□□ 0.44
BEST1-208ENST00000534553 RNF123Q5XPI4 1314 aa17.77■□□□□ 0.43
BEST1-208ENST00000534553 PTCH1Q13635 1447 aa17.75■□□□□ 0.43
BEST1-208ENST00000534553 CABP1Q9NZU7 370 aa17.75■□□□□ 0.43
BEST1-208ENST00000534553 PIK3R4Q99570 1358 aa17.74■□□□□ 0.43
BEST1-208ENST00000534553 ADAMTSL3P82987 1691 aa17.74■□□□□ 0.43
BEST1-208ENST00000534553 RIMS1Q86UR5 1692 aaKnown RBP17.74■□□□□ 0.43
BEST1-208ENST00000534553 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
BEST1-208ENST00000534553 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
BEST1-208ENST00000534553 ROBO2Q9HCK4 1378 aa17.72■□□□□ 0.43
BEST1-208ENST00000534553 CCDC61Q9Y6R9 512 aa17.72■□□□□ 0.43
BEST1-208ENST00000534553 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
BEST1-208ENST00000534553 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
BEST1-208ENST00000534553 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.43
BEST1-208ENST00000534553 FYB1O15117 783 aa17.71■□□□□ 0.43
BEST1-208ENST00000534553 KIF20BQ96Q89 1820 aa17.71■□□□□ 0.43
BEST1-208ENST00000534553 MTHFSP49914 203 aa17.7■□□□□ 0.42
BEST1-208ENST00000534553 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
BEST1-208ENST00000534553 SHPRHQ149N8 1683 aa17.7■□□□□ 0.42
BEST1-208ENST00000534553 NUDT16Q96DE0 195 aaKnown RBP17.7■□□□□ 0.42
BEST1-208ENST00000534553 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
BEST1-208ENST00000534553 ZNF521Q96K83 1311 aa17.69■□□□□ 0.42
BEST1-208ENST00000534553 PPP4R2Q9NY27 417 aa17.68■□□□□ 0.42
BEST1-208ENST00000534553 TNNT2P45379 298 aaPredicted RBP17.68■□□□□ 0.42
BEST1-208ENST00000534553 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
BEST1-208ENST00000534553 PTPRUQ92729 1446 aa17.67■□□□□ 0.42
BEST1-208ENST00000534553 GOLGA2Q08379 1002 aa17.67■□□□□ 0.42
BEST1-208ENST00000534553 SLC26A8Q96RN1 970 aa17.67■□□□□ 0.42
BEST1-208ENST00000534553 GGNBP2Q9H3C7 697 aa17.67■□□□□ 0.42
BEST1-208ENST00000534553 RCAN3Q9UKA8 241 aa17.67■□□□□ 0.42
BEST1-208ENST00000534553 AMOTL2Q9Y2J4 779 aa17.66■□□□□ 0.42
BEST1-208ENST00000534553 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
BEST1-208ENST00000534553 XRN1Q8IZH2 1706 aaKnown RBP17.66■□□□□ 0.42
BEST1-208ENST00000534553 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
BEST1-208ENST00000534553 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
BEST1-208ENST00000534553 SETD1BQ9UPS6 1966 aaKnown RBP17.65■□□□□ 0.42
BEST1-208ENST00000534553 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.65■□□□□ 0.42
BEST1-208ENST00000534553 ANKLE2Q86XL3 938 aa17.65■□□□□ 0.42
BEST1-208ENST00000534553 TOPAZ1Q8N9V7 1692 aa17.64■□□□□ 0.41
BEST1-208ENST00000534553 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
BEST1-208ENST00000534553 PNPLA6Q8IY17 1366 aa17.63■□□□□ 0.41
BEST1-208ENST00000534553 AKAP12Q02952 1782 aa17.63■□□□□ 0.41
BEST1-208ENST00000534553 PLEKHG3A1L390 1219 aa17.63■□□□□ 0.41
BEST1-208ENST00000534553 APAF1O14727 1248 aa17.63■□□□□ 0.41
BEST1-208ENST00000534553 AATKQ6ZMQ8 1374 aa17.62■□□□□ 0.41
BEST1-208ENST00000534553 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
BEST1-208ENST00000534553 CCDC146Q8IYE0 955 aa17.62■□□□□ 0.41
BEST1-208ENST00000534553 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
BEST1-208ENST00000534553 PNNQ9H307 717 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms