RNA–Protein interactions for RNA: ENST00000533511.6

NUCB2-215, Transcript of nucleobindin 2, humanhuman

TSL 3

Gene NUCB2, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-215ENST00000533511 SOS2Q07890 1332 aaPredicted RBP23.42■■□□□ 1.34
NUCB2-215ENST00000533511 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
NUCB2-215ENST00000533511 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
NUCB2-215ENST00000533511 RBM6P78332 1123 aaKnown RBP23.39■■□□□ 1.33
NUCB2-215ENST00000533511 TMEM132EQ6IEE7 984 aa23.39■■□□□ 1.33
NUCB2-215ENST00000533511 SPATA31E1Q6ZUB1 1445 aa23.38■■□□□ 1.33
NUCB2-215ENST00000533511 CDK12Q9NYV4 1490 aaPredicted RBP23.37■■□□□ 1.33
NUCB2-215ENST00000533511 NUTM2FA1L443 756 aa23.37■■□□□ 1.33
NUCB2-215ENST00000533511 NPHP3Q7Z494 1330 aa23.36■■□□□ 1.33
NUCB2-215ENST00000533511 ACIN1Q9UKV3 1341 aaKnown RBP23.35■■□□□ 1.33
NUCB2-215ENST00000533511 FOXO3O43524 673 aa23.35■■□□□ 1.33
NUCB2-215ENST00000533511 LRPPRCP42704 1394 aaKnown RBP23.35■■□□□ 1.33
NUCB2-215ENST00000533511 USP21Q9UK80 565 aa23.34■■□□□ 1.33
NUCB2-215ENST00000533511 LAMC1P11047 1609 aa23.33■■□□□ 1.33
NUCB2-215ENST00000533511 ABCC11Q96J66 1382 aa23.33■■□□□ 1.33
NUCB2-215ENST00000533511 XPCQ01831 940 aaPredicted RBP23.33■■□□□ 1.33
NUCB2-215ENST00000533511 CDC42BPGQ6DT37 1551 aa23.31■■□□□ 1.32
NUCB2-215ENST00000533511 TECPR2O15040 1411 aa23.31■■□□□ 1.32
NUCB2-215ENST00000533511 PIK3C2GO75747 1445 aa23.3■■□□□ 1.32
NUCB2-215ENST00000533511 PLEKHH1Q9ULM0 1364 aa23.29■■□□□ 1.32
NUCB2-215ENST00000533511 RGS12O14924 1447 aa23.29■■□□□ 1.32
NUCB2-215ENST00000533511 TRPC5Q9UL62 973 aaPredicted RBP23.29■■□□□ 1.32
NUCB2-215ENST00000533511 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
NUCB2-215ENST00000533511 FNBP4Q8N3X1 1017 aaPredicted RBP23.28■■□□□ 1.32
NUCB2-215ENST00000533511 C14orf93Q9H972 538 aaKnown RBP23.27■■□□□ 1.32
NUCB2-215ENST00000533511 PXDNQ92626 1479 aa23.25■■□□□ 1.31
NUCB2-215ENST00000533511 CFAP70Q5T0N1 1121 aa23.25■■□□□ 1.31
NUCB2-215ENST00000533511 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
NUCB2-215ENST00000533511 IFT172Q9UG01 1749 aa23.25■■□□□ 1.31
NUCB2-215ENST00000533511 DHX57Q6P158 1386 aaKnown RBP23.24■■□□□ 1.31
NUCB2-215ENST00000533511 MYOM2P54296 1465 aa23.22■■□□□ 1.31
NUCB2-215ENST00000533511 COL22A1Q8NFW1 1626 aaPredicted RBP23.22■■□□□ 1.31
NUCB2-215ENST00000533511 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
NUCB2-215ENST00000533511 KRT28Q7Z3Y7 464 aa23.21■■□□□ 1.31
NUCB2-215ENST00000533511 RAB3GAP2Q9H2M9 1393 aa23.2■■□□□ 1.3
NUCB2-215ENST00000533511 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
NUCB2-215ENST00000533511 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
NUCB2-215ENST00000533511 POGKQ9P215 609 aa23.19■■□□□ 1.3
NUCB2-215ENST00000533511 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
NUCB2-215ENST00000533511 ATAD2Q6PL18 1390 aa23.18■■□□□ 1.3
NUCB2-215ENST00000533511 PSME1Q06323 249 aa23.18■■□□□ 1.3
NUCB2-215ENST00000533511 PHF8Q9UPP1 1060 aa23.18■■□□□ 1.3
NUCB2-215ENST00000533511 ATRNO75882 1429 aa23.17■■□□□ 1.3
NUCB2-215ENST00000533511 HAP1P54257 671 aaPredicted RBP23.17■■□□□ 1.3
NUCB2-215ENST00000533511 NRXN1Q9ULB1 1477 aa23.16■■□□□ 1.3
NUCB2-215ENST00000533511 PLEKHG5O94827 1062 aa23.15■■□□□ 1.3
NUCB2-215ENST00000533511 BCL9LQ86UU0 1499 aa23.15■■□□□ 1.3
NUCB2-215ENST00000533511 FMN2Q9NZ56 1722 aa23.14■■□□□ 1.3
NUCB2-215ENST00000533511 GJD4Q96KN9 370 aaPredicted RBP23.14■■□□□ 1.29
NUCB2-215ENST00000533511 KDM2AQ9Y2K7 1162 aa23.14■■□□□ 1.29
NUCB2-215ENST00000533511 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
NUCB2-215ENST00000533511 KIF1AQ12756 1690 aa23.12■■□□□ 1.29
NUCB2-215ENST00000533511 UNC5CLQ8IV45 518 aa23.11■■□□□ 1.29
NUCB2-215ENST00000533511 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
NUCB2-215ENST00000533511 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
NUCB2-215ENST00000533511 PMFBP1Q8TBY8 1022 aa23.1■■□□□ 1.29
NUCB2-215ENST00000533511 CABLES1Q8TDN4 633 aa23.1■■□□□ 1.29
NUCB2-215ENST00000533511 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.29
NUCB2-215ENST00000533511 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.28
NUCB2-215ENST00000533511 MINK1Q8N4C8 1332 aaPredicted RBP23.06■■□□□ 1.28
NUCB2-215ENST00000533511 MARF1Q9Y4F3 1742 aaKnown RBP23.05■■□□□ 1.28
NUCB2-215ENST00000533511 SBNO1A3KN83 1393 aa23.04■■□□□ 1.28
NUCB2-215ENST00000533511 SLIT2O94813 1529 aa23.04■■□□□ 1.28
NUCB2-215ENST00000533511 DLC1Q96QB1 1528 aa23.04■■□□□ 1.28
NUCB2-215ENST00000533511 CCDC125Q86Z20 511 aa23.04■■□□□ 1.28
NUCB2-215ENST00000533511 ARHGEF10O15013 1369 aa23.03■■□□□ 1.28
NUCB2-215ENST00000533511 ANKARQ7Z5J8 1434 aa23.03■■□□□ 1.28
NUCB2-215ENST00000533511 STAC3Q96MF2 364 aa23.03■■□□□ 1.28
NUCB2-215ENST00000533511 CCDC9Q9Y3X0 531 aaKnown RBP23.03■■□□□ 1.28
NUCB2-215ENST00000533511 RALGAPBQ86X10 1494 aa23.02■■□□□ 1.28
NUCB2-215ENST00000533511 HRCP23327 699 aa23.01■■□□□ 1.27
NUCB2-215ENST00000533511 RGPD8O14715 1765 aaPredicted RBP23.01■■□□□ 1.27
NUCB2-215ENST00000533511 ADGRB1O14514 1584 aa23.01■■□□□ 1.27
NUCB2-215ENST00000533511 USP32Q8NFA0 1604 aa23■■□□□ 1.27
NUCB2-215ENST00000533511 EIF3AQ14152 1382 aaKnown RBP23■■□□□ 1.27
NUCB2-215ENST00000533511 GPRASP1Q5JY77 1395 aa23■■□□□ 1.27
NUCB2-215ENST00000533511 WASLO00401 505 aaPredicted RBP22.99■■□□□ 1.27
NUCB2-215ENST00000533511 VPS72Q15906 364 aa22.99■■□□□ 1.27
NUCB2-215ENST00000533511 ZRANB1Q9UGI0 708 aa22.99■■□□□ 1.27
NUCB2-215ENST00000533511 EP400Q96L91 3159 aa22.99■■□□□ 1.27
NUCB2-215ENST00000533511 FAM83GA6ND36 823 aa22.97■■□□□ 1.27
NUCB2-215ENST00000533511 SEPT12Q8IYM1 358 aa22.97■■□□□ 1.27
NUCB2-215ENST00000533511 NGDNQ8NEJ9 315 aaKnown RBP22.97■■□□□ 1.27
NUCB2-215ENST00000533511 PAK3O75914 559 aaPredicted RBP22.96■■□□□ 1.27
NUCB2-215ENST00000533511 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.96■■□□□ 1.27
NUCB2-215ENST00000533511 ADGRB2O60241 1585 aa22.95■■□□□ 1.26
NUCB2-215ENST00000533511 GLI3P10071 1580 aa22.95■■□□□ 1.26
NUCB2-215ENST00000533511 PRR36Q9H6K5 1346 aa22.95■■□□□ 1.26
NUCB2-215ENST00000533511 SRCAPQ6ZRS2 3230 aa22.93■■□□□ 1.26
NUCB2-215ENST00000533511 A0A0G2JS52 829 aa22.93■■□□□ 1.26
NUCB2-215ENST00000533511 MYT1Q01538 1121 aa22.93■■□□□ 1.26
NUCB2-215ENST00000533511 SF3B2Q13435 895 aaKnown RBP22.92■■□□□ 1.26
NUCB2-215ENST00000533511 BTG4Q9NY30 223 aa22.92■■□□□ 1.26
NUCB2-215ENST00000533511 ONECUT3O60422 494 aaPredicted RBP22.91■■□□□ 1.26
NUCB2-215ENST00000533511 TULP4Q9NRJ4 1543 aa22.91■■□□□ 1.26
NUCB2-215ENST00000533511 BLMP54132 1417 aaPredicted RBP22.9■■□□□ 1.26
NUCB2-215ENST00000533511 KRT27Q7Z3Y8 459 aa22.89■■□□□ 1.25
NUCB2-215ENST00000533511 NUDT16Q96DE0 195 aaKnown RBP22.89■■□□□ 1.25
NUCB2-215ENST00000533511 FAM98CQ17RN3 349 aaKnown RBP22.87■■□□□ 1.25
NUCB2-215ENST00000533511 CDK19Q9BWU1 502 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms