RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 POLR1AO95602 1720 aaPredicted RBP16.92■□□□□ 0.3
TGFBR3-211ENST00000533370 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
TGFBR3-211ENST00000533370 ANP32CO43423 234 aa16.91■□□□□ 0.3
TGFBR3-211ENST00000533370 EVC2Q86UK5 1308 aa16.91■□□□□ 0.3
TGFBR3-211ENST00000533370 PIK3R4Q99570 1358 aa16.89■□□□□ 0.3
TGFBR3-211ENST00000533370 TECPR2O15040 1411 aa16.89■□□□□ 0.29
TGFBR3-211ENST00000533370 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
TGFBR3-211ENST00000533370 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
TGFBR3-211ENST00000533370 SETD1AO15047 1707 aaKnown RBP16.89■□□□□ 0.29
TGFBR3-211ENST00000533370 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
TGFBR3-211ENST00000533370 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
TGFBR3-211ENST00000533370 AMOTL2Q9Y2J4 779 aa16.88■□□□□ 0.29
TGFBR3-211ENST00000533370 DIP2AQ14689 1571 aa16.88■□□□□ 0.29
TGFBR3-211ENST00000533370 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
TGFBR3-211ENST00000533370 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
TGFBR3-211ENST00000533370 ARHGEF28Q8N1W1 1705 aaKnown RBP16.85■□□□□ 0.29
TGFBR3-211ENST00000533370 PANK3Q9H999 370 aa16.85■□□□□ 0.29
TGFBR3-211ENST00000533370 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
TGFBR3-211ENST00000533370 NPHP4O75161 1426 aaPredicted RBP16.85■□□□□ 0.29
TGFBR3-211ENST00000533370 PTPRUQ92729 1446 aa16.84■□□□□ 0.29
TGFBR3-211ENST00000533370 CDK19Q9BWU1 502 aa16.83■□□□□ 0.28
TGFBR3-211ENST00000533370 QRICH2Q9H0J4 1663 aa16.83■□□□□ 0.28
TGFBR3-211ENST00000533370 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
TGFBR3-211ENST00000533370 PLEKHH1Q9ULM0 1364 aa16.82■□□□□ 0.28
TGFBR3-211ENST00000533370 PER1O15534 1290 aaPredicted RBP16.82■□□□□ 0.28
TGFBR3-211ENST00000533370 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
TGFBR3-211ENST00000533370 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
TGFBR3-211ENST00000533370 CPS1P31327 1500 aa16.8■□□□□ 0.28
TGFBR3-211ENST00000533370 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
TGFBR3-211ENST00000533370 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
TGFBR3-211ENST00000533370 CABP2Q9NPB3 220 aa16.8■□□□□ 0.28
TGFBR3-211ENST00000533370 KNDC1Q76NI1 1749 aa16.79■□□□□ 0.28
TGFBR3-211ENST00000533370 KCNA6P17658 529 aa16.79■□□□□ 0.28
TGFBR3-211ENST00000533370 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
TGFBR3-211ENST00000533370 PTCH1Q13635 1447 aa16.79■□□□□ 0.28
TGFBR3-211ENST00000533370 HSPA2P54652 639 aa16.78■□□□□ 0.28
TGFBR3-211ENST00000533370 TMC1Q8TDI8 760 aa16.78■□□□□ 0.28
TGFBR3-211ENST00000533370 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
TGFBR3-211ENST00000533370 TULP4Q9NRJ4 1543 aa16.78■□□□□ 0.28
TGFBR3-211ENST00000533370 ATAD2Q6PL18 1390 aa16.77■□□□□ 0.28
TGFBR3-211ENST00000533370 NINLQ9Y2I6 1382 aa16.77■□□□□ 0.28
TGFBR3-211ENST00000533370 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
TGFBR3-211ENST00000533370 KTN1Q86UP2 1357 aaKnown RBP16.76■□□□□ 0.27
TGFBR3-211ENST00000533370 LMTK3Q96Q04 1460 aa16.75■□□□□ 0.27
TGFBR3-211ENST00000533370 RALBP1Q15311 655 aa16.75■□□□□ 0.27
TGFBR3-211ENST00000533370 CARD14Q9BXL6 1004 aa16.73■□□□□ 0.27
TGFBR3-211ENST00000533370 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
TGFBR3-211ENST00000533370 NUDT16Q96DE0 195 aaKnown RBP16.72■□□□□ 0.27
TGFBR3-211ENST00000533370 XRN1Q8IZH2 1706 aaKnown RBP16.71■□□□□ 0.27
TGFBR3-211ENST00000533370 FKBP8Q14318 412 aa16.71■□□□□ 0.27
TGFBR3-211ENST00000533370 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
TGFBR3-211ENST00000533370 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
TGFBR3-211ENST00000533370 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
TGFBR3-211ENST00000533370 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
TGFBR3-211ENST00000533370 ANKRD36BQ8N2N9 1353 aa16.69■□□□□ 0.26
TGFBR3-211ENST00000533370 CHD2O14647 1828 aaKnown RBP16.69■□□□□ 0.26
TGFBR3-211ENST00000533370 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
TGFBR3-211ENST00000533370 PROSER2Q86WR7 435 aaPredicted RBP16.68■□□□□ 0.26
TGFBR3-211ENST00000533370 MYOM1P52179 1685 aa16.68■□□□□ 0.26
TGFBR3-211ENST00000533370 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.67■□□□□ 0.26
TGFBR3-211ENST00000533370 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
TGFBR3-211ENST00000533370 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
TGFBR3-211ENST00000533370 ADGRB2O60241 1585 aa16.67■□□□□ 0.26
TGFBR3-211ENST00000533370 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
TGFBR3-211ENST00000533370 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
TGFBR3-211ENST00000533370 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
TGFBR3-211ENST00000533370 CGNL1Q0VF96 1302 aa16.65■□□□□ 0.26
TGFBR3-211ENST00000533370 MYBBP1AQ9BQG0 1328 aaKnown RBP16.65■□□□□ 0.26
TGFBR3-211ENST00000533370 PRR36Q9H6K5 1346 aa16.64■□□□□ 0.25
TGFBR3-211ENST00000533370 PPIP5K1Q6PFW1 1433 aa16.63■□□□□ 0.25
TGFBR3-211ENST00000533370 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
TGFBR3-211ENST00000533370 NWD1Q149M9 1564 aa16.63■□□□□ 0.25
TGFBR3-211ENST00000533370 A0A1W2PP64 1363 aa16.63■□□□□ 0.25
TGFBR3-211ENST00000533370 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
TGFBR3-211ENST00000533370 NKTRP30414 1462 aaKnown RBP16.62■□□□□ 0.25
TGFBR3-211ENST00000533370 ATP7BP35670 1465 aa16.62■□□□□ 0.25
TGFBR3-211ENST00000533370 C14orf37Q86TY3 774 aa16.62■□□□□ 0.25
TGFBR3-211ENST00000533370 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
TGFBR3-211ENST00000533370 NLRP13Q86W25 1043 aa16.61■□□□□ 0.25
TGFBR3-211ENST00000533370 C19orf44Q9H6X5 657 aa16.61■□□□□ 0.25
TGFBR3-211ENST00000533370 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
TGFBR3-211ENST00000533370 CPSF1Q10570 1443 aaKnown RBP16.61■□□□□ 0.25
TGFBR3-211ENST00000533370 ANKARQ7Z5J8 1434 aa16.61■□□□□ 0.25
TGFBR3-211ENST00000533370 STRCQ7RTU9 1775 aa16.6■□□□□ 0.25
TGFBR3-211ENST00000533370 RBM33Q96EV2 1170 aaKnown RBP16.6■□□□□ 0.25
TGFBR3-211ENST00000533370 NSD2O96028 1365 aa16.6■□□□□ 0.25
TGFBR3-211ENST00000533370 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
TGFBR3-211ENST00000533370 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
TGFBR3-211ENST00000533370 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
TGFBR3-211ENST00000533370 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
TGFBR3-211ENST00000533370 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
TGFBR3-211ENST00000533370 ACEP12821 1306 aa16.57■□□□□ 0.24
TGFBR3-211ENST00000533370 FYB1O15117 783 aa16.57■□□□□ 0.24
TGFBR3-211ENST00000533370 PPP2R1AP30153 589 aa16.57■□□□□ 0.24
TGFBR3-211ENST00000533370 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
TGFBR3-211ENST00000533370 EDC4Q6P2E9 1401 aaKnown RBP16.55■□□□□ 0.24
TGFBR3-211ENST00000533370 TMEM94Q12767 1356 aa16.55■□□□□ 0.24
TGFBR3-211ENST00000533370 NGDNQ8NEJ9 315 aaKnown RBP16.55■□□□□ 0.24
TGFBR3-211ENST00000533370 USP32Q8NFA0 1604 aa16.55■□□□□ 0.24
TGFBR3-211ENST00000533370 POLR3AO14802 1390 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms