RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 ZFYVE9O95405 1425 aa17.78■□□□□ 0.44
CAPRIN1-212ENST00000532820 YTHDC2Q9H6S0 1430 aaKnown RBP17.78■□□□□ 0.44
CAPRIN1-212ENST00000532820 APAF1O14727 1248 aa17.78■□□□□ 0.44
CAPRIN1-212ENST00000532820 ARHGEF28Q8N1W1 1705 aaKnown RBP17.77■□□□□ 0.44
CAPRIN1-212ENST00000532820 PLIN1O60240 522 aa17.77■□□□□ 0.44
CAPRIN1-212ENST00000532820 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.44
CAPRIN1-212ENST00000532820 A2ML1A8K2U0 1454 aa17.77■□□□□ 0.43
CAPRIN1-212ENST00000532820 ARHGEF40Q8TER5 1519 aa17.77■□□□□ 0.43
CAPRIN1-212ENST00000532820 RIMS2Q9UQ26 1411 aa17.76■□□□□ 0.43
CAPRIN1-212ENST00000532820 REREQ9P2R6 1566 aa17.75■□□□□ 0.43
CAPRIN1-212ENST00000532820 CGNL1Q0VF96 1302 aa17.75■□□□□ 0.43
CAPRIN1-212ENST00000532820 PDE3BQ13370 1112 aa17.75■□□□□ 0.43
CAPRIN1-212ENST00000532820 GGNBP2Q9H3C7 697 aa17.75■□□□□ 0.43
CAPRIN1-212ENST00000532820 MTHFSP49914 203 aa17.75■□□□□ 0.43
CAPRIN1-212ENST00000532820 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
CAPRIN1-212ENST00000532820 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
CAPRIN1-212ENST00000532820 CDK19Q9BWU1 502 aa17.75■□□□□ 0.43
CAPRIN1-212ENST00000532820 RNF123Q5XPI4 1314 aa17.74■□□□□ 0.43
CAPRIN1-212ENST00000532820 ALKQ9UM73 1620 aa17.74■□□□□ 0.43
CAPRIN1-212ENST00000532820 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
CAPRIN1-212ENST00000532820 TXNDC2Q86VQ3 553 aa17.73■□□□□ 0.43
CAPRIN1-212ENST00000532820 PTPRMP28827 1452 aa17.73■□□□□ 0.43
CAPRIN1-212ENST00000532820 CABP1Q9NZU7 370 aa17.72■□□□□ 0.43
CAPRIN1-212ENST00000532820 CCDC136Q96JN2 1154 aa17.72■□□□□ 0.43
CAPRIN1-212ENST00000532820 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
CAPRIN1-212ENST00000532820 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
CAPRIN1-212ENST00000532820 SPATA31D1Q6ZQQ2 1576 aa17.71■□□□□ 0.43
CAPRIN1-212ENST00000532820 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
CAPRIN1-212ENST00000532820 ANKRD36BQ8N2N9 1353 aa17.71■□□□□ 0.43
CAPRIN1-212ENST00000532820 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
CAPRIN1-212ENST00000532820 METP08581 1390 aa17.69■□□□□ 0.42
CAPRIN1-212ENST00000532820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
CAPRIN1-212ENST00000532820 TNRQ92752 1358 aa17.68■□□□□ 0.42
CAPRIN1-212ENST00000532820 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
CAPRIN1-212ENST00000532820 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
CAPRIN1-212ENST00000532820 FBLN1P23142 703 aa17.68■□□□□ 0.42
CAPRIN1-212ENST00000532820 NCKAP5LQ9HCH0 1330 aa17.67■□□□□ 0.42
CAPRIN1-212ENST00000532820 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
CAPRIN1-212ENST00000532820 DUSP27Q5VZP5 1158 aa17.66■□□□□ 0.42
CAPRIN1-212ENST00000532820 TERF2IPQ9NYB0 399 aa17.66■□□□□ 0.42
CAPRIN1-212ENST00000532820 INSRP06213 1382 aa17.65■□□□□ 0.42
CAPRIN1-212ENST00000532820 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
CAPRIN1-212ENST00000532820 FYB1O15117 783 aa17.65■□□□□ 0.42
CAPRIN1-212ENST00000532820 PUS7Q96PZ0 661 aaKnown RBP17.65■□□□□ 0.42
CAPRIN1-212ENST00000532820 POLR3AO14802 1390 aaPredicted RBP17.64■□□□□ 0.41
CAPRIN1-212ENST00000532820 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.41
CAPRIN1-212ENST00000532820 SLC26A8Q96RN1 970 aa17.64■□□□□ 0.41
CAPRIN1-212ENST00000532820 ZNF521Q96K83 1311 aa17.64■□□□□ 0.41
CAPRIN1-212ENST00000532820 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
CAPRIN1-212ENST00000532820 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
CAPRIN1-212ENST00000532820 LTKP29376 864 aa17.63■□□□□ 0.41
CAPRIN1-212ENST00000532820 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
CAPRIN1-212ENST00000532820 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
CAPRIN1-212ENST00000532820 PPM1GO15355 546 aaPredicted RBP17.63■□□□□ 0.41
CAPRIN1-212ENST00000532820 HDGFL2Q7Z4V5 671 aaPredicted RBP17.63■□□□□ 0.41
CAPRIN1-212ENST00000532820 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
CAPRIN1-212ENST00000532820 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
CAPRIN1-212ENST00000532820 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
CAPRIN1-212ENST00000532820 TCP11L2Q8N4U5 519 aa17.6■□□□□ 0.41
CAPRIN1-212ENST00000532820 ABCC11Q96J66 1382 aa17.6■□□□□ 0.41
CAPRIN1-212ENST00000532820 HDGFP51858 240 aaKnown RBP17.6■□□□□ 0.41
CAPRIN1-212ENST00000532820 CD163L1Q9NR16 1453 aa17.6■□□□□ 0.41
CAPRIN1-212ENST00000532820 TMEM2Q9UHN6 1383 aa17.59■□□□□ 0.41
CAPRIN1-212ENST00000532820 CRBNQ96SW2 442 aa17.59■□□□□ 0.41
CAPRIN1-212ENST00000532820 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.41
CAPRIN1-212ENST00000532820 WWC1Q8IX03 1113 aa17.58■□□□□ 0.41
CAPRIN1-212ENST00000532820 RUNDC1Q96C34 613 aa17.57■□□□□ 0.4
CAPRIN1-212ENST00000532820 ZRANB1Q9UGI0 708 aa17.57■□□□□ 0.4
CAPRIN1-212ENST00000532820 NRXN3Q9Y4C0 1643 aa17.56■□□□□ 0.4
CAPRIN1-212ENST00000532820 NINLQ9Y2I6 1382 aa17.56■□□□□ 0.4
CAPRIN1-212ENST00000532820 BCAR3O75815 825 aa17.56■□□□□ 0.4
CAPRIN1-212ENST00000532820 NUDT16Q96DE0 195 aaKnown RBP17.56■□□□□ 0.4
CAPRIN1-212ENST00000532820 NSD2O96028 1365 aa17.55■□□□□ 0.4
CAPRIN1-212ENST00000532820 PRKCSHP14314 528 aaPredicted RBP17.54■□□□□ 0.4
CAPRIN1-212ENST00000532820 NME9Q86XW9 330 aa17.54■□□□□ 0.4
CAPRIN1-212ENST00000532820 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
CAPRIN1-212ENST00000532820 ROBO2Q9HCK4 1378 aa17.53■□□□□ 0.4
CAPRIN1-212ENST00000532820 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
CAPRIN1-212ENST00000532820 E9PSI1 815 aa17.53■□□□□ 0.4
CAPRIN1-212ENST00000532820 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
CAPRIN1-212ENST00000532820 SKAP1Q86WV1 359 aa17.53■□□□□ 0.4
CAPRIN1-212ENST00000532820 PPIP5K1Q6PFW1 1433 aa17.52■□□□□ 0.4
CAPRIN1-212ENST00000532820 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
CAPRIN1-212ENST00000532820 USP32Q8NFA0 1604 aa17.52■□□□□ 0.4
CAPRIN1-212ENST00000532820 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
CAPRIN1-212ENST00000532820 UBR1Q8IWV7 1749 aa17.51■□□□□ 0.39
CAPRIN1-212ENST00000532820 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
CAPRIN1-212ENST00000532820 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
CAPRIN1-212ENST00000532820 DLC1Q96QB1 1528 aa17.49■□□□□ 0.39
CAPRIN1-212ENST00000532820 ADAMTS13Q76LX8 1427 aa17.49■□□□□ 0.39
CAPRIN1-212ENST00000532820 PRR36Q9H6K5 1346 aa17.49■□□□□ 0.39
CAPRIN1-212ENST00000532820 EMILIN1Q9Y6C2 1016 aa17.49■□□□□ 0.39
CAPRIN1-212ENST00000532820 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
CAPRIN1-212ENST00000532820 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
CAPRIN1-212ENST00000532820 NKTRP30414 1462 aaKnown RBP17.48■□□□□ 0.39
CAPRIN1-212ENST00000532820 SOX12O15370 315 aa17.47■□□□□ 0.39
CAPRIN1-212ENST00000532820 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
CAPRIN1-212ENST00000532820 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
CAPRIN1-212ENST00000532820 AMOTL2Q9Y2J4 779 aa17.47■□□□□ 0.39
CAPRIN1-212ENST00000532820 HMOX1P09601 288 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms