RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
ARID1A-208ENST00000532781 TNRQ92752 1358 aa18.76■□□□□ 0.59
ARID1A-208ENST00000532781 NRXN3Q9Y4C0 1643 aa18.75■□□□□ 0.59
ARID1A-208ENST00000532781 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
ARID1A-208ENST00000532781 METP08581 1390 aa18.75■□□□□ 0.59
ARID1A-208ENST00000532781 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
ARID1A-208ENST00000532781 WDR43Q15061 677 aaKnown RBP eCLIP18.73■□□□□ 0.59
ARID1A-208ENST00000532781 TXNDC2Q86VQ3 553 aa18.73■□□□□ 0.59
ARID1A-208ENST00000532781 BLMP54132 1417 aaPredicted RBP18.72■□□□□ 0.59
ARID1A-208ENST00000532781 MORC1Q86VD1 984 aa18.72■□□□□ 0.59
ARID1A-208ENST00000532781 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
ARID1A-208ENST00000532781 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
ARID1A-208ENST00000532781 CDK19Q9BWU1 502 aa18.71■□□□□ 0.59
ARID1A-208ENST00000532781 A0A1W2PP64 1363 aa18.71■□□□□ 0.58
ARID1A-208ENST00000532781 NCKAP5LQ9HCH0 1330 aa18.7■□□□□ 0.58
ARID1A-208ENST00000532781 LTKP29376 864 aa18.7■□□□□ 0.58
ARID1A-208ENST00000532781 C3P01024 1663 aa18.69■□□□□ 0.58
ARID1A-208ENST00000532781 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
ARID1A-208ENST00000532781 GGNBP2Q9H3C7 697 aa18.68■□□□□ 0.58
ARID1A-208ENST00000532781 FER1L4A9Z1Z3 1794 aa18.67■□□□□ 0.58
ARID1A-208ENST00000532781 SLC26A8Q96RN1 970 aa18.67■□□□□ 0.58
ARID1A-208ENST00000532781 CABP1Q9NZU7 370 aa18.67■□□□□ 0.58
ARID1A-208ENST00000532781 ANKRD36BQ8N2N9 1353 aa18.66■□□□□ 0.58
ARID1A-208ENST00000532781 FBLN1P23142 703 aa18.66■□□□□ 0.58
ARID1A-208ENST00000532781 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
ARID1A-208ENST00000532781 TMEM2Q9UHN6 1383 aa18.65■□□□□ 0.58
ARID1A-208ENST00000532781 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
ARID1A-208ENST00000532781 CGNL1Q0VF96 1302 aa18.64■□□□□ 0.58
ARID1A-208ENST00000532781 CD163L1Q9NR16 1453 aa18.64■□□□□ 0.57
ARID1A-208ENST00000532781 MTHFSP49914 203 aa18.64■□□□□ 0.57
ARID1A-208ENST00000532781 APAF1O14727 1248 aa18.63■□□□□ 0.57
ARID1A-208ENST00000532781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.57
ARID1A-208ENST00000532781 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
ARID1A-208ENST00000532781 PLIN1O60240 522 aa18.6■□□□□ 0.57
ARID1A-208ENST00000532781 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.6■□□□□ 0.57
ARID1A-208ENST00000532781 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
ARID1A-208ENST00000532781 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
ARID1A-208ENST00000532781 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
ARID1A-208ENST00000532781 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
ARID1A-208ENST00000532781 TSHZ2Q9NRE2 1034 aa18.59■□□□□ 0.57
ARID1A-208ENST00000532781 FYB1O15117 783 aa18.58■□□□□ 0.57
ARID1A-208ENST00000532781 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.57
ARID1A-208ENST00000532781 ADAMTS13Q76LX8 1427 aa18.58■□□□□ 0.56
ARID1A-208ENST00000532781 USP32Q8NFA0 1604 aa18.58■□□□□ 0.56
ARID1A-208ENST00000532781 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.56
ARID1A-208ENST00000532781 ABCC11Q96J66 1382 aa18.58■□□□□ 0.56
ARID1A-208ENST00000532781 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
ARID1A-208ENST00000532781 ZRANB1Q9UGI0 708 aa18.57■□□□□ 0.56
ARID1A-208ENST00000532781 DLC1Q96QB1 1528 aa18.55■□□□□ 0.56
ARID1A-208ENST00000532781 RNF123Q5XPI4 1314 aa18.55■□□□□ 0.56
ARID1A-208ENST00000532781 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
ARID1A-208ENST00000532781 PPP4R2Q9NY27 417 aa18.55■□□□□ 0.56
ARID1A-208ENST00000532781 TERF2IPQ9NYB0 399 aa18.55■□□□□ 0.56
ARID1A-208ENST00000532781 POLR3AO14802 1390 aaPredicted RBP18.54■□□□□ 0.56
ARID1A-208ENST00000532781 WASLO00401 505 aaPredicted RBP18.54■□□□□ 0.56
ARID1A-208ENST00000532781 RIMS1Q86UR5 1692 aaKnown RBP18.54■□□□□ 0.56
ARID1A-208ENST00000532781 RRP1P56182 461 aaKnown RBP18.53■□□□□ 0.56
ARID1A-208ENST00000532781 PTPRUQ92729 1446 aa18.53■□□□□ 0.56
ARID1A-208ENST00000532781 NLRP1Q9C000 1473 aa18.52■□□□□ 0.56
ARID1A-208ENST00000532781 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
ARID1A-208ENST00000532781 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
ARID1A-208ENST00000532781 ZNF521Q96K83 1311 aa18.52■□□□□ 0.56
ARID1A-208ENST00000532781 PPIP5K1Q6PFW1 1433 aa18.52■□□□□ 0.56
ARID1A-208ENST00000532781 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.55
ARID1A-208ENST00000532781 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.51■□□□□ 0.55
ARID1A-208ENST00000532781 HDGFP51858 240 aaKnown RBP18.51■□□□□ 0.55
ARID1A-208ENST00000532781 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
ARID1A-208ENST00000532781 NUDT16Q96DE0 195 aaKnown RBP18.51■□□□□ 0.55
ARID1A-208ENST00000532781 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
ARID1A-208ENST00000532781 NME9Q86XW9 330 aa18.5■□□□□ 0.55
ARID1A-208ENST00000532781 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
ARID1A-208ENST00000532781 KIF20BQ96Q89 1820 aa18.5■□□□□ 0.55
ARID1A-208ENST00000532781 RBM33Q96EV2 1170 aaKnown RBP18.5■□□□□ 0.55
ARID1A-208ENST00000532781 INSRP06213 1382 aa18.49■□□□□ 0.55
ARID1A-208ENST00000532781 U2AF1L5P0DN76 240 aaPredicted RBP18.49■□□□□ 0.55
ARID1A-208ENST00000532781 U2AF1Q01081 240 aaKnown RBP eCLIP18.49■□□□□ 0.552e-17■■■□□ 18.3
ARID1A-208ENST00000532781 EID1Q9Y6B2 187 aa18.49■□□□□ 0.55
ARID1A-208ENST00000532781 PLEKHG1Q9ULL1 1385 aa18.49■□□□□ 0.55
ARID1A-208ENST00000532781 KNDC1Q76NI1 1749 aa18.49■□□□□ 0.55
ARID1A-208ENST00000532781 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
ARID1A-208ENST00000532781 GOLGA2Q08379 1002 aa18.49■□□□□ 0.55
ARID1A-208ENST00000532781 NINLQ9Y2I6 1382 aa18.48■□□□□ 0.55
ARID1A-208ENST00000532781 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
ARID1A-208ENST00000532781 CPS1P31327 1500 aa18.48■□□□□ 0.55
ARID1A-208ENST00000532781 ANKRD26Q9UPS8 1709 aa18.47■□□□□ 0.55
ARID1A-208ENST00000532781 AMOTL2Q9Y2J4 779 aa18.47■□□□□ 0.55
ARID1A-208ENST00000532781 TCP11L2Q8N4U5 519 aa18.46■□□□□ 0.55
ARID1A-208ENST00000532781 NSD2O96028 1365 aa18.46■□□□□ 0.55
ARID1A-208ENST00000532781 TECPR2O15040 1411 aa18.46■□□□□ 0.55
ARID1A-208ENST00000532781 SLFN5Q08AF3 891 aa18.45■□□□□ 0.54
ARID1A-208ENST00000532781 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
ARID1A-208ENST00000532781 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
ARID1A-208ENST00000532781 ATP7BP35670 1465 aa18.44■□□□□ 0.54
ARID1A-208ENST00000532781 FAM135BQ49AJ0 1406 aa18.43■□□□□ 0.54
ARID1A-208ENST00000532781 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
ARID1A-208ENST00000532781 THEMISQ8N1K5 641 aaPredicted RBP18.43■□□□□ 0.54
ARID1A-208ENST00000532781 EMILIN1Q9Y6C2 1016 aa18.43■□□□□ 0.54
ARID1A-208ENST00000532781 RGPD8O14715 1765 aaPredicted RBP18.43■□□□□ 0.54
ARID1A-208ENST00000532781 CCDC136Q96JN2 1154 aa18.43■□□□□ 0.54
ARID1A-208ENST00000532781 SLIT1O75093 1534 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms