RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ORAI2Q96SN7 254 aa26.31■■□□□ 1.8
SMG1-203ENST00000532700 ABCC11Q96J66 1382 aa26.3■■□□□ 1.8
SMG1-203ENST00000532700 C14orf93Q9H972 538 aaKnown RBP26.29■■□□□ 1.8
SMG1-203ENST00000532700 FMN2Q9NZ56 1722 aa26.28■■□□□ 1.8
SMG1-203ENST00000532700 ADGRB1O14514 1584 aa26.28■■□□□ 1.8
SMG1-203ENST00000532700 HRCP23327 699 aa26.26■■□□□ 1.79
SMG1-203ENST00000532700 DHX57Q6P158 1386 aaKnown RBP26.24■■□□□ 1.79
SMG1-203ENST00000532700 SPATA31A6Q5VVP1 1343 aa26.24■■□□□ 1.79
SMG1-203ENST00000532700 RGPD8O14715 1765 aaPredicted RBP26.24■■□□□ 1.79
SMG1-203ENST00000532700 PNPLA6Q8IY17 1366 aa26.23■■□□□ 1.79
SMG1-203ENST00000532700 NUTM2FA1L443 756 aa26.21■■□□□ 1.79
SMG1-203ENST00000532700 NUTM2BA6NNL0 878 aaPredicted RBP26.2■■□□□ 1.78
SMG1-203ENST00000532700 NUTM2EB1AL46 878 aaPredicted RBP26.2■■□□□ 1.78
SMG1-203ENST00000532700 NUTM2AQ8IVF1 878 aaPredicted RBP26.2■■□□□ 1.78
SMG1-203ENST00000532700 KDM2AQ9Y2K7 1162 aa26.19■■□□□ 1.78
SMG1-203ENST00000532700 PXDNQ92626 1479 aa26.18■■□□□ 1.78
SMG1-203ENST00000532700 SOS2Q07890 1332 aaPredicted RBP26.17■■□□□ 1.78
SMG1-203ENST00000532700 DCAF11Q8TEB1 546 aa26.17■■□□□ 1.78
SMG1-203ENST00000532700 USP32Q8NFA0 1604 aa26.17■■□□□ 1.78
SMG1-203ENST00000532700 DLC1Q96QB1 1528 aa26.16■■□□□ 1.78
SMG1-203ENST00000532700 LRRC59Q96AG4 307 aaKnown RBP26.15■■□□□ 1.78
SMG1-203ENST00000532700 SAFB2Q14151 953 aaKnown RBP eCLIP26.14■■□□□ 1.78
SMG1-203ENST00000532700 ESCO1Q5FWF5 840 aa26.14■■□□□ 1.78
SMG1-203ENST00000532700 COL22A1Q8NFW1 1626 aaPredicted RBP26.14■■□□□ 1.77
SMG1-203ENST00000532700 XPCQ01831 940 aaPredicted RBP26.13■■□□□ 1.77
SMG1-203ENST00000532700 MEX3CQ5U5Q3 659 aaKnown RBP26.13■■□□□ 1.77
SMG1-203ENST00000532700 PRAM1Q96QH2 718 aa26.13■■□□□ 1.77
SMG1-203ENST00000532700 ARHGEF28Q8N1W1 1705 aaKnown RBP26.12■■□□□ 1.77
SMG1-203ENST00000532700 ADGRB2O60241 1585 aa26.11■■□□□ 1.77
SMG1-203ENST00000532700 KIF1AQ12756 1690 aa26.1■■□□□ 1.77
SMG1-203ENST00000532700 SIRT1Q96EB6 747 aa26.1■■□□□ 1.77
SMG1-203ENST00000532700 FOXO3O43524 673 aa26.08■■□□□ 1.77
SMG1-203ENST00000532700 TRAK1Q9UPV9 953 aa26.07■■□□□ 1.76
SMG1-203ENST00000532700 AFF2P51816 1311 aa26.06■■□□□ 1.76
SMG1-203ENST00000532700 NPHP3Q7Z494 1330 aa26.04■■□□□ 1.76
SMG1-203ENST00000532700 MARF1Q9Y4F3 1742 aaKnown RBP26.03■■□□□ 1.76
SMG1-203ENST00000532700 HIRIP3Q9BW71 556 aaPredicted RBP26.03■■□□□ 1.76
SMG1-203ENST00000532700 ADAMTS2O95450 1211 aa26.02■■□□□ 1.76
SMG1-203ENST00000532700 C8orf37Q96NL8 207 aa26.02■■□□□ 1.76
SMG1-203ENST00000532700 KIAA1210Q9ULL0 1709 aa26.02■■□□□ 1.76
SMG1-203ENST00000532700 POGKQ9P215 609 aa26■■□□□ 1.75
SMG1-203ENST00000532700 MINK1Q8N4C8 1332 aaPredicted RBP25.99■■□□□ 1.75
SMG1-203ENST00000532700 PRR36Q9H6K5 1346 aa25.99■■□□□ 1.75
SMG1-203ENST00000532700 ZNF772Q68DY9 489 aaPredicted RBP25.99■■□□□ 1.75
SMG1-203ENST00000532700 ABCA3Q99758 1704 aa25.98■■□□□ 1.75
SMG1-203ENST00000532700 TRPM3Q9HCF6 1732 aaPredicted RBP25.97■■□□□ 1.75
SMG1-203ENST00000532700 TULP4Q9NRJ4 1543 aa25.95■■□□□ 1.74
SMG1-203ENST00000532700 NBPF1Q3BBV0 1214 aa25.95■■□□□ 1.74
SMG1-203ENST00000532700 SIN3AQ96ST3 1273 aa25.95■■□□□ 1.74
SMG1-203ENST00000532700 PHF8Q9UPP1 1060 aa25.95■■□□□ 1.74
SMG1-203ENST00000532700 ANKARQ7Z5J8 1434 aa25.94■■□□□ 1.74
SMG1-203ENST00000532700 SPATA31A3Q5VYP0 1347 aa25.93■■□□□ 1.74
SMG1-203ENST00000532700 STAC3Q96MF2 364 aa25.93■■□□□ 1.74
SMG1-203ENST00000532700 KRT28Q7Z3Y7 464 aa25.92■■□□□ 1.74
SMG1-203ENST00000532700 PMFBP1Q8TBY8 1022 aa25.92■■□□□ 1.74
SMG1-203ENST00000532700 RGS12O14924 1447 aa25.9■■□□□ 1.74
SMG1-203ENST00000532700 TNS3Q68CZ2 1445 aa25.9■■□□□ 1.74
SMG1-203ENST00000532700 NGLY1Q96IV0 654 aa25.9■■□□□ 1.74
SMG1-203ENST00000532700 ATP7BP35670 1465 aa25.89■■□□□ 1.73
SMG1-203ENST00000532700 ALS2Q96Q42 1657 aa25.89■■□□□ 1.73
SMG1-203ENST00000532700 TOPAZ1Q8N9V7 1692 aa25.88■■□□□ 1.73
SMG1-203ENST00000532700 RXRBP28702 533 aa25.88■■□□□ 1.73
SMG1-203ENST00000532700 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
SMG1-203ENST00000532700 TRPM1Q7Z4N2 1603 aa25.88■■□□□ 1.73
SMG1-203ENST00000532700 CDK12Q9NYV4 1490 aaPredicted RBP25.87■■□□□ 1.73
SMG1-203ENST00000532700 WASLO00401 505 aaPredicted RBP25.87■■□□□ 1.73
SMG1-203ENST00000532700 QTRT2Q9H974 415 aaKnown RBP25.87■■□□□ 1.73
SMG1-203ENST00000532700 BCL9LQ86UU0 1499 aa25.86■■□□□ 1.73
SMG1-203ENST00000532700 ITSN1Q15811 1721 aa25.86■■□□□ 1.73
SMG1-203ENST00000532700 CRYBG1Q9Y4K1 1723 aa25.85■■□□□ 1.73
SMG1-203ENST00000532700 PLEKHG5O94827 1062 aa25.85■■□□□ 1.73
SMG1-203ENST00000532700 CABLES1Q8TDN4 633 aa25.85■■□□□ 1.73
SMG1-203ENST00000532700 ATRNO75882 1429 aa25.84■■□□□ 1.73
SMG1-203ENST00000532700 FNBP4Q8N3X1 1017 aaPredicted RBP25.84■■□□□ 1.73
SMG1-203ENST00000532700 PLCH1Q4KWH8 1693 aa25.83■■□□□ 1.73
SMG1-203ENST00000532700 QRICH2Q9H0J4 1663 aa25.83■■□□□ 1.73
SMG1-203ENST00000532700 USP21Q9UK80 565 aa25.83■■□□□ 1.73
SMG1-203ENST00000532700 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.83■■□□□ 1.72
SMG1-203ENST00000532700 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
SMG1-203ENST00000532700 NEUROD1Q13562 356 aa25.81■■□□□ 1.72
SMG1-203ENST00000532700 SLIT2O94813 1529 aa25.79■■□□□ 1.72
SMG1-203ENST00000532700 RBM6P78332 1123 aaKnown RBP25.79■■□□□ 1.72
SMG1-203ENST00000532700 PSME1Q06323 249 aa25.79■■□□□ 1.72
SMG1-203ENST00000532700 GLI3P10071 1580 aa25.78■■□□□ 1.72
SMG1-203ENST00000532700 CDK19Q9BWU1 502 aa25.77■■□□□ 1.72
SMG1-203ENST00000532700 EIF3AQ14152 1382 aaKnown RBP25.77■■□□□ 1.72
SMG1-203ENST00000532700 LMOD2Q6P5Q4 547 aa25.76■■□□□ 1.71
SMG1-203ENST00000532700 NUDT16Q96DE0 195 aaKnown RBP25.76■■□□□ 1.71
SMG1-203ENST00000532700 UPF1Q92900 1129 aaKnown RBP eCLIP25.75■■□□□ 1.71
SMG1-203ENST00000532700 NRAPQ86VF7 1730 aa25.74■■□□□ 1.71
SMG1-203ENST00000532700 NBPF8Q3BBV2 869 aa25.73■■□□□ 1.71
SMG1-203ENST00000532700 TRPC5Q9UL62 973 aaPredicted RBP25.73■■□□□ 1.71
SMG1-203ENST00000532700 ARHGEF10O15013 1369 aa25.72■■□□□ 1.71
SMG1-203ENST00000532700 NWD2Q9ULI1 1742 aa25.72■■□□□ 1.71
SMG1-203ENST00000532700 PHRF1Q9P1Y6 1649 aaKnown RBP25.71■■□□□ 1.71
SMG1-203ENST00000532700 CENPJQ9HC77 1338 aaPredicted RBP25.7■■□□□ 1.71
SMG1-203ENST00000532700 GPRASP1Q5JY77 1395 aa25.69■■□□□ 1.7
SMG1-203ENST00000532700 RALGAPBQ86X10 1494 aa25.69■■□□□ 1.7
SMG1-203ENST00000532700 NGDNQ8NEJ9 315 aaKnown RBP25.69■■□□□ 1.7
SMG1-203ENST00000532700 POLR3AO14802 1390 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms