RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
SRPRA-207ENST00000532268 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
SRPRA-207ENST00000532268 EVC2Q86UK5 1308 aa13.25□□□□□ -0.29
SRPRA-207ENST00000532268 CDCA8Q53HL2 280 aa13.25□□□□□ -0.29
SRPRA-207ENST00000532268 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
SRPRA-207ENST00000532268 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
SRPRA-207ENST00000532268 SOCS7O14512 581 aa13.24□□□□□ -0.29
SRPRA-207ENST00000532268 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
SRPRA-207ENST00000532268 ILDR2Q71H61 639 aa13.24□□□□□ -0.29
SRPRA-207ENST00000532268 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
SRPRA-207ENST00000532268 CHD2O14647 1828 aaKnown RBP13.24□□□□□ -0.29
SRPRA-207ENST00000532268 XRN1Q8IZH2 1706 aaKnown RBP13.24□□□□□ -0.29
SRPRA-207ENST00000532268 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
SRPRA-207ENST00000532268 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
SRPRA-207ENST00000532268 C11orf95C9JLR9 678 aaPredicted RBP13.23□□□□□ -0.29
SRPRA-207ENST00000532268 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
SRPRA-207ENST00000532268 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
SRPRA-207ENST00000532268 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
SRPRA-207ENST00000532268 UBAP1LF5GYI3 381 aa13.21□□□□□ -0.29
SRPRA-207ENST00000532268 CDK19Q9BWU1 502 aa13.21□□□□□ -0.29
SRPRA-207ENST00000532268 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.29
SRPRA-207ENST00000532268 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
SRPRA-207ENST00000532268 TOM1O60784 492 aa13.2□□□□□ -0.3
SRPRA-207ENST00000532268 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
SRPRA-207ENST00000532268 TMC1Q8TDI8 760 aa13.2□□□□□ -0.3
SRPRA-207ENST00000532268 CABP2Q9NPB3 220 aa13.2□□□□□ -0.3
SRPRA-207ENST00000532268 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
SRPRA-207ENST00000532268 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
SRPRA-207ENST00000532268 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
SRPRA-207ENST00000532268 WASLO00401 505 aaPredicted RBP13.18□□□□□ -0.3
SRPRA-207ENST00000532268 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
SRPRA-207ENST00000532268 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
SRPRA-207ENST00000532268 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.16□□□□□ -0.3
SRPRA-207ENST00000532268 ADGRL3Q9HAR2 1447 aa13.15□□□□□ -0.3
SRPRA-207ENST00000532268 ATF3P18847 181 aa13.15□□□□□ -0.3
SRPRA-207ENST00000532268 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
SRPRA-207ENST00000532268 NUDT16Q96DE0 195 aaKnown RBP13.14□□□□□ -0.31
SRPRA-207ENST00000532268 C19orf44Q9H6X5 657 aa13.14□□□□□ -0.31
SRPRA-207ENST00000532268 MSH6P52701 1360 aa13.14□□□□□ -0.31
SRPRA-207ENST00000532268 ADGRB2O60241 1585 aa13.13□□□□□ -0.31
SRPRA-207ENST00000532268 DIEXFQ68CQ4 756 aaKnown RBP13.13□□□□□ -0.31
SRPRA-207ENST00000532268 PUS7Q96PZ0 661 aaKnown RBP13.13□□□□□ -0.31
SRPRA-207ENST00000532268 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
SRPRA-207ENST00000532268 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
SRPRA-207ENST00000532268 SLC12A5Q9H2X9 1139 aa13.12□□□□□ -0.31
SRPRA-207ENST00000532268 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
SRPRA-207ENST00000532268 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
SRPRA-207ENST00000532268 PANK3Q9H999 370 aa13.11□□□□□ -0.31
SRPRA-207ENST00000532268 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
SRPRA-207ENST00000532268 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
SRPRA-207ENST00000532268 HDGFL2Q7Z4V5 671 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-207ENST00000532268 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
SRPRA-207ENST00000532268 PHF23Q9BUL5 403 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-207ENST00000532268 TERF2IPQ9NYB0 399 aa13.1□□□□□ -0.31
SRPRA-207ENST00000532268 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
SRPRA-207ENST00000532268 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
SRPRA-207ENST00000532268 PRR36Q9H6K5 1346 aa13.1□□□□□ -0.31
SRPRA-207ENST00000532268 PPIP5K1Q6PFW1 1433 aa13.09□□□□□ -0.31
SRPRA-207ENST00000532268 NINLQ9Y2I6 1382 aa13.08□□□□□ -0.31
SRPRA-207ENST00000532268 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
SRPRA-207ENST00000532268 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
SRPRA-207ENST00000532268 PMFBP1Q8TBY8 1022 aa13.08□□□□□ -0.32
SRPRA-207ENST00000532268 ATP7BP35670 1465 aa13.08□□□□□ -0.32
SRPRA-207ENST00000532268 ANKARQ7Z5J8 1434 aa13.07□□□□□ -0.32
SRPRA-207ENST00000532268 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
SRPRA-207ENST00000532268 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
SRPRA-207ENST00000532268 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
SRPRA-207ENST00000532268 DCCP43146 1447 aa13.06□□□□□ -0.32
SRPRA-207ENST00000532268 MYOM1P52179 1685 aa13.05□□□□□ -0.32
SRPRA-207ENST00000532268 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
SRPRA-207ENST00000532268 ANKRD36BQ8N2N9 1353 aa13.05□□□□□ -0.32
SRPRA-207ENST00000532268 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
SRPRA-207ENST00000532268 ACEP12821 1306 aa13.04□□□□□ -0.32
SRPRA-207ENST00000532268 KTN1Q86UP2 1357 aaKnown RBP13.04□□□□□ -0.32
SRPRA-207ENST00000532268 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
SRPRA-207ENST00000532268 ITSN1Q15811 1721 aa13.03□□□□□ -0.32
SRPRA-207ENST00000532268 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
SRPRA-207ENST00000532268 ANP32CO43423 234 aa13.03□□□□□ -0.32
SRPRA-207ENST00000532268 HSPA1LP34931 641 aa13.03□□□□□ -0.32
SRPRA-207ENST00000532268 A0A1W2PP64 1363 aa13.03□□□□□ -0.32
SRPRA-207ENST00000532268 NSD3Q9BZ95 1437 aa13.03□□□□□ -0.32
SRPRA-207ENST00000532268 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
SRPRA-207ENST00000532268 PSME1Q06323 249 aa13.02□□□□□ -0.33
SRPRA-207ENST00000532268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.02□□□□□ -0.33
SRPRA-207ENST00000532268 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
SRPRA-207ENST00000532268 MST1RQ04912 1400 aa13.02□□□□□ -0.33
SRPRA-207ENST00000532268 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
SRPRA-207ENST00000532268 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
SRPRA-207ENST00000532268 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
SRPRA-207ENST00000532268 TOPAZ1Q8N9V7 1692 aa13.01□□□□□ -0.33
SRPRA-207ENST00000532268 CGNL1Q0VF96 1302 aa13□□□□□ -0.33
SRPRA-207ENST00000532268 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
SRPRA-207ENST00000532268 FOXO3O43524 673 aa12.99□□□□□ -0.33
SRPRA-207ENST00000532268 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
SRPRA-207ENST00000532268 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
SRPRA-207ENST00000532268 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
SRPRA-207ENST00000532268 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
SRPRA-207ENST00000532268 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
SRPRA-207ENST00000532268 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
SRPRA-207ENST00000532268 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms