RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
VPS26B-207ENST00000532160 ADAMTS2O95450 1211 aa13.89□□□□□ -0.19
VPS26B-207ENST00000532160 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
VPS26B-207ENST00000532160 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
VPS26B-207ENST00000532160 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
VPS26B-207ENST00000532160 QTRT2Q9H974 415 aaKnown RBP13.88□□□□□ -0.19
VPS26B-207ENST00000532160 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
VPS26B-207ENST00000532160 SPATA31E1Q6ZUB1 1445 aa13.87□□□□□ -0.19
VPS26B-207ENST00000532160 CCDC144AA2RUR9 1427 aa13.86□□□□□ -0.19
VPS26B-207ENST00000532160 COL22A1Q8NFW1 1626 aaPredicted RBP13.86□□□□□ -0.19
VPS26B-207ENST00000532160 RBM6P78332 1123 aaKnown RBP13.85□□□□□ -0.19
VPS26B-207ENST00000532160 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
VPS26B-207ENST00000532160 NGLY1Q96IV0 654 aa13.85□□□□□ -0.19
VPS26B-207ENST00000532160 TECPR2O15040 1411 aa13.84□□□□□ -0.19
VPS26B-207ENST00000532160 PXDNQ92626 1479 aa13.84□□□□□ -0.19
VPS26B-207ENST00000532160 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
VPS26B-207ENST00000532160 PLEKHH1Q9ULM0 1364 aa13.83□□□□□ -0.19
VPS26B-207ENST00000532160 MYOM2P54296 1465 aa13.83□□□□□ -0.2
VPS26B-207ENST00000532160 ESCO1Q5FWF5 840 aa13.83□□□□□ -0.2
VPS26B-207ENST00000532160 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
VPS26B-207ENST00000532160 STK26Q9P289 416 aa13.83□□□□□ -0.2
VPS26B-207ENST00000532160 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.2
VPS26B-207ENST00000532160 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
VPS26B-207ENST00000532160 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
VPS26B-207ENST00000532160 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
VPS26B-207ENST00000532160 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
VPS26B-207ENST00000532160 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
VPS26B-207ENST00000532160 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
VPS26B-207ENST00000532160 NPHP3Q7Z494 1330 aa13.82□□□□□ -0.2
VPS26B-207ENST00000532160 EP400Q96L91 3159 aa13.81□□□□□ -0.2
VPS26B-207ENST00000532160 USP21Q9UK80 565 aa13.81□□□□□ -0.2
VPS26B-207ENST00000532160 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
VPS26B-207ENST00000532160 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
VPS26B-207ENST00000532160 FOXO3O43524 673 aa13.8□□□□□ -0.2
VPS26B-207ENST00000532160 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
VPS26B-207ENST00000532160 FMN2Q9NZ56 1722 aa13.8□□□□□ -0.2
VPS26B-207ENST00000532160 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
VPS26B-207ENST00000532160 ATRNO75882 1429 aa13.8□□□□□ -0.2
VPS26B-207ENST00000532160 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
VPS26B-207ENST00000532160 TRPC5Q9UL62 973 aaPredicted RBP13.79□□□□□ -0.2
VPS26B-207ENST00000532160 YTHDC2Q9H6S0 1430 aaKnown RBP13.79□□□□□ -0.2
VPS26B-207ENST00000532160 HRCP23327 699 aa13.77□□□□□ -0.21
VPS26B-207ENST00000532160 BCL9LQ86UU0 1499 aa13.77□□□□□ -0.21
VPS26B-207ENST00000532160 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
VPS26B-207ENST00000532160 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
VPS26B-207ENST00000532160 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
VPS26B-207ENST00000532160 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
VPS26B-207ENST00000532160 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.73□□□□□ -0.21
VPS26B-207ENST00000532160 SPATA31A3Q5VYP0 1347 aa13.73□□□□□ -0.21
VPS26B-207ENST00000532160 KCNA4P22459 653 aa13.73□□□□□ -0.21
VPS26B-207ENST00000532160 CFAP70Q5T0N1 1121 aa13.73□□□□□ -0.21
VPS26B-207ENST00000532160 C14orf93Q9H972 538 aaKnown RBP13.73□□□□□ -0.21
VPS26B-207ENST00000532160 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
VPS26B-207ENST00000532160 SLIT2O94813 1529 aa13.71□□□□□ -0.21
VPS26B-207ENST00000532160 SAFB2Q14151 953 aaKnown RBP eCLIP13.71□□□□□ -0.21
VPS26B-207ENST00000532160 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
VPS26B-207ENST00000532160 GLI3P10071 1580 aa13.71□□□□□ -0.22
VPS26B-207ENST00000532160 KRT28Q7Z3Y7 464 aa13.7□□□□□ -0.22
VPS26B-207ENST00000532160 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
VPS26B-207ENST00000532160 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
VPS26B-207ENST00000532160 TNS3Q68CZ2 1445 aa13.7□□□□□ -0.22
VPS26B-207ENST00000532160 DHX57Q6P158 1386 aaKnown RBP13.7□□□□□ -0.22
VPS26B-207ENST00000532160 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
VPS26B-207ENST00000532160 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
VPS26B-207ENST00000532160 ABCA3Q99758 1704 aa13.69□□□□□ -0.22
VPS26B-207ENST00000532160 ACIN1Q9UKV3 1341 aaKnown RBP13.68□□□□□ -0.22
VPS26B-207ENST00000532160 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
VPS26B-207ENST00000532160 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
VPS26B-207ENST00000532160 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
VPS26B-207ENST00000532160 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
VPS26B-207ENST00000532160 PLCH1Q4KWH8 1693 aa13.67□□□□□ -0.22
VPS26B-207ENST00000532160 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
VPS26B-207ENST00000532160 CABLES1Q8TDN4 633 aa13.67□□□□□ -0.22
VPS26B-207ENST00000532160 SBNO1A3KN83 1393 aa13.66□□□□□ -0.22
VPS26B-207ENST00000532160 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
VPS26B-207ENST00000532160 NWD2Q9ULI1 1742 aa13.65□□□□□ -0.22
VPS26B-207ENST00000532160 PSME1Q06323 249 aa13.65□□□□□ -0.22
VPS26B-207ENST00000532160 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
VPS26B-207ENST00000532160 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
VPS26B-207ENST00000532160 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
VPS26B-207ENST00000532160 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
VPS26B-207ENST00000532160 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
VPS26B-207ENST00000532160 POGKQ9P215 609 aa13.64□□□□□ -0.23
VPS26B-207ENST00000532160 ANKARQ7Z5J8 1434 aa13.64□□□□□ -0.23
VPS26B-207ENST00000532160 ARHGEF10O15013 1369 aa13.63□□□□□ -0.23
VPS26B-207ENST00000532160 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
VPS26B-207ENST00000532160 ZEB1P37275 1124 aaPredicted RBP13.62□□□□□ -0.23
VPS26B-207ENST00000532160 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
VPS26B-207ENST00000532160 ALS2Q96Q42 1657 aa13.62□□□□□ -0.23
VPS26B-207ENST00000532160 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
VPS26B-207ENST00000532160 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
VPS26B-207ENST00000532160 VPS72Q15906 364 aa13.61□□□□□ -0.23
VPS26B-207ENST00000532160 CCDC125Q86Z20 511 aa13.61□□□□□ -0.23
VPS26B-207ENST00000532160 SEPT12Q8IYM1 358 aa13.61□□□□□ -0.23
VPS26B-207ENST00000532160 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
VPS26B-207ENST00000532160 TULP4Q9NRJ4 1543 aa13.6□□□□□ -0.23
VPS26B-207ENST00000532160 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
VPS26B-207ENST00000532160 BLMP54132 1417 aaPredicted RBP13.6□□□□□ -0.23
VPS26B-207ENST00000532160 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
VPS26B-207ENST00000532160 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms