RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
CHD7-211ENST00000532149 ZMYM3Q14202 1370 aa16.56■□□□□ 0.24
CHD7-211ENST00000532149 EVC2Q86UK5 1308 aa16.56■□□□□ 0.24
CHD7-211ENST00000532149 NEFLP07196 543 aa16.56■□□□□ 0.24
CHD7-211ENST00000532149 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
CHD7-211ENST00000532149 PNISRQ8TF01 805 aaKnown RBP16.56■□□□□ 0.24
CHD7-211ENST00000532149 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
CHD7-211ENST00000532149 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
CHD7-211ENST00000532149 FXR2P51116 673 aaKnown RBP eCLIP16.53■□□□□ 0.242e-7■■■■□ 20.2
CHD7-211ENST00000532149 FAM9BQ8IZU0 186 aa16.53■□□□□ 0.24
CHD7-211ENST00000532149 A2ML1A8K2U0 1454 aa16.53■□□□□ 0.24
CHD7-211ENST00000532149 SIRT1Q96EB6 747 aa16.52■□□□□ 0.24
CHD7-211ENST00000532149 NLRP1Q9C000 1473 aa16.52■□□□□ 0.23
CHD7-211ENST00000532149 QRICH2Q9H0J4 1663 aa16.52■□□□□ 0.23
CHD7-211ENST00000532149 DLC1Q96QB1 1528 aa16.51■□□□□ 0.23
CHD7-211ENST00000532149 PDE3BQ13370 1112 aa16.5■□□□□ 0.23
CHD7-211ENST00000532149 NGEFQ8N5V2 710 aa16.5■□□□□ 0.23
CHD7-211ENST00000532149 TNRQ92752 1358 aa16.5■□□□□ 0.23
CHD7-211ENST00000532149 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
CHD7-211ENST00000532149 FBXO31Q5XUX0 539 aaPredicted RBP16.49■□□□□ 0.23
CHD7-211ENST00000532149 ARHGEF28Q8N1W1 1705 aaKnown RBP16.49■□□□□ 0.23
CHD7-211ENST00000532149 TRAK1Q9UPV9 953 aa16.49■□□□□ 0.23
CHD7-211ENST00000532149 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
CHD7-211ENST00000532149 MYOM1P52179 1685 aa16.49■□□□□ 0.23
CHD7-211ENST00000532149 NSD2O96028 1365 aa16.49■□□□□ 0.23
CHD7-211ENST00000532149 RIMS2Q9UQ26 1411 aa16.48■□□□□ 0.23
CHD7-211ENST00000532149 SSUH2Q9Y2M2 353 aa16.48■□□□□ 0.23
CHD7-211ENST00000532149 ATAD2Q6PL18 1390 aa16.48■□□□□ 0.23
CHD7-211ENST00000532149 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
CHD7-211ENST00000532149 YTHDC2Q9H6S0 1430 aaKnown RBP16.47■□□□□ 0.23
CHD7-211ENST00000532149 CCDC184Q52MB2 194 aa16.47■□□□□ 0.23
CHD7-211ENST00000532149 USP32Q8NFA0 1604 aa16.47■□□□□ 0.23
CHD7-211ENST00000532149 ABCC11Q96J66 1382 aa16.46■□□□□ 0.23
CHD7-211ENST00000532149 MLECQ14165 292 aa16.43■□□□□ 0.22
CHD7-211ENST00000532149 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
CHD7-211ENST00000532149 SMG6Q86US8 1419 aaKnown RBP16.43■□□□□ 0.22
CHD7-211ENST00000532149 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
CHD7-211ENST00000532149 ANKRD36BQ8N2N9 1353 aa16.42■□□□□ 0.22
CHD7-211ENST00000532149 CC2D1BQ5T0F9 858 aaKnown RBP16.42■□□□□ 0.22
CHD7-211ENST00000532149 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
CHD7-211ENST00000532149 POGKQ9P215 609 aa16.41■□□□□ 0.22
CHD7-211ENST00000532149 FAM135BQ49AJ0 1406 aa16.41■□□□□ 0.22
CHD7-211ENST00000532149 PTPRMP28827 1452 aa16.41■□□□□ 0.22
CHD7-211ENST00000532149 TMEM2Q9UHN6 1383 aa16.4■□□□□ 0.22
CHD7-211ENST00000532149 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
CHD7-211ENST00000532149 ZNF692Q9BU19 519 aaPredicted RBP16.4■□□□□ 0.22
CHD7-211ENST00000532149 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
CHD7-211ENST00000532149 TECPR2O15040 1411 aa16.38■□□□□ 0.21
CHD7-211ENST00000532149 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
CHD7-211ENST00000532149 EID1Q9Y6B2 187 aa16.38■□□□□ 0.21
CHD7-211ENST00000532149 KNDC1Q76NI1 1749 aa16.38■□□□□ 0.21
CHD7-211ENST00000532149 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
CHD7-211ENST00000532149 BLMP54132 1417 aaPredicted RBP16.37■□□□□ 0.21
CHD7-211ENST00000532149 NUDCQ9Y266 331 aa16.37■□□□□ 0.21
CHD7-211ENST00000532149 POLR3AO14802 1390 aaPredicted RBP16.37■□□□□ 0.21
CHD7-211ENST00000532149 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
CHD7-211ENST00000532149 THEMISQ8N1K5 641 aaPredicted RBP16.36■□□□□ 0.21
CHD7-211ENST00000532149 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
CHD7-211ENST00000532149 MED14O60244 1454 aa16.35■□□□□ 0.21
CHD7-211ENST00000532149 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
CHD7-211ENST00000532149 SLIT1O75093 1534 aa16.35■□□□□ 0.21
CHD7-211ENST00000532149 FER1L4A9Z1Z3 1794 aa16.34■□□□□ 0.21
CHD7-211ENST00000532149 HDGFL2Q7Z4V5 671 aaPredicted RBP16.34■□□□□ 0.21
CHD7-211ENST00000532149 PRAM1Q96QH2 718 aa16.34■□□□□ 0.21
CHD7-211ENST00000532149 NUTM2DQ5VT03 806 aaPredicted RBP16.33■□□□□ 0.2
CHD7-211ENST00000532149 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
CHD7-211ENST00000532149 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
CHD7-211ENST00000532149 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.2
CHD7-211ENST00000532149 DIP2AQ14689 1571 aa16.33■□□□□ 0.2
CHD7-211ENST00000532149 SRPK2P78362 688 aaKnown RBP16.32■□□□□ 0.2
CHD7-211ENST00000532149 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
CHD7-211ENST00000532149 C3P01024 1663 aa16.31■□□□□ 0.2
CHD7-211ENST00000532149 CPS1P31327 1500 aa16.31■□□□□ 0.2
CHD7-211ENST00000532149 ATP7BP35670 1465 aa16.31■□□□□ 0.2
CHD7-211ENST00000532149 ARHGAP23Q9P227 1491 aa16.31■□□□□ 0.2
CHD7-211ENST00000532149 FKBP8Q14318 412 aa16.31■□□□□ 0.2
CHD7-211ENST00000532149 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
CHD7-211ENST00000532149 SLC12A5Q9H2X9 1139 aa16.31■□□□□ 0.2
CHD7-211ENST00000532149 STK26Q9P289 416 aa16.31■□□□□ 0.2
CHD7-211ENST00000532149 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
CHD7-211ENST00000532149 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
CHD7-211ENST00000532149 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
CHD7-211ENST00000532149 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
CHD7-211ENST00000532149 TBX22Q9Y458 520 aa16.29■□□□□ 0.2
CHD7-211ENST00000532149 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
CHD7-211ENST00000532149 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
CHD7-211ENST00000532149 CDK19Q9BWU1 502 aa16.27■□□□□ 0.2
CHD7-211ENST00000532149 TXNDC2Q86VQ3 553 aa16.26■□□□□ 0.19
CHD7-211ENST00000532149 PNNQ9H307 717 aaKnown RBP16.26■□□□□ 0.19
CHD7-211ENST00000532149 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
CHD7-211ENST00000532149 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
CHD7-211ENST00000532149 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
CHD7-211ENST00000532149 CABP2Q9NPB3 220 aa16.25■□□□□ 0.19
CHD7-211ENST00000532149 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
CHD7-211ENST00000532149 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
CHD7-211ENST00000532149 ADGRB2O60241 1585 aa16.24■□□□□ 0.19
CHD7-211ENST00000532149 ANKRD26Q9UPS8 1709 aa16.24■□□□□ 0.19
CHD7-211ENST00000532149 ADAMTS13Q76LX8 1427 aa16.23■□□□□ 0.19
CHD7-211ENST00000532149 BCANQ96GW7 911 aa16.23■□□□□ 0.19
CHD7-211ENST00000532149 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms