RNA–Protein interactions for RNA: ENST00000531744.5

SDHD-212, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-212ENST00000531744 WAPLQ7Z5K2 1190 aa18.7■□□□□ 0.58
SDHD-212ENST00000531744 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
SDHD-212ENST00000531744 NUTM2BA6NNL0 878 aaPredicted RBP18.69■□□□□ 0.58
SDHD-212ENST00000531744 NUTM2EB1AL46 878 aaPredicted RBP18.69■□□□□ 0.58
SDHD-212ENST00000531744 NUTM2AQ8IVF1 878 aaPredicted RBP18.69■□□□□ 0.58
SDHD-212ENST00000531744 SOS2Q07890 1332 aaPredicted RBP18.69■□□□□ 0.58
SDHD-212ENST00000531744 MYOM2P54296 1465 aa18.68■□□□□ 0.58
SDHD-212ENST00000531744 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
SDHD-212ENST00000531744 YTHDC2Q9H6S0 1430 aaKnown RBP18.67■□□□□ 0.58
SDHD-212ENST00000531744 PXDNQ92626 1479 aa18.67■□□□□ 0.58
SDHD-212ENST00000531744 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
SDHD-212ENST00000531744 STK26Q9P289 416 aa18.67■□□□□ 0.58
SDHD-212ENST00000531744 MEX3CQ5U5Q3 659 aaKnown RBP18.65■□□□□ 0.58
SDHD-212ENST00000531744 C14orf93Q9H972 538 aaKnown RBP18.64■□□□□ 0.57
SDHD-212ENST00000531744 AFF2P51816 1311 aa18.64■□□□□ 0.57
SDHD-212ENST00000531744 ADGRB1O14514 1584 aa18.64■□□□□ 0.57
SDHD-212ENST00000531744 USP32Q8NFA0 1604 aa18.63■□□□□ 0.57
SDHD-212ENST00000531744 CFAP70Q5T0N1 1121 aa18.62■□□□□ 0.57
SDHD-212ENST00000531744 ZNF772Q68DY9 489 aaPredicted RBP18.61■□□□□ 0.57
SDHD-212ENST00000531744 KIF1AQ12756 1690 aa18.6■□□□□ 0.57
SDHD-212ENST00000531744 EP400Q96L91 3159 aa18.59■□□□□ 0.57
SDHD-212ENST00000531744 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
SDHD-212ENST00000531744 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.57
SDHD-212ENST00000531744 ESCO1Q5FWF5 840 aa18.58■□□□□ 0.56
SDHD-212ENST00000531744 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
SDHD-212ENST00000531744 ABCA3Q99758 1704 aa18.57■□□□□ 0.56
SDHD-212ENST00000531744 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
SDHD-212ENST00000531744 XPCQ01831 940 aaPredicted RBP18.57■□□□□ 0.56
SDHD-212ENST00000531744 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
SDHD-212ENST00000531744 C8orf37Q96NL8 207 aa18.57■□□□□ 0.56
SDHD-212ENST00000531744 RGS12O14924 1447 aa18.57■□□□□ 0.56
SDHD-212ENST00000531744 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
SDHD-212ENST00000531744 FOXO3O43524 673 aa18.56■□□□□ 0.56
SDHD-212ENST00000531744 ADAMTS2O95450 1211 aa18.56■□□□□ 0.56
SDHD-212ENST00000531744 ARHGEF28Q8N1W1 1705 aaKnown RBP18.56■□□□□ 0.56
SDHD-212ENST00000531744 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
SDHD-212ENST00000531744 RXRBP28702 533 aa18.54■□□□□ 0.56
SDHD-212ENST00000531744 TRPM3Q9HCF6 1732 aaPredicted RBP18.54■□□□□ 0.56
SDHD-212ENST00000531744 NPHP3Q7Z494 1330 aa18.53■□□□□ 0.56
SDHD-212ENST00000531744 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.52■□□□□ 0.56
SDHD-212ENST00000531744 UPF1Q92900 1129 aaKnown RBP eCLIP18.52■□□□□ 0.561e-6■□□□□ 9.2
SDHD-212ENST00000531744 HRCP23327 699 aa18.51■□□□□ 0.55
SDHD-212ENST00000531744 PRAM1Q96QH2 718 aa18.51■□□□□ 0.55
SDHD-212ENST00000531744 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
SDHD-212ENST00000531744 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
SDHD-212ENST00000531744 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
SDHD-212ENST00000531744 BCL9LQ86UU0 1499 aa18.5■□□□□ 0.55
SDHD-212ENST00000531744 ATRNO75882 1429 aa18.49■□□□□ 0.55
SDHD-212ENST00000531744 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
SDHD-212ENST00000531744 CRYBG1Q9Y4K1 1723 aa18.49■□□□□ 0.55
SDHD-212ENST00000531744 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
SDHD-212ENST00000531744 ALS2Q96Q42 1657 aa18.48■□□□□ 0.55
SDHD-212ENST00000531744 BRWD3Q6RI45 1802 aa18.48■□□□□ 0.55
SDHD-212ENST00000531744 KIAA1210Q9ULL0 1709 aa18.47■□□□□ 0.55
SDHD-212ENST00000531744 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
SDHD-212ENST00000531744 DCAF11Q8TEB1 546 aa18.47■□□□□ 0.55
SDHD-212ENST00000531744 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
SDHD-212ENST00000531744 PLCH1Q4KWH8 1693 aa18.47■□□□□ 0.55
SDHD-212ENST00000531744 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
SDHD-212ENST00000531744 USP21Q9UK80 565 aa18.45■□□□□ 0.54
SDHD-212ENST00000531744 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
SDHD-212ENST00000531744 GLI3P10071 1580 aa18.45■□□□□ 0.54
SDHD-212ENST00000531744 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
SDHD-212ENST00000531744 PHF8Q9UPP1 1060 aa18.44■□□□□ 0.54
SDHD-212ENST00000531744 SLIT2O94813 1529 aa18.44■□□□□ 0.54
SDHD-212ENST00000531744 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
SDHD-212ENST00000531744 ANKARQ7Z5J8 1434 aa18.43■□□□□ 0.54
SDHD-212ENST00000531744 HIRIP3Q9BW71 556 aaPredicted RBP18.42■□□□□ 0.54
SDHD-212ENST00000531744 NWD2Q9ULI1 1742 aa18.42■□□□□ 0.54
SDHD-212ENST00000531744 TULP4Q9NRJ4 1543 aa18.42■□□□□ 0.54
SDHD-212ENST00000531744 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
SDHD-212ENST00000531744 ITSN1Q15811 1721 aa18.41■□□□□ 0.54
SDHD-212ENST00000531744 NRAPQ86VF7 1730 aa18.41■□□□□ 0.54
SDHD-212ENST00000531744 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
SDHD-212ENST00000531744 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
SDHD-212ENST00000531744 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
SDHD-212ENST00000531744 SBNO1A3KN83 1393 aa18.4■□□□□ 0.54
SDHD-212ENST00000531744 POGKQ9P215 609 aa18.39■□□□□ 0.53
SDHD-212ENST00000531744 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
SDHD-212ENST00000531744 SRCAPQ6ZRS2 3230 aa18.39■□□□□ 0.53
SDHD-212ENST00000531744 ATP7BP35670 1465 aa18.38■□□□□ 0.53
SDHD-212ENST00000531744 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
SDHD-212ENST00000531744 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
SDHD-212ENST00000531744 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
SDHD-212ENST00000531744 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
SDHD-212ENST00000531744 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
SDHD-212ENST00000531744 PHRF1Q9P1Y6 1649 aaKnown RBP18.33■□□□□ 0.52
SDHD-212ENST00000531744 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
SDHD-212ENST00000531744 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
SDHD-212ENST00000531744 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
SDHD-212ENST00000531744 PSME1Q06323 249 aa18.31■□□□□ 0.52
SDHD-212ENST00000531744 COL14A1Q05707 1796 aaKnown RBP18.31■□□□□ 0.52
SDHD-212ENST00000531744 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
SDHD-212ENST00000531744 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
SDHD-212ENST00000531744 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
SDHD-212ENST00000531744 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
SDHD-212ENST00000531744 EIF3AQ14152 1382 aaKnown RBP18.28■□□□□ 0.52
SDHD-212ENST00000531744 LMOD2Q6P5Q4 547 aa18.27■□□□□ 0.52
SDHD-212ENST00000531744 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.52
SDHD-212ENST00000531744 CDK19Q9BWU1 502 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms