RNA–Protein interactions for RNA: ENST00000531556.1

AP004247.1-201, humanhuman

BASIC

Gene AP004247.1, Length 1,289 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.1-201ENST00000531556 BRICD5Q6PL45 260 aa10.09□□□□□ -0.79
AP004247.1-201ENST00000531556 METTL3Q86U44 580 aaKnown RBP10.09□□□□□ -0.79
AP004247.1-201ENST00000531556 MRGPRX2Q96LB1 330 aa10.09□□□□□ -0.79
AP004247.1-201ENST00000531556 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
AP004247.1-201ENST00000531556 SLC27A5Q9Y2P5 690 aa10.09□□□□□ -0.79
AP004247.1-201ENST00000531556 IRF7Q92985 503 aa10.08□□□□□ -0.8
AP004247.1-201ENST00000531556 DAXXQ9UER7 740 aaPredicted RBP10.08□□□□□ -0.8
AP004247.1-201ENST00000531556 J3QL48 77 aa10.07□□□□□ -0.8
AP004247.1-201ENST00000531556 PRDM9Q9NQV7 894 aa10.07□□□□□ -0.8
AP004247.1-201ENST00000531556 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
AP004247.1-201ENST00000531556 SULF1Q8IWU6 871 aa10.05□□□□□ -0.8
AP004247.1-201ENST00000531556 HPS1Q92902 700 aa10.05□□□□□ -0.8
AP004247.1-201ENST00000531556 FECHP22830 423 aa10.04□□□□□ -0.8
AP004247.1-201ENST00000531556 GMPRP36959 345 aa10.04□□□□□ -0.8
AP004247.1-201ENST00000531556 HIC1Q14526 733 aa10.04□□□□□ -0.8
AP004247.1-201ENST00000531556 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
AP004247.1-201ENST00000531556 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
AP004247.1-201ENST00000531556 GCGRP47871 477 aa10.03□□□□□ -0.8
AP004247.1-201ENST00000531556 Q3C1V9 767 aa10.03□□□□□ -0.8
AP004247.1-201ENST00000531556 DDX11L8A8MPP1 907 aa10.02□□□□□ -0.81
AP004247.1-201ENST00000531556 MMP16P51512 607 aa10.01□□□□□ -0.81
AP004247.1-201ENST00000531556 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
AP004247.1-201ENST00000531556 WNT7BP56706 349 aa9.99□□□□□ -0.81
AP004247.1-201ENST00000531556 H3BM21 787 aa9.97□□□□□ -0.81
AP004247.1-201ENST00000531556 RC3H1Q5TC82 1133 aaKnown RBP9.97□□□□□ -0.81
AP004247.1-201ENST00000531556 RNF19BQ6ZMZ0 732 aa9.97□□□□□ -0.81
AP004247.1-201ENST00000531556 SUZ12Q15022 739 aaKnown RBP9.96□□□□□ -0.82
AP004247.1-201ENST00000531556 KCNV2Q8TDN2 545 aa9.96□□□□□ -0.82
AP004247.1-201ENST00000531556 DXOO77932 396 aaKnown RBP9.94□□□□□ -0.82
AP004247.1-201ENST00000531556 ALDH1A1P00352 501 aa9.94□□□□□ -0.82
AP004247.1-201ENST00000531556 USB1Q9BQ65 265 aaKnown RBP9.92□□□□□ -0.82
AP004247.1-201ENST00000531556 GNPATO15228 680 aa9.91□□□□□ -0.82
AP004247.1-201ENST00000531556 CAPN5O15484 640 aaPredicted RBP9.9□□□□□ -0.82
AP004247.1-201ENST00000531556 SKOR1P84550 965 aa9.89□□□□□ -0.83
AP004247.1-201ENST00000531556 TRIM46Q7Z4K8 759 aa9.89□□□□□ -0.83
AP004247.1-201ENST00000531556 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
AP004247.1-201ENST00000531556 ERBB4Q15303 1308 aa9.88□□□□□ -0.83
AP004247.1-201ENST00000531556 BMP1P13497 986 aa9.88□□□□□ -0.83
AP004247.1-201ENST00000531556 VEGFBP49765 207 aa9.88□□□□□ -0.83
AP004247.1-201ENST00000531556 P3H3Q8IVL6 736 aa9.88□□□□□ -0.83
AP004247.1-201ENST00000531556 WASF2Q9Y6W5 498 aa9.88□□□□□ -0.83
AP004247.1-201ENST00000531556 KCNMA1Q12791 1236 aa9.84□□□□□ -0.83
AP004247.1-201ENST00000531556 SMYD5Q6GMV2 418 aa9.84□□□□□ -0.83
AP004247.1-201ENST00000531556 EHBP1Q8NDI1 1231 aa9.84□□□□□ -0.83
AP004247.1-201ENST00000531556 SEMA3EO15041 775 aa9.83□□□□□ -0.84
AP004247.1-201ENST00000531556 SIAH2O43255 324 aa9.83□□□□□ -0.84
AP004247.1-201ENST00000531556 VSIG8P0DPA2 414 aa9.82□□□□□ -0.84
AP004247.1-201ENST00000531556 USP46P62068 366 aa9.82□□□□□ -0.84
AP004247.1-201ENST00000531556 NLRP7Q8WX94 980 aa9.82□□□□□ -0.84
AP004247.1-201ENST00000531556 KDM4AO75164 1064 aa9.81□□□□□ -0.84
AP004247.1-201ENST00000531556 ZFP42Q96MM3 310 aa9.81□□□□□ -0.84
AP004247.1-201ENST00000531556 CD46P15529 392 aa9.78□□□□□ -0.84
AP004247.1-201ENST00000531556 JUNDP17535 347 aa9.78□□□□□ -0.84
AP004247.1-201ENST00000531556 SCARF1Q14162 830 aa9.78□□□□□ -0.84
AP004247.1-201ENST00000531556 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
AP004247.1-201ENST00000531556 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
AP004247.1-201ENST00000531556 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.85
AP004247.1-201ENST00000531556 TMEM151AQ8N4L1 468 aa9.77□□□□□ -0.85
AP004247.1-201ENST00000531556 RNF225M0QZC1 329 aaPredicted RBP9.75□□□□□ -0.85
AP004247.1-201ENST00000531556 GPR37O15354 613 aa9.75□□□□□ -0.85
AP004247.1-201ENST00000531556 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
AP004247.1-201ENST00000531556 MRPL14Q6P1L8 145 aaKnown RBP9.74□□□□□ -0.85
AP004247.1-201ENST00000531556 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
AP004247.1-201ENST00000531556 TESPA1A2RU30 521 aaPredicted RBP9.72□□□□□ -0.85
AP004247.1-201ENST00000531556 GSK3AP49840 483 aa9.72□□□□□ -0.85
AP004247.1-201ENST00000531556 GDF11O95390 407 aa9.71□□□□□ -0.86
AP004247.1-201ENST00000531556 MPNDQ8N594 471 aa9.71□□□□□ -0.86
AP004247.1-201ENST00000531556 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.86
AP004247.1-201ENST00000531556 HOXA2O43364 376 aa9.7□□□□□ -0.86
AP004247.1-201ENST00000531556 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
AP004247.1-201ENST00000531556 SH3BP2P78314 561 aa9.69□□□□□ -0.86
AP004247.1-201ENST00000531556 RASSF7Q02833 373 aa9.69□□□□□ -0.86
AP004247.1-201ENST00000531556 PTCRAQ6ISU1 281 aaPredicted RBP9.69□□□□□ -0.86
AP004247.1-201ENST00000531556 RETREG3Q86VR2 466 aa9.69□□□□□ -0.86
AP004247.1-201ENST00000531556 PURBQ96QR8 312 aaKnown RBP9.69□□□□□ -0.86
AP004247.1-201ENST00000531556 ADH1CP00326 375 aa9.68□□□□□ -0.86
AP004247.1-201ENST00000531556 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
AP004247.1-201ENST00000531556 NNTQ13423 1086 aa9.68□□□□□ -0.86
AP004247.1-201ENST00000531556 CCNYL3P0C7X3 344 aa9.67□□□□□ -0.86
AP004247.1-201ENST00000531556 VARSP26640 1264 aaKnown RBP9.67□□□□□ -0.86
AP004247.1-201ENST00000531556 HLA-CQ95604 372 aa9.66□□□□□ -0.86
AP004247.1-201ENST00000531556 MAN1A2O60476 641 aa9.65□□□□□ -0.86
AP004247.1-201ENST00000531556 MS4A1P11836 297 aa9.64□□□□□ -0.87
AP004247.1-201ENST00000531556 TIMP2P16035 220 aa9.64□□□□□ -0.87
AP004247.1-201ENST00000531556 WDR4P57081 412 aaKnown RBP9.64□□□□□ -0.87
AP004247.1-201ENST00000531556 TLL2Q9Y6L7 1015 aa9.64□□□□□ -0.87
AP004247.1-201ENST00000531556 IGHA1P01876 353 aa9.63□□□□□ -0.87
AP004247.1-201ENST00000531556 SOBPA7XYQ1 873 aa9.62□□□□□ -0.87
AP004247.1-201ENST00000531556 PPFIA3O75145 1194 aa9.62□□□□□ -0.87
AP004247.1-201ENST00000531556 PTPRNQ16849 979 aa9.61□□□□□ -0.87
AP004247.1-201ENST00000531556 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
AP004247.1-201ENST00000531556 UNC93B1Q9H1C4 597 aa9.61□□□□□ -0.87
AP004247.1-201ENST00000531556 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
AP004247.1-201ENST00000531556 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
AP004247.1-201ENST00000531556 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
AP004247.1-201ENST00000531556 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
AP004247.1-201ENST00000531556 UPP2O95045 317 aa9.59□□□□□ -0.87
AP004247.1-201ENST00000531556 GUCA2AQ02747 115 aa9.59□□□□□ -0.87
AP004247.1-201ENST00000531556 NUTM1Q86Y26 1132 aa9.59□□□□□ -0.87
AP004247.1-201ENST00000531556 BAP1Q92560 729 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms