RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 FAM135BQ49AJ0 1406 aa16.74■□□□□ 0.27
ACER3-210ENST00000531352 CADPS2Q86UW7 1296 aa16.73■□□□□ 0.27
ACER3-210ENST00000531352 DLC1Q96QB1 1528 aa16.73■□□□□ 0.27
ACER3-210ENST00000531352 ARHGEF28Q8N1W1 1705 aaKnown RBP16.72■□□□□ 0.27
ACER3-210ENST00000531352 DCCP43146 1447 aa16.71■□□□□ 0.27
ACER3-210ENST00000531352 POGKQ9P215 609 aa16.71■□□□□ 0.27
ACER3-210ENST00000531352 MST1RQ04912 1400 aa16.7■□□□□ 0.26
ACER3-210ENST00000531352 ROCK2O75116 1388 aaKnown RBP16.69■□□□□ 0.26
ACER3-210ENST00000531352 ROBO1Q9Y6N7 1651 aa16.69■□□□□ 0.26
ACER3-210ENST00000531352 HIRIP3Q9BW71 556 aaPredicted RBP16.69■□□□□ 0.26
ACER3-210ENST00000531352 NUTM2FA1L443 756 aa16.68■□□□□ 0.26
ACER3-210ENST00000531352 HSPA1LP34931 641 aa16.68■□□□□ 0.26
ACER3-210ENST00000531352 TIMELESSQ9UNS1 1208 aa16.67■□□□□ 0.26
ACER3-210ENST00000531352 MINK1Q8N4C8 1332 aaPredicted RBP16.67■□□□□ 0.26
ACER3-210ENST00000531352 GPRASP1Q5JY77 1395 aa16.67■□□□□ 0.26
ACER3-210ENST00000531352 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
ACER3-210ENST00000531352 BRINP3Q76B58 766 aa16.66■□□□□ 0.26
ACER3-210ENST00000531352 RALGAPBQ86X10 1494 aa16.66■□□□□ 0.26
ACER3-210ENST00000531352 ORAI2Q96SN7 254 aa16.65■□□□□ 0.26
ACER3-210ENST00000531352 C1orf167Q5SNV9 1468 aa16.65■□□□□ 0.26
ACER3-210ENST00000531352 RGPD8O14715 1765 aaPredicted RBP16.64■□□□□ 0.26
ACER3-210ENST00000531352 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
ACER3-210ENST00000531352 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
ACER3-210ENST00000531352 FMN2Q9NZ56 1722 aa16.63■□□□□ 0.25
ACER3-210ENST00000531352 CENPJQ9HC77 1338 aaPredicted RBP16.61■□□□□ 0.25
ACER3-210ENST00000531352 ADGRB2O60241 1585 aa16.61■□□□□ 0.25
ACER3-210ENST00000531352 WASLO00401 505 aaPredicted RBP16.6■□□□□ 0.25
ACER3-210ENST00000531352 ESCO1Q5FWF5 840 aa16.6■□□□□ 0.25
ACER3-210ENST00000531352 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
ACER3-210ENST00000531352 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
ACER3-210ENST00000531352 PRR36Q9H6K5 1346 aa16.59■□□□□ 0.25
ACER3-210ENST00000531352 PHLPP1O60346 1717 aa16.57■□□□□ 0.24
ACER3-210ENST00000531352 CDK19Q9BWU1 502 aa16.57■□□□□ 0.24
ACER3-210ENST00000531352 NHSL1Q5SYE7 1610 aa16.56■□□□□ 0.24
ACER3-210ENST00000531352 AHDC1Q5TGY3 1603 aaPredicted RBP16.55■□□□□ 0.24
ACER3-210ENST00000531352 FOXO3O43524 673 aa16.55■□□□□ 0.24
ACER3-210ENST00000531352 COL16A1Q07092 1604 aaPredicted RBP16.55■□□□□ 0.24
ACER3-210ENST00000531352 TULP4Q9NRJ4 1543 aa16.54■□□□□ 0.24
ACER3-210ENST00000531352 ST20-MTHFSA0A0A6YYL1 179 aa16.54■□□□□ 0.24
ACER3-210ENST00000531352 PMFBP1Q8TBY8 1022 aa16.54■□□□□ 0.24
ACER3-210ENST00000531352 EIF3AQ14152 1382 aaKnown RBP16.53■□□□□ 0.24
ACER3-210ENST00000531352 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
ACER3-210ENST00000531352 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
ACER3-210ENST00000531352 CABP2Q9NPB3 220 aa16.53■□□□□ 0.24
ACER3-210ENST00000531352 ATP7BP35670 1465 aa16.52■□□□□ 0.24
ACER3-210ENST00000531352 PHF8Q9UPP1 1060 aa16.52■□□□□ 0.23
ACER3-210ENST00000531352 ANKARQ7Z5J8 1434 aa16.52■□□□□ 0.23
ACER3-210ENST00000531352 USP47Q96K76 1375 aa16.51■□□□□ 0.23
ACER3-210ENST00000531352 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
ACER3-210ENST00000531352 TESK2Q96S53 571 aa16.5■□□□□ 0.23
ACER3-210ENST00000531352 SOS2Q07890 1332 aaPredicted RBP16.5■□□□□ 0.23
ACER3-210ENST00000531352 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
ACER3-210ENST00000531352 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
ACER3-210ENST00000531352 PXDNQ92626 1479 aa16.48■□□□□ 0.23
ACER3-210ENST00000531352 CCDC61Q9Y6R9 512 aa16.48■□□□□ 0.23
ACER3-210ENST00000531352 EVC2Q86UK5 1308 aa16.48■□□□□ 0.23
ACER3-210ENST00000531352 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
ACER3-210ENST00000531352 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
ACER3-210ENST00000531352 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
ACER3-210ENST00000531352 ITSN1Q15811 1721 aa16.46■□□□□ 0.23
ACER3-210ENST00000531352 KRT28Q7Z3Y7 464 aa16.46■□□□□ 0.22
ACER3-210ENST00000531352 JCADQ9P266 1359 aa16.45■□□□□ 0.22
ACER3-210ENST00000531352 CABP1Q9NZU7 370 aa16.44■□□□□ 0.22
ACER3-210ENST00000531352 PSME1Q06323 249 aa16.44■□□□□ 0.22
ACER3-210ENST00000531352 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
ACER3-210ENST00000531352 ACEP12821 1306 aa16.43■□□□□ 0.22
ACER3-210ENST00000531352 PLEKHG3A1L390 1219 aa16.43■□□□□ 0.22
ACER3-210ENST00000531352 NGDNQ8NEJ9 315 aaKnown RBP16.43■□□□□ 0.22
ACER3-210ENST00000531352 SHPRHQ149N8 1683 aa16.43■□□□□ 0.22
ACER3-210ENST00000531352 DISP3Q9P2K9 1392 aa16.42■□□□□ 0.22
ACER3-210ENST00000531352 HSPA5P11021 654 aaKnown RBP16.42■□□□□ 0.22
ACER3-210ENST00000531352 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
ACER3-210ENST00000531352 SPATA31A3Q5VYP0 1347 aa16.41■□□□□ 0.22
ACER3-210ENST00000531352 POLR3AO14802 1390 aaPredicted RBP16.4■□□□□ 0.22
ACER3-210ENST00000531352 TRPM3Q9HCF6 1732 aaPredicted RBP16.4■□□□□ 0.22
ACER3-210ENST00000531352 EIF4G2P78344 907 aaKnown RBP eCLIP16.39■□□□□ 0.21
ACER3-210ENST00000531352 LRP6O75581 1613 aa16.39■□□□□ 0.21
ACER3-210ENST00000531352 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
ACER3-210ENST00000531352 SLC12A5Q9H2X9 1139 aa16.38■□□□□ 0.21
ACER3-210ENST00000531352 NUTM2BA6NNL0 878 aaPredicted RBP16.38■□□□□ 0.21
ACER3-210ENST00000531352 NUTM2EB1AL46 878 aaPredicted RBP16.38■□□□□ 0.21
ACER3-210ENST00000531352 NUTM2AQ8IVF1 878 aaPredicted RBP16.38■□□□□ 0.21
ACER3-210ENST00000531352 ATAD2Q6PL18 1390 aa16.38■□□□□ 0.21
ACER3-210ENST00000531352 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
ACER3-210ENST00000531352 TMF1P82094 1093 aa16.37■□□□□ 0.21
ACER3-210ENST00000531352 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
ACER3-210ENST00000531352 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
ACER3-210ENST00000531352 LMOD2Q6P5Q4 547 aa16.36■□□□□ 0.21
ACER3-210ENST00000531352 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
ACER3-210ENST00000531352 C11orf95C9JLR9 678 aaPredicted RBP16.36■□□□□ 0.21
ACER3-210ENST00000531352 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
ACER3-210ENST00000531352 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
ACER3-210ENST00000531352 ALS2Q96Q42 1657 aa16.36■□□□□ 0.21
ACER3-210ENST00000531352 CABLES1Q8TDN4 633 aa16.35■□□□□ 0.21
ACER3-210ENST00000531352 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
ACER3-210ENST00000531352 COL22A1Q8NFW1 1626 aaPredicted RBP16.35■□□□□ 0.21
ACER3-210ENST00000531352 CD163L1Q9NR16 1453 aa16.34■□□□□ 0.21
ACER3-210ENST00000531352 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
ACER3-210ENST00000531352 AKAP12Q02952 1782 aa16.34■□□□□ 0.21
ACER3-210ENST00000531352 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms