RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 TRPC5Q9UL62 973 aaPredicted RBP31.84■■■□□ 2.69
CHKA-206ENST00000531341 FOXD1Q16676 465 aa31.83■■■□□ 2.69
CHKA-206ENST00000531341 ESCO1Q5FWF5 840 aa31.83■■■□□ 2.69
CHKA-206ENST00000531341 XPCQ01831 940 aaPredicted RBP31.8■■■□□ 2.68
CHKA-206ENST00000531341 PPLO60437 1756 aa31.8■■■□□ 2.68
CHKA-206ENST00000531341 ATRNO75882 1429 aa31.8■■■□□ 2.68
CHKA-206ENST00000531341 ATAD2Q6PL18 1390 aa31.8■■■□□ 2.68
CHKA-206ENST00000531341 COL22A1Q8NFW1 1626 aaPredicted RBP31.79■■■□□ 2.68
CHKA-206ENST00000531341 MYOM2P54296 1465 aa31.78■■■□□ 2.68
CHKA-206ENST00000531341 ADGRF5Q8IZF2 1346 aa31.78■■■□□ 2.68
CHKA-206ENST00000531341 FOXO3O43524 673 aa31.77■■■□□ 2.68
CHKA-206ENST00000531341 WAPLQ7Z5K2 1190 aa31.77■■■□□ 2.68
CHKA-206ENST00000531341 PXDNQ92626 1479 aa31.77■■■□□ 2.68
CHKA-206ENST00000531341 NPHP3Q7Z494 1330 aa31.76■■■□□ 2.68
CHKA-206ENST00000531341 NUTM2FA1L443 756 aa31.76■■■□□ 2.67
CHKA-206ENST00000531341 STK26Q9P289 416 aa31.75■■■□□ 2.67
CHKA-206ENST00000531341 BCL9LQ86UU0 1499 aa31.75■■■□□ 2.67
CHKA-206ENST00000531341 CDC42BPGQ6DT37 1551 aa31.73■■■□□ 2.67
CHKA-206ENST00000531341 RGL3Q3MIN7 710 aa31.71■■■□□ 2.67
CHKA-206ENST00000531341 PLEKHH1Q9ULM0 1364 aa31.69■■■□□ 2.66
CHKA-206ENST00000531341 TMEM132EQ6IEE7 984 aa31.69■■■□□ 2.66
CHKA-206ENST00000531341 GJD4Q96KN9 370 aaPredicted RBP31.66■■■□□ 2.66
CHKA-206ENST00000531341 LRPPRCP42704 1394 aaKnown RBP31.65■■■□□ 2.66
CHKA-206ENST00000531341 TECPR2O15040 1411 aa31.65■■■□□ 2.66
CHKA-206ENST00000531341 SPATA31E1Q6ZUB1 1445 aa31.64■■■□□ 2.66
CHKA-206ENST00000531341 MARF1Q9Y4F3 1742 aaKnown RBP31.61■■■□□ 2.65
CHKA-206ENST00000531341 ABCC11Q96J66 1382 aa31.61■■■□□ 2.65
CHKA-206ENST00000531341 CCDC144AA2RUR9 1427 aa31.6■■■□□ 2.65
CHKA-206ENST00000531341 SPATA31A3Q5VYP0 1347 aa31.59■■■□□ 2.65
CHKA-206ENST00000531341 ZRANB1Q9UGI0 708 aa31.59■■■□□ 2.65
CHKA-206ENST00000531341 MPHOSPH9Q99550 1183 aa31.57■■■□□ 2.64
CHKA-206ENST00000531341 ANKRD30BQ9BXX2 1392 aa31.56■■■□□ 2.64
CHKA-206ENST00000531341 UNC5CLQ8IV45 518 aa31.56■■■□□ 2.64
CHKA-206ENST00000531341 IFT172Q9UG01 1749 aa31.55■■■□□ 2.64
CHKA-206ENST00000531341 KRT28Q7Z3Y7 464 aa31.55■■■□□ 2.64
CHKA-206ENST00000531341 CCDC125Q86Z20 511 aa31.55■■■□□ 2.64
CHKA-206ENST00000531341 PIK3C2GO75747 1445 aa31.55■■■□□ 2.64
CHKA-206ENST00000531341 SLIT2O94813 1529 aa31.54■■■□□ 2.64
CHKA-206ENST00000531341 GLI3P10071 1580 aa31.54■■■□□ 2.64
CHKA-206ENST00000531341 RALGAPBQ86X10 1494 aa31.53■■■□□ 2.64
CHKA-206ENST00000531341 FMN2Q9NZ56 1722 aa31.53■■■□□ 2.64
CHKA-206ENST00000531341 YTHDC2Q9H6S0 1430 aaKnown RBP31.53■■■□□ 2.64
CHKA-206ENST00000531341 KNDC1Q76NI1 1749 aa31.52■■■□□ 2.64
CHKA-206ENST00000531341 CABLES1Q8TDN4 633 aa31.5■■■□□ 2.63
CHKA-206ENST00000531341 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.49■■■□□ 2.63
CHKA-206ENST00000531341 PLEKHG5O94827 1062 aa31.48■■■□□ 2.63
CHKA-206ENST00000531341 SIRT1Q96EB6 747 aa31.46■■■□□ 2.63
CHKA-206ENST00000531341 PHF8Q9UPP1 1060 aa31.46■■■□□ 2.63
CHKA-206ENST00000531341 KIF1AQ12756 1690 aa31.45■■■□□ 2.63
CHKA-206ENST00000531341 C14orf93Q9H972 538 aaKnown RBP31.45■■■□□ 2.63
CHKA-206ENST00000531341 USP32Q8NFA0 1604 aa31.45■■■□□ 2.62
CHKA-206ENST00000531341 CFAP70Q5T0N1 1121 aa31.44■■■□□ 2.62
CHKA-206ENST00000531341 DEFB132Q7Z7B7 95 aa31.44■■■□□ 2.62
CHKA-206ENST00000531341 TNS3Q68CZ2 1445 aa31.42■■■□□ 2.62
CHKA-206ENST00000531341 SEPT12Q8IYM1 358 aa31.42■■■□□ 2.62
CHKA-206ENST00000531341 RGPD8O14715 1765 aaPredicted RBP31.42■■■□□ 2.62
CHKA-206ENST00000531341 BLMP54132 1417 aaPredicted RBP31.41■■■□□ 2.62
CHKA-206ENST00000531341 SAFB2Q14151 953 aaKnown RBP eCLIP31.41■■■□□ 2.62
CHKA-206ENST00000531341 BRWD3Q6RI45 1802 aa31.4■■■□□ 2.62
CHKA-206ENST00000531341 HAP1P54257 671 aaPredicted RBP31.39■■■□□ 2.62
CHKA-206ENST00000531341 PSME1Q06323 249 aa31.39■■■□□ 2.62
CHKA-206ENST00000531341 VPS72Q15906 364 aa31.39■■■□□ 2.62
CHKA-206ENST00000531341 PRAM1Q96QH2 718 aa31.38■■■□□ 2.61
CHKA-206ENST00000531341 LMOD2Q6P5Q4 547 aa31.37■■■□□ 2.61
CHKA-206ENST00000531341 NRXN1Q9ULB1 1477 aa31.37■■■□□ 2.61
CHKA-206ENST00000531341 DHX57Q6P158 1386 aaKnown RBP31.36■■■□□ 2.61
CHKA-206ENST00000531341 PMFBP1Q8TBY8 1022 aa31.36■■■□□ 2.61
CHKA-206ENST00000531341 ONECUT3O60422 494 aaPredicted RBP31.35■■■□□ 2.61
CHKA-206ENST00000531341 SBNO1A3KN83 1393 aa31.34■■■□□ 2.61
CHKA-206ENST00000531341 FAM83GA6ND36 823 aa31.34■■■□□ 2.61
CHKA-206ENST00000531341 CCDC9Q9Y3X0 531 aaKnown RBP31.33■■■□□ 2.61
CHKA-206ENST00000531341 PLCH1Q4KWH8 1693 aa31.32■■■□□ 2.6
CHKA-206ENST00000531341 KRT27Q7Z3Y8 459 aa31.29■■■□□ 2.6
CHKA-206ENST00000531341 ABCA3Q99758 1704 aa31.29■■■□□ 2.6
CHKA-206ENST00000531341 ARHGEF10O15013 1369 aa31.28■■■□□ 2.6
CHKA-206ENST00000531341 SF3B2Q13435 895 aaKnown RBP31.27■■■□□ 2.6
CHKA-206ENST00000531341 NWD2Q9ULI1 1742 aa31.27■■■□□ 2.6
CHKA-206ENST00000531341 POGKQ9P215 609 aa31.26■■■□□ 2.59
CHKA-206ENST00000531341 HIRIP3Q9BW71 556 aaPredicted RBP31.25■■■□□ 2.59
CHKA-206ENST00000531341 FAM98CQ17RN3 349 aaKnown RBP31.22■■■□□ 2.59
CHKA-206ENST00000531341 BTG4Q9NY30 223 aa31.22■■■□□ 2.59
CHKA-206ENST00000531341 TRAK1Q9UPV9 953 aa31.22■■■□□ 2.59
CHKA-206ENST00000531341 DLC1Q96QB1 1528 aa31.22■■■□□ 2.59
CHKA-206ENST00000531341 ANKARQ7Z5J8 1434 aa31.22■■■□□ 2.59
CHKA-206ENST00000531341 PRR36Q9H6K5 1346 aa31.21■■■□□ 2.59
CHKA-206ENST00000531341 ADGRB1O14514 1584 aa31.19■■■□□ 2.58
CHKA-206ENST00000531341 A0A0G2JS52 829 aa31.19■■■□□ 2.58
CHKA-206ENST00000531341 MYT1Q01538 1121 aa31.19■■■□□ 2.58
CHKA-206ENST00000531341 TRPM3Q9HCF6 1732 aaPredicted RBP31.18■■■□□ 2.58
CHKA-206ENST00000531341 MINK1Q8N4C8 1332 aaPredicted RBP31.18■■■□□ 2.58
CHKA-206ENST00000531341 NRAPQ86VF7 1730 aa31.18■■■□□ 2.58
CHKA-206ENST00000531341 ADGRB2O60241 1585 aa31.17■■■□□ 2.58
CHKA-206ENST00000531341 PSDA5PKW4 1024 aaPredicted RBP31.16■■■□□ 2.58
CHKA-206ENST00000531341 FAM182BQ5T319 152 aa31.16■■■□□ 2.58
CHKA-206ENST00000531341 ACIN1Q9UKV3 1341 aaKnown RBP31.15■■■□□ 2.58
CHKA-206ENST00000531341 ALS2Q96Q42 1657 aa31.13■■■□□ 2.57
CHKA-206ENST00000531341 KDM2AQ9Y2K7 1162 aa31.12■■■□□ 2.57
CHKA-206ENST00000531341 WASLO00401 505 aaPredicted RBP31.11■■■□□ 2.57
CHKA-206ENST00000531341 BAG6P46379 1132 aa31.11■■■□□ 2.57
CHKA-206ENST00000531341 GPRASP1Q5JY77 1395 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms