RNA–Protein interactions for RNA: ENST00000531146.1

VPS51-210, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 594 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-210ENST00000531146 ADAMTS2O95450 1211 aa17.85■□□□□ 0.45
VPS51-210ENST00000531146 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
VPS51-210ENST00000531146 WAPLQ7Z5K2 1190 aa17.85■□□□□ 0.45
VPS51-210ENST00000531146 ANKRD30BQ9BXX2 1392 aa17.85■□□□□ 0.45
VPS51-210ENST00000531146 CDK12Q9NYV4 1490 aaPredicted RBP17.84■□□□□ 0.45
VPS51-210ENST00000531146 TECPR2O15040 1411 aa17.84■□□□□ 0.45
VPS51-210ENST00000531146 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
VPS51-210ENST00000531146 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
VPS51-210ENST00000531146 PIK3C2GO75747 1445 aa17.83■□□□□ 0.45
VPS51-210ENST00000531146 PLEKHH1Q9ULM0 1364 aa17.83■□□□□ 0.45
VPS51-210ENST00000531146 QTRT2Q9H974 415 aaKnown RBP17.83■□□□□ 0.44
VPS51-210ENST00000531146 ESCO1Q5FWF5 840 aa17.82■□□□□ 0.44
VPS51-210ENST00000531146 ABCC11Q96J66 1382 aa17.81■□□□□ 0.44
VPS51-210ENST00000531146 NGLY1Q96IV0 654 aa17.81■□□□□ 0.44
VPS51-210ENST00000531146 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
VPS51-210ENST00000531146 RGS12O14924 1447 aa17.81■□□□□ 0.44
VPS51-210ENST00000531146 NUTM2FA1L443 756 aa17.8■□□□□ 0.44
VPS51-210ENST00000531146 PXDNQ92626 1479 aa17.8■□□□□ 0.44
VPS51-210ENST00000531146 COL22A1Q8NFW1 1626 aaPredicted RBP17.8■□□□□ 0.44
VPS51-210ENST00000531146 FOXO3O43524 673 aa17.79■□□□□ 0.44
VPS51-210ENST00000531146 RBM6P78332 1123 aaKnown RBP17.79■□□□□ 0.44
VPS51-210ENST00000531146 XPCQ01831 940 aaPredicted RBP17.79■□□□□ 0.44
VPS51-210ENST00000531146 YTHDC2Q9H6S0 1430 aaKnown RBP17.79■□□□□ 0.44
VPS51-210ENST00000531146 NPHP3Q7Z494 1330 aa17.78■□□□□ 0.44
VPS51-210ENST00000531146 MYOM2P54296 1465 aa17.77■□□□□ 0.44
VPS51-210ENST00000531146 NRXN1Q9ULB1 1477 aa17.76■□□□□ 0.43
VPS51-210ENST00000531146 C14orf93Q9H972 538 aaKnown RBP17.76■□□□□ 0.43
VPS51-210ENST00000531146 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
VPS51-210ENST00000531146 FNBP4Q8N3X1 1017 aaPredicted RBP17.75■□□□□ 0.43
VPS51-210ENST00000531146 USP21Q9UK80 565 aa17.75■□□□□ 0.43
VPS51-210ENST00000531146 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
VPS51-210ENST00000531146 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
VPS51-210ENST00000531146 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
VPS51-210ENST00000531146 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
VPS51-210ENST00000531146 ATRNO75882 1429 aa17.72■□□□□ 0.43
VPS51-210ENST00000531146 TRPC5Q9UL62 973 aaPredicted RBP17.71■□□□□ 0.43
VPS51-210ENST00000531146 PCGF6Q9BYE7 350 aa17.7■□□□□ 0.42
VPS51-210ENST00000531146 RGPD8O14715 1765 aaPredicted RBP17.7■□□□□ 0.42
VPS51-210ENST00000531146 MARF1Q9Y4F3 1742 aaKnown RBP17.69■□□□□ 0.42
VPS51-210ENST00000531146 BCL9LQ86UU0 1499 aa17.69■□□□□ 0.42
VPS51-210ENST00000531146 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
VPS51-210ENST00000531146 KIF1AQ12756 1690 aa17.69■□□□□ 0.42
VPS51-210ENST00000531146 SPATA31A3Q5VYP0 1347 aa17.69■□□□□ 0.42
VPS51-210ENST00000531146 SAFB2Q14151 953 aaKnown RBP eCLIP17.68■□□□□ 0.42
VPS51-210ENST00000531146 PRAM1Q96QH2 718 aa17.68■□□□□ 0.42
VPS51-210ENST00000531146 KRT28Q7Z3Y7 464 aa17.67■□□□□ 0.42
VPS51-210ENST00000531146 EP400Q96L91 3159 aa17.66■□□□□ 0.42
VPS51-210ENST00000531146 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
VPS51-210ENST00000531146 ADGRB1O14514 1584 aa17.65■□□□□ 0.42
VPS51-210ENST00000531146 DLC1Q96QB1 1528 aa17.64■□□□□ 0.41
VPS51-210ENST00000531146 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
VPS51-210ENST00000531146 SLIT2O94813 1529 aa17.62■□□□□ 0.41
VPS51-210ENST00000531146 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
VPS51-210ENST00000531146 GJD4Q96KN9 370 aaPredicted RBP17.62■□□□□ 0.41
VPS51-210ENST00000531146 POGKQ9P215 609 aa17.62■□□□□ 0.41
VPS51-210ENST00000531146 TNS3Q68CZ2 1445 aa17.62■□□□□ 0.41
VPS51-210ENST00000531146 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
VPS51-210ENST00000531146 CABLES1Q8TDN4 633 aa17.61■□□□□ 0.41
VPS51-210ENST00000531146 TRAK1Q9UPV9 953 aa17.61■□□□□ 0.41
VPS51-210ENST00000531146 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
VPS51-210ENST00000531146 SRCAPQ6ZRS2 3230 aa17.6■□□□□ 0.41
VPS51-210ENST00000531146 UNC5CLQ8IV45 518 aa17.6■□□□□ 0.41
VPS51-210ENST00000531146 PMFBP1Q8TBY8 1022 aa17.6■□□□□ 0.41
VPS51-210ENST00000531146 DCAF11Q8TEB1 546 aa17.6■□□□□ 0.41
VPS51-210ENST00000531146 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
VPS51-210ENST00000531146 ADGRB2O60241 1585 aa17.6■□□□□ 0.41
VPS51-210ENST00000531146 GLI3P10071 1580 aa17.59■□□□□ 0.41
VPS51-210ENST00000531146 ANKARQ7Z5J8 1434 aa17.59■□□□□ 0.41
VPS51-210ENST00000531146 SBNO1A3KN83 1393 aa17.59■□□□□ 0.41
VPS51-210ENST00000531146 PLEKHG5O94827 1062 aa17.59■□□□□ 0.41
VPS51-210ENST00000531146 PSME1Q06323 249 aa17.59■□□□□ 0.41
VPS51-210ENST00000531146 RALGAPBQ86X10 1494 aa17.58■□□□□ 0.41
VPS51-210ENST00000531146 MINK1Q8N4C8 1332 aaPredicted RBP17.57■□□□□ 0.4
VPS51-210ENST00000531146 ABCA3Q99758 1704 aa17.57■□□□□ 0.4
VPS51-210ENST00000531146 PRR36Q9H6K5 1346 aa17.56■□□□□ 0.4
VPS51-210ENST00000531146 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
VPS51-210ENST00000531146 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
VPS51-210ENST00000531146 HRCP23327 699 aa17.55■□□□□ 0.4
VPS51-210ENST00000531146 TRPM3Q9HCF6 1732 aaPredicted RBP17.55■□□□□ 0.4
VPS51-210ENST00000531146 ARHGEF10O15013 1369 aa17.54■□□□□ 0.4
VPS51-210ENST00000531146 PLCH1Q4KWH8 1693 aa17.54■□□□□ 0.4
VPS51-210ENST00000531146 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.4
VPS51-210ENST00000531146 BRWD3Q6RI45 1802 aa17.52■□□□□ 0.4
VPS51-210ENST00000531146 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.4
VPS51-210ENST00000531146 FAM83GA6ND36 823 aa17.51■□□□□ 0.39
VPS51-210ENST00000531146 VPS72Q15906 364 aa17.51■□□□□ 0.39
VPS51-210ENST00000531146 STAC3Q96MF2 364 aa17.51■□□□□ 0.39
VPS51-210ENST00000531146 NWD2Q9ULI1 1742 aa17.51■□□□□ 0.39
VPS51-210ENST00000531146 ALS2Q96Q42 1657 aa17.51■□□□□ 0.39
VPS51-210ENST00000531146 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
VPS51-210ENST00000531146 EIF3AQ14152 1382 aaKnown RBP17.5■□□□□ 0.39
VPS51-210ENST00000531146 CCDC125Q86Z20 511 aa17.49■□□□□ 0.39
VPS51-210ENST00000531146 SEPT12Q8IYM1 358 aa17.49■□□□□ 0.39
VPS51-210ENST00000531146 GPRASP1Q5JY77 1395 aa17.49■□□□□ 0.39
VPS51-210ENST00000531146 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
VPS51-210ENST00000531146 CCDC9Q9Y3X0 531 aaKnown RBP17.47■□□□□ 0.39
VPS51-210ENST00000531146 NRAPQ86VF7 1730 aa17.47■□□□□ 0.39
VPS51-210ENST00000531146 ATP7BP35670 1465 aa17.46■□□□□ 0.39
VPS51-210ENST00000531146 NGDNQ8NEJ9 315 aaKnown RBP17.46■□□□□ 0.39
VPS51-210ENST00000531146 CRYBG1Q9Y4K1 1723 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms