RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 CDK13Q14004 1512 aaKnown RBP6.35□□□□□ -1.39
GMDS-207ENST00000530459 ZNF500O60304 480 aaPredicted RBP6.34□□□□□ -1.39
GMDS-207ENST00000530459 SEC24BO95487 1268 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 IGHDP01880 384 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 NUBP1P53384 320 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 RBM10P98175 930 aaKnown RBP6.34□□□□□ -1.39
GMDS-207ENST00000530459 KIAA1211Q6ZU35 1233 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 SNX21Q969T3 373 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 CLUAP1Q96AJ1 413 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 FAM212AQ96EL1 285 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 POLR3GLQ9BT43 218 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
GMDS-207ENST00000530459 STK24Q9Y6E0 443 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 SHROOM2Q13796 1616 aa6.34□□□□□ -1.39
GMDS-207ENST00000530459 ANKRD50Q9ULJ7 1429 aa6.33□□□□□ -1.4
GMDS-207ENST00000530459 E9PSI1 815 aa6.33□□□□□ -1.4
GMDS-207ENST00000530459 NCLP19338 710 aaKnown RBP6.33□□□□□ -1.4
GMDS-207ENST00000530459 MCM5P33992 734 aa6.33□□□□□ -1.4
GMDS-207ENST00000530459 RIPK4P57078 832 aa6.33□□□□□ -1.4
GMDS-207ENST00000530459 SMC5Q8IY18 1101 aa6.33□□□□□ -1.4
GMDS-207ENST00000530459 TESK2Q96S53 571 aa6.33□□□□□ -1.4
GMDS-207ENST00000530459 ADAMTS8Q9UP79 889 aa6.33□□□□□ -1.4
GMDS-207ENST00000530459 ERBINQ96RT1 1412 aa6.33□□□□□ -1.4
GMDS-207ENST00000530459 RNF17Q9BXT8 1623 aaKnown RBP6.32□□□□□ -1.4
GMDS-207ENST00000530459 SYNMO15061 1565 aa6.32□□□□□ -1.4
GMDS-207ENST00000530459 DYNC1I1O14576 645 aa6.32□□□□□ -1.4
GMDS-207ENST00000530459 LMOD2Q6P5Q4 547 aa6.32□□□□□ -1.4
GMDS-207ENST00000530459 BCL11BQ9C0K0 894 aaPredicted RBP6.32□□□□□ -1.4
GMDS-207ENST00000530459 SYNJ2O15056 1496 aa6.32□□□□□ -1.4
GMDS-207ENST00000530459 CCDC141Q6ZP82 1450 aa6.32□□□□□ -1.4
GMDS-207ENST00000530459 TROQ12816 1431 aaPredicted RBP6.32□□□□□ -1.4
GMDS-207ENST00000530459 GPATCH8Q9UKJ3 1502 aaKnown RBP6.31□□□□□ -1.4
GMDS-207ENST00000530459 WDR7Q9Y4E6 1490 aa6.31□□□□□ -1.4
GMDS-207ENST00000530459 SENP3-EIF4A1A0A087X0R7 540 aa6.31□□□□□ -1.4
GMDS-207ENST00000530459 PPP2R1AP30153 589 aa6.31□□□□□ -1.4
GMDS-207ENST00000530459 FGD1P98174 961 aa6.31□□□□□ -1.4
GMDS-207ENST00000530459 WDR43Q15061 677 aaKnown RBP eCLIP6.31□□□□□ -1.4
GMDS-207ENST00000530459 CSPP1Q1MSJ5 1256 aa6.31□□□□□ -1.4
GMDS-207ENST00000530459 GBP4Q96PP9 640 aa6.31□□□□□ -1.4
GMDS-207ENST00000530459 KANK1Q14678 1352 aa6.31□□□□□ -1.4
GMDS-207ENST00000530459 ASXL1Q8IXJ9 1541 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 PBRM1Q86U86 1689 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 ATP10AO60312 1499 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 NUP153P49790 1475 aaKnown RBP6.3□□□□□ -1.4
GMDS-207ENST00000530459 GRIN2AQ12879 1464 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 RAPGEF6Q8TEU7 1601 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.3□□□□□ -1.4
GMDS-207ENST00000530459 RBM25P49756 843 aaKnown RBP6.3□□□□□ -1.4
GMDS-207ENST00000530459 TMF1P82094 1093 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 RAB3GAP1Q15042 981 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 GAS2L3Q86XJ1 694 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 ZFP91Q96JP5 570 aaPredicted RBP6.3□□□□□ -1.4
GMDS-207ENST00000530459 PDLIM2Q96JY6 352 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 C22orf23Q9BZE7 217 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 PANK3Q9H999 370 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 NOL7Q9UMY1 257 aaKnown RBP6.3□□□□□ -1.4
GMDS-207ENST00000530459 ARHGEF5Q12774 1597 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 DISP3Q9P2K9 1392 aa6.3□□□□□ -1.4
GMDS-207ENST00000530459 MSNP26038 577 aaKnown RBP6.29□□□□□ -1.4
GMDS-207ENST00000530459 ZNF445P59923 1031 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 DMTNQ08495 405 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 CNGB1Q14028 1251 aaPredicted RBP6.29□□□□□ -1.4
GMDS-207ENST00000530459 ZNF326Q5BKZ1 582 aaKnown RBP6.29□□□□□ -1.4
GMDS-207ENST00000530459 CDC42BPAQ5VT25 1732 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 HSCBQ8IWL3 235 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 ANP32BQ92688 251 aaKnown RBP6.29□□□□□ -1.4
GMDS-207ENST00000530459 RWDD1Q9H446 243 aaPredicted RBP6.29□□□□□ -1.4
GMDS-207ENST00000530459 WDR70Q9NW82 654 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 YEATS2Q9ULM3 1422 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 PDZRN3Q9UPQ7 1066 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 FAM135AQ9P2D6 1515 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 NUP155O75694 1391 aa6.29□□□□□ -1.4
GMDS-207ENST00000530459 KIAA0556O60303 1618 aa6.28□□□□□ -1.4
GMDS-207ENST00000530459 MAGI2Q86UL8 1455 aa6.28□□□□□ -1.4
GMDS-207ENST00000530459 ZNF644Q9H582 1327 aaPredicted RBP6.28□□□□□ -1.4
GMDS-207ENST00000530459 KIF20AO95235 890 aa6.28□□□□□ -1.4
GMDS-207ENST00000530459 HSP90AB1P08238 724 aaKnown RBP6.28□□□□□ -1.4
GMDS-207ENST00000530459 KLHL40Q2TBA0 621 aa6.28□□□□□ -1.4
GMDS-207ENST00000530459 CC2D1BQ5T0F9 858 aaKnown RBP6.28□□□□□ -1.4
GMDS-207ENST00000530459 KCNV2Q8TDN2 545 aa6.28□□□□□ -1.4
GMDS-207ENST00000530459 GTPBP4Q9BZE4 634 aaKnown RBP6.28□□□□□ -1.4
GMDS-207ENST00000530459 GZF1Q9H116 711 aaPredicted RBP6.28□□□□□ -1.4
GMDS-207ENST00000530459 IQGAP1P46940 1657 aa6.28□□□□□ -1.4
GMDS-207ENST00000530459 URB2Q14146 1524 aaKnown RBP6.28□□□□□ -1.4
GMDS-207ENST00000530459 A2MP01023 1474 aa6.28□□□□□ -1.4
GMDS-207ENST00000530459 UNC13BO14795 1591 aa6.27□□□□□ -1.41
GMDS-207ENST00000530459 ADAMTS12P58397 1594 aa6.27□□□□□ -1.41
GMDS-207ENST00000530459 BCAR3O75815 825 aa6.27□□□□□ -1.41
GMDS-207ENST00000530459 NASPP49321 788 aaPredicted RBP6.27□□□□□ -1.41
GMDS-207ENST00000530459 CDCA8Q53HL2 280 aa6.27□□□□□ -1.41
GMDS-207ENST00000530459 SASS6Q6UVJ0 657 aa6.27□□□□□ -1.41
GMDS-207ENST00000530459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.27□□□□□ -1.41
GMDS-207ENST00000530459 TNPO1Q92973 898 aaKnown RBP6.27□□□□□ -1.41
GMDS-207ENST00000530459 STAC3Q96MF2 364 aa6.27□□□□□ -1.41
GMDS-207ENST00000530459 SGIP1Q9BQI5 828 aa6.27□□□□□ -1.41
GMDS-207ENST00000530459 CCDC94Q9BW85 323 aaPredicted RBP6.27□□□□□ -1.41
GMDS-207ENST00000530459 TARBP1Q13395 1621 aaKnown RBP6.27□□□□□ -1.41
GMDS-207ENST00000530459 REREQ9P2R6 1566 aa6.27□□□□□ -1.41
GMDS-207ENST00000530459 KIF16BQ96L93 1317 aa6.26□□□□□ -1.41
GMDS-207ENST00000530459 C9orf84Q5VXU9 1444 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms