RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 ATRNO75882 1429 aa16.74■□□□□ 0.27
CTNND1-224ENST00000530068 ESCO1Q5FWF5 840 aa16.74■□□□□ 0.27
CTNND1-224ENST00000530068 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
CTNND1-224ENST00000530068 NAIPQ13075 1403 aa16.72■□□□□ 0.27
CTNND1-224ENST00000530068 SRCAPQ6ZRS2 3230 aa16.72■□□□□ 0.27
CTNND1-224ENST00000530068 PPARGC1BQ86YN6 1023 aaKnown RBP16.71■□□□□ 0.27
CTNND1-224ENST00000530068 MYOM2P54296 1465 aa16.7■□□□□ 0.26
CTNND1-224ENST00000530068 KIF1BO60333 1816 aa16.7■□□□□ 0.26
CTNND1-224ENST00000530068 FOXO3O43524 673 aa16.69■□□□□ 0.26
CTNND1-224ENST00000530068 GJD4Q96KN9 370 aaPredicted RBP16.69■□□□□ 0.26
CTNND1-224ENST00000530068 RRBP1Q9P2E9 1410 aaKnown RBP16.69■□□□□ 0.26
CTNND1-224ENST00000530068 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
CTNND1-224ENST00000530068 COL22A1Q8NFW1 1626 aaPredicted RBP16.66■□□□□ 0.26
CTNND1-224ENST00000530068 BCL9LQ86UU0 1499 aa16.66■□□□□ 0.26
CTNND1-224ENST00000530068 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
CTNND1-224ENST00000530068 STK26Q9P289 416 aa16.65■□□□□ 0.26
CTNND1-224ENST00000530068 ABCC11Q96J66 1382 aa16.64■□□□□ 0.26
CTNND1-224ENST00000530068 ANKRD30BQ9BXX2 1392 aa16.64■□□□□ 0.26
CTNND1-224ENST00000530068 XPCQ01831 940 aaPredicted RBP16.64■□□□□ 0.25
CTNND1-224ENST00000530068 PXDNQ92626 1479 aa16.64■□□□□ 0.25
CTNND1-224ENST00000530068 TECPR2O15040 1411 aa16.63■□□□□ 0.25
CTNND1-224ENST00000530068 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
CTNND1-224ENST00000530068 SPATA31A3Q5VYP0 1347 aa16.62■□□□□ 0.25
CTNND1-224ENST00000530068 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
CTNND1-224ENST00000530068 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
CTNND1-224ENST00000530068 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
CTNND1-224ENST00000530068 HAP1P54257 671 aaPredicted RBP16.61■□□□□ 0.25
CTNND1-224ENST00000530068 PSME1Q06323 249 aa16.61■□□□□ 0.25
CTNND1-224ENST00000530068 SF3B2Q13435 895 aaKnown RBP16.61■□□□□ 0.25
CTNND1-224ENST00000530068 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
CTNND1-224ENST00000530068 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
CTNND1-224ENST00000530068 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
CTNND1-224ENST00000530068 BLMP54132 1417 aaPredicted RBP16.6■□□□□ 0.25
CTNND1-224ENST00000530068 SLIT2O94813 1529 aa16.58■□□□□ 0.24
CTNND1-224ENST00000530068 RALGAPBQ86X10 1494 aa16.57■□□□□ 0.24
CTNND1-224ENST00000530068 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
CTNND1-224ENST00000530068 VPS72Q15906 364 aa16.57■□□□□ 0.24
CTNND1-224ENST00000530068 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
CTNND1-224ENST00000530068 EP400Q96L91 3159 aa16.57■□□□□ 0.24
CTNND1-224ENST00000530068 PPLO60437 1756 aa16.56■□□□□ 0.24
CTNND1-224ENST00000530068 PHF8Q9UPP1 1060 aa16.56■□□□□ 0.24
CTNND1-224ENST00000530068 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
CTNND1-224ENST00000530068 SEPT12Q8IYM1 358 aa16.55■□□□□ 0.24
CTNND1-224ENST00000530068 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
CTNND1-224ENST00000530068 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
CTNND1-224ENST00000530068 SBNO1A3KN83 1393 aa16.53■□□□□ 0.24
CTNND1-224ENST00000530068 ARHGEF10O15013 1369 aa16.53■□□□□ 0.24
CTNND1-224ENST00000530068 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
CTNND1-224ENST00000530068 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
CTNND1-224ENST00000530068 MPHOSPH9Q99550 1183 aa16.53■□□□□ 0.24
CTNND1-224ENST00000530068 PIK3C2GO75747 1445 aa16.53■□□□□ 0.24
CTNND1-224ENST00000530068 TNS3Q68CZ2 1445 aa16.53■□□□□ 0.24
CTNND1-224ENST00000530068 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
CTNND1-224ENST00000530068 C14orf93Q9H972 538 aaKnown RBP16.52■□□□□ 0.24
CTNND1-224ENST00000530068 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.52■□□□□ 0.24
CTNND1-224ENST00000530068 KIF1AQ12756 1690 aa16.52■□□□□ 0.23
CTNND1-224ENST00000530068 LMOD2Q6P5Q4 547 aa16.51■□□□□ 0.23
CTNND1-224ENST00000530068 KRT27Q7Z3Y8 459 aa16.51■□□□□ 0.23
CTNND1-224ENST00000530068 MARF1Q9Y4F3 1742 aaKnown RBP16.5■□□□□ 0.23
CTNND1-224ENST00000530068 DEFB132Q7Z7B7 95 aa16.5■□□□□ 0.23
CTNND1-224ENST00000530068 GLI3P10071 1580 aa16.49■□□□□ 0.23
CTNND1-224ENST00000530068 BAG6P46379 1132 aa16.49■□□□□ 0.23
CTNND1-224ENST00000530068 USP32Q8NFA0 1604 aa16.48■□□□□ 0.23
CTNND1-224ENST00000530068 CABLES1Q8TDN4 633 aa16.48■□□□□ 0.23
CTNND1-224ENST00000530068 POGKQ9P215 609 aa16.48■□□□□ 0.23
CTNND1-224ENST00000530068 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
CTNND1-224ENST00000530068 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
CTNND1-224ENST00000530068 A0A0G2JS52 829 aa16.47■□□□□ 0.23
CTNND1-224ENST00000530068 MYT1Q01538 1121 aa16.47■□□□□ 0.23
CTNND1-224ENST00000530068 PRAM1Q96QH2 718 aa16.47■□□□□ 0.23
CTNND1-224ENST00000530068 NRXN1Q9ULB1 1477 aa16.46■□□□□ 0.23
CTNND1-224ENST00000530068 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
CTNND1-224ENST00000530068 FAM83GA6ND36 823 aa16.45■□□□□ 0.22
CTNND1-224ENST00000530068 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
CTNND1-224ENST00000530068 CFAP70Q5T0N1 1121 aa16.45■□□□□ 0.22
CTNND1-224ENST00000530068 EIF3AQ14152 1382 aaKnown RBP16.44■□□□□ 0.22
CTNND1-224ENST00000530068 GPRASP1Q5JY77 1395 aa16.44■□□□□ 0.22
CTNND1-224ENST00000530068 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
CTNND1-224ENST00000530068 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
CTNND1-224ENST00000530068 FAM98CQ17RN3 349 aaKnown RBP16.42■□□□□ 0.22
CTNND1-224ENST00000530068 BTG4Q9NY30 223 aa16.42■□□□□ 0.22
CTNND1-224ENST00000530068 NWD2Q9ULI1 1742 aa16.41■□□□□ 0.22
CTNND1-224ENST00000530068 IFT172Q9UG01 1749 aa16.4■□□□□ 0.22
CTNND1-224ENST00000530068 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
CTNND1-224ENST00000530068 HRCP23327 699 aa16.38■□□□□ 0.21
CTNND1-224ENST00000530068 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
CTNND1-224ENST00000530068 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
CTNND1-224ENST00000530068 SPATA31A5Q5VU36 1347 aa16.37■□□□□ 0.21
CTNND1-224ENST00000530068 SPATA31A7Q8IWB4 1347 aa16.37■□□□□ 0.21
CTNND1-224ENST00000530068 PSDA5PKW4 1024 aaPredicted RBP16.36■□□□□ 0.21
CTNND1-224ENST00000530068 PRDM11Q9NQV5 511 aa16.36■□□□□ 0.21
CTNND1-224ENST00000530068 TRAK1Q9UPV9 953 aa16.36■□□□□ 0.21
CTNND1-224ENST00000530068 BRWD3Q6RI45 1802 aa16.35■□□□□ 0.21
CTNND1-224ENST00000530068 LRP5O75197 1615 aa16.35■□□□□ 0.21
CTNND1-224ENST00000530068 PLCH1Q4KWH8 1693 aa16.35■□□□□ 0.21
CTNND1-224ENST00000530068 WASLO00401 505 aaPredicted RBP16.35■□□□□ 0.21
CTNND1-224ENST00000530068 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
CTNND1-224ENST00000530068 EN1Q05925 392 aaPredicted RBP16.34■□□□□ 0.21
CTNND1-224ENST00000530068 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
CTNND1-224ENST00000530068 MINK1Q8N4C8 1332 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms