RNA–Protein interactions for RNA: ENST00000529539.5

CHID1-216, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-216ENST00000529539 STK26Q9P289 416 aa31.28■■■□□ 2.6
CHID1-216ENST00000529539 DHX57Q6P158 1386 aaKnown RBP31.25■■■□□ 2.59
CHID1-216ENST00000529539 LRP6O75581 1613 aa31.24■■■□□ 2.59
CHID1-216ENST00000529539 CFAP70Q5T0N1 1121 aa31.22■■■□□ 2.59
CHID1-216ENST00000529539 WAPLQ7Z5K2 1190 aa31.22■■■□□ 2.59
CHID1-216ENST00000529539 ORAI2Q96SN7 254 aa31.21■■■□□ 2.59
CHID1-216ENST00000529539 SOS2Q07890 1332 aaPredicted RBP31.2■■■□□ 2.58
CHID1-216ENST00000529539 POTEAQ6S8J7 498 aa31.19■■■□□ 2.58
CHID1-216ENST00000529539 PLEKHH1Q9ULM0 1364 aa31.17■■■□□ 2.58
CHID1-216ENST00000529539 MEX3CQ5U5Q3 659 aaKnown RBP31.17■■■□□ 2.58
CHID1-216ENST00000529539 DDX17Q92841 729 aaKnown RBP31.16■■■□□ 2.58
CHID1-216ENST00000529539 PNPLA6Q8IY17 1366 aa31.16■■■□□ 2.58
CHID1-216ENST00000529539 DLC1Q96QB1 1528 aa31.15■■■□□ 2.58
CHID1-216ENST00000529539 DCAF11Q8TEB1 546 aa31.14■■■□□ 2.58
CHID1-216ENST00000529539 NPHP3Q7Z494 1330 aa31.14■■■□□ 2.58
CHID1-216ENST00000529539 ESCO1Q5FWF5 840 aa31.13■■■□□ 2.57
CHID1-216ENST00000529539 ZNF772Q68DY9 489 aaPredicted RBP31.13■■■□□ 2.57
CHID1-216ENST00000529539 ADGRB1O14514 1584 aa31.13■■■□□ 2.57
CHID1-216ENST00000529539 FMN2Q9NZ56 1722 aa31.11■■■□□ 2.57
CHID1-216ENST00000529539 NUTM2BA6NNL0 878 aaPredicted RBP31.08■■■□□ 2.57
CHID1-216ENST00000529539 NUTM2EB1AL46 878 aaPredicted RBP31.08■■■□□ 2.57
CHID1-216ENST00000529539 NUTM2AQ8IVF1 878 aaPredicted RBP31.08■■■□□ 2.57
CHID1-216ENST00000529539 KDM2AQ9Y2K7 1162 aa31.08■■■□□ 2.57
CHID1-216ENST00000529539 PRAM1Q96QH2 718 aa31.06■■■□□ 2.56
CHID1-216ENST00000529539 PXDNQ92626 1479 aa31.05■■■□□ 2.56
CHID1-216ENST00000529539 KIF1AQ12756 1690 aa31.03■■■□□ 2.56
CHID1-216ENST00000529539 POGKQ9P215 609 aa31.03■■■□□ 2.56
CHID1-216ENST00000529539 COL22A1Q8NFW1 1626 aaPredicted RBP31.02■■■□□ 2.56
CHID1-216ENST00000529539 FOXO3O43524 673 aa31.02■■■□□ 2.56
CHID1-216ENST00000529539 ADGRB2O60241 1585 aa31.01■■■□□ 2.56
CHID1-216ENST00000529539 NUTM2FA1L443 756 aa30.99■■■□□ 2.55
CHID1-216ENST00000529539 TRAK1Q9UPV9 953 aa30.98■■■□□ 2.55
CHID1-216ENST00000529539 ANKARQ7Z5J8 1434 aa30.98■■■□□ 2.55
CHID1-216ENST00000529539 AFF2P51816 1311 aa30.98■■■□□ 2.55
CHID1-216ENST00000529539 SAFB2Q14151 953 aaKnown RBP eCLIP30.95■■■□□ 2.55
CHID1-216ENST00000529539 EIF3AQ14152 1382 aaKnown RBP30.94■■■□□ 2.54
CHID1-216ENST00000529539 KIAA1210Q9ULL0 1709 aa30.94■■■□□ 2.54
CHID1-216ENST00000529539 PHF8Q9UPP1 1060 aa30.94■■■□□ 2.54
CHID1-216ENST00000529539 C8orf37Q96NL8 207 aa30.93■■■□□ 2.54
CHID1-216ENST00000529539 CDK12Q9NYV4 1490 aaPredicted RBP30.91■■■□□ 2.54
CHID1-216ENST00000529539 RXRBP28702 533 aa30.91■■■□□ 2.54
CHID1-216ENST00000529539 RGPD8O14715 1765 aaPredicted RBP30.9■■■□□ 2.54
CHID1-216ENST00000529539 ADAMTS2O95450 1211 aa30.89■■■□□ 2.54
CHID1-216ENST00000529539 XPCQ01831 940 aaPredicted RBP30.89■■■□□ 2.54
CHID1-216ENST00000529539 NGLY1Q96IV0 654 aa30.89■■■□□ 2.54
CHID1-216ENST00000529539 SPATA31A3Q5VYP0 1347 aa30.89■■■□□ 2.54
CHID1-216ENST00000529539 PSME1Q06323 249 aa30.88■■■□□ 2.53
CHID1-216ENST00000529539 KRT28Q7Z3Y7 464 aa30.88■■■□□ 2.53
CHID1-216ENST00000529539 USP32Q8NFA0 1604 aa30.86■■■□□ 2.53
CHID1-216ENST00000529539 ARHGEF28Q8N1W1 1705 aaKnown RBP30.86■■■□□ 2.53
CHID1-216ENST00000529539 WASLO00401 505 aaPredicted RBP30.85■■■□□ 2.53
CHID1-216ENST00000529539 FNBP4Q8N3X1 1017 aaPredicted RBP30.85■■■□□ 2.53
CHID1-216ENST00000529539 TULP4Q9NRJ4 1543 aa30.84■■■□□ 2.53
CHID1-216ENST00000529539 SBNO1A3KN83 1393 aa30.84■■■□□ 2.53
CHID1-216ENST00000529539 MINK1Q8N4C8 1332 aaPredicted RBP30.84■■■□□ 2.53
CHID1-216ENST00000529539 QTRT2Q9H974 415 aaKnown RBP30.83■■■□□ 2.53
CHID1-216ENST00000529539 RBM6P78332 1123 aaKnown RBP30.82■■■□□ 2.52
CHID1-216ENST00000529539 HIRIP3Q9BW71 556 aaPredicted RBP30.82■■■□□ 2.52
CHID1-216ENST00000529539 TNS3Q68CZ2 1445 aa30.81■■■□□ 2.52
CHID1-216ENST00000529539 MARF1Q9Y4F3 1742 aaKnown RBP30.8■■■□□ 2.52
CHID1-216ENST00000529539 USP21Q9UK80 565 aa30.79■■■□□ 2.52
CHID1-216ENST00000529539 ARHGEF10O15013 1369 aa30.78■■■□□ 2.52
CHID1-216ENST00000529539 PRR36Q9H6K5 1346 aa30.76■■■□□ 2.52
CHID1-216ENST00000529539 TRPC5Q9UL62 973 aaPredicted RBP30.76■■■□□ 2.51
CHID1-216ENST00000529539 PMFBP1Q8TBY8 1022 aa30.75■■■□□ 2.51
CHID1-216ENST00000529539 L3MBTL2Q969R5 705 aa30.75■■■□□ 2.51
CHID1-216ENST00000529539 NBPF1Q3BBV0 1214 aa30.74■■■□□ 2.51
CHID1-216ENST00000529539 GPRASP1Q5JY77 1395 aa30.73■■■□□ 2.51
CHID1-216ENST00000529539 ATRNO75882 1429 aa30.72■■■□□ 2.51
CHID1-216ENST00000529539 ATP7BP35670 1465 aa30.7■■■□□ 2.51
CHID1-216ENST00000529539 BCL9LQ86UU0 1499 aa30.7■■■□□ 2.51
CHID1-216ENST00000529539 ITSN1Q15811 1721 aa30.7■■■□□ 2.51
CHID1-216ENST00000529539 SIN3AQ96ST3 1273 aa30.7■■■□□ 2.51
CHID1-216ENST00000529539 TRPM3Q9HCF6 1732 aaPredicted RBP30.69■■■□□ 2.5
CHID1-216ENST00000529539 RGS12O14924 1447 aa30.68■■■□□ 2.5
CHID1-216ENST00000529539 NUDT16Q96DE0 195 aaKnown RBP30.68■■■□□ 2.5
CHID1-216ENST00000529539 NGDNQ8NEJ9 315 aaKnown RBP30.66■■■□□ 2.5
CHID1-216ENST00000529539 CDK19Q9BWU1 502 aa30.66■■■□□ 2.5
CHID1-216ENST00000529539 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.66■■■□□ 2.5
CHID1-216ENST00000529539 SLIT2O94813 1529 aa30.66■■■□□ 2.5
CHID1-216ENST00000529539 HAP1P54257 671 aaPredicted RBP30.64■■■□□ 2.5
CHID1-216ENST00000529539 CENPJQ9HC77 1338 aaPredicted RBP30.64■■■□□ 2.5
CHID1-216ENST00000529539 ALS2Q96Q42 1657 aa30.64■■■□□ 2.5
CHID1-216ENST00000529539 LMOD2Q6P5Q4 547 aa30.63■■■□□ 2.49
CHID1-216ENST00000529539 UPF1Q92900 1129 aaKnown RBP eCLIP30.63■■■□□ 2.492e-15■■■■■ 66.8
CHID1-216ENST00000529539 CCDC61Q9Y6R9 512 aa30.63■■■□□ 2.49
CHID1-216ENST00000529539 TRIM26Q12899 539 aaPredicted RBP30.62■■■□□ 2.49
CHID1-216ENST00000529539 NEUROD1Q13562 356 aa30.62■■■□□ 2.49
CHID1-216ENST00000529539 UNC5CLQ8IV45 518 aa30.62■■■□□ 2.49
CHID1-216ENST00000529539 ABCA3Q99758 1704 aa30.61■■■□□ 2.49
CHID1-216ENST00000529539 TRPM1Q7Z4N2 1603 aa30.61■■■□□ 2.49
CHID1-216ENST00000529539 POLR3AO14802 1390 aaPredicted RBP30.6■■■□□ 2.49
CHID1-216ENST00000529539 TOPAZ1Q8N9V7 1692 aa30.6■■■□□ 2.49
CHID1-216ENST00000529539 CABLES1Q8TDN4 633 aa30.6■■■□□ 2.49
CHID1-216ENST00000529539 PLEKHG3A1L390 1219 aa30.59■■■□□ 2.49
CHID1-216ENST00000529539 GJD4Q96KN9 370 aaPredicted RBP30.58■■■□□ 2.49
CHID1-216ENST00000529539 NWD2Q9ULI1 1742 aa30.56■■■□□ 2.48
CHID1-216ENST00000529539 QRICH2Q9H0J4 1663 aa30.54■■■□□ 2.48
CHID1-216ENST00000529539 ROCK2O75116 1388 aaKnown RBP30.53■■■□□ 2.48
CHID1-216ENST00000529539 ACEP12821 1306 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms