RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CCDC7Q96M83 1385 aa34.47■■■■□ 3.11
LDLRAD3-203ENST00000528989 PTCH1Q13635 1447 aa34.45■■■■□ 3.11
LDLRAD3-203ENST00000528989 DMRT2Q9Y5R5 561 aa34.44■■■■□ 3.1
LDLRAD3-203ENST00000528989 DDX10Q13206 875 aaKnown RBP34.41■■■■□ 3.1
LDLRAD3-203ENST00000528989 ZNF335Q9H4Z2 1342 aaPredicted RBP34.41■■■■□ 3.1
LDLRAD3-203ENST00000528989 SLC24A1O60721 1099 aa34.37■■■■□ 3.09
LDLRAD3-203ENST00000528989 EVC2Q86UK5 1308 aa34.37■■■■□ 3.09
LDLRAD3-203ENST00000528989 PROSER2Q86WR7 435 aaPredicted RBP34.37■■■■□ 3.09
LDLRAD3-203ENST00000528989 CABP2Q9NPB3 220 aa34.37■■■■□ 3.09
LDLRAD3-203ENST00000528989 TULP4Q9NRJ4 1543 aa34.36■■■■□ 3.09
LDLRAD3-203ENST00000528989 NWD1Q149M9 1564 aa34.36■■■■□ 3.09
LDLRAD3-203ENST00000528989 CDK19Q9BWU1 502 aa34.35■■■■□ 3.09
LDLRAD3-203ENST00000528989 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.35■■■■□ 3.09
LDLRAD3-203ENST00000528989 STRCP1A6NGW2 1772 aa34.35■■■■□ 3.09
LDLRAD3-203ENST00000528989 SRPK2P78362 688 aaKnown RBP34.32■■■■□ 3.08
LDLRAD3-203ENST00000528989 CDCA8Q53HL2 280 aa34.32■■■■□ 3.08
LDLRAD3-203ENST00000528989 WASLO00401 505 aaPredicted RBP34.31■■■■□ 3.08
LDLRAD3-203ENST00000528989 NKTRP30414 1462 aaKnown RBP34.27■■■■□ 3.08
LDLRAD3-203ENST00000528989 NUTM2FA1L443 756 aa34.26■■■■□ 3.07
LDLRAD3-203ENST00000528989 C14orf37Q86TY3 774 aa34.26■■■■□ 3.07
LDLRAD3-203ENST00000528989 TMEM94Q12767 1356 aa34.24■■■■□ 3.07
LDLRAD3-203ENST00000528989 DIEXFQ68CQ4 756 aaKnown RBP34.22■■■■□ 3.07
LDLRAD3-203ENST00000528989 TMC1Q8TDI8 760 aa34.2■■■■□ 3.07
LDLRAD3-203ENST00000528989 SLC12A5Q9H2X9 1139 aa34.2■■■■□ 3.07
LDLRAD3-203ENST00000528989 PUS7Q96PZ0 661 aaKnown RBP34.2■■■■□ 3.06
LDLRAD3-203ENST00000528989 ADGRL3Q9HAR2 1447 aa34.18■■■■□ 3.06
LDLRAD3-203ENST00000528989 ADGRB2O60241 1585 aa34.18■■■■□ 3.06
LDLRAD3-203ENST00000528989 NALCNQ8IZF0 1738 aa34.17■■■■□ 3.06
LDLRAD3-203ENST00000528989 NUDT16Q96DE0 195 aaKnown RBP34.17■■■■□ 3.06
LDLRAD3-203ENST00000528989 PRR36Q9H6K5 1346 aa34.17■■■■□ 3.06
LDLRAD3-203ENST00000528989 LRRC7Q96NW7 1537 aa34.16■■■■□ 3.06
LDLRAD3-203ENST00000528989 PANK3Q9H999 370 aa34.15■■■■□ 3.06
LDLRAD3-203ENST00000528989 C19orf44Q9H6X5 657 aa34.14■■■■□ 3.06
LDLRAD3-203ENST00000528989 CABP1Q9NZU7 370 aa34.14■■■■□ 3.06
LDLRAD3-203ENST00000528989 ATAD2Q6PL18 1390 aa34.13■■■■□ 3.05
LDLRAD3-203ENST00000528989 CCDC61Q9Y6R9 512 aa34.1■■■■□ 3.05
LDLRAD3-203ENST00000528989 MYOM1P52179 1685 aa34.1■■■■□ 3.05
LDLRAD3-203ENST00000528989 ATP7BP35670 1465 aa34.08■■■■□ 3.05
LDLRAD3-203ENST00000528989 NCOA3Q9Y6Q9 1424 aa34.08■■■■□ 3.05
LDLRAD3-203ENST00000528989 CDC42BPGQ6DT37 1551 aa34.05■■■■□ 3.04
LDLRAD3-203ENST00000528989 XIRP1Q702N8 1843 aaKnown RBP34.05■■■■□ 3.04
LDLRAD3-203ENST00000528989 PPIP5K1Q6PFW1 1433 aa34.04■■■■□ 3.04
LDLRAD3-203ENST00000528989 CARD14Q9BXL6 1004 aa34.03■■■■□ 3.04
LDLRAD3-203ENST00000528989 LTBP4Q8N2S1 1624 aa34.03■■■■□ 3.04
LDLRAD3-203ENST00000528989 PER1O15534 1290 aaPredicted RBP34.03■■■■□ 3.04
LDLRAD3-203ENST00000528989 USP32Q8NFA0 1604 aa34.02■■■■□ 3.04
LDLRAD3-203ENST00000528989 ATF3P18847 181 aa34.02■■■■□ 3.04
LDLRAD3-203ENST00000528989 MSH6P52701 1360 aa34.02■■■■□ 3.04
LDLRAD3-203ENST00000528989 PMFBP1Q8TBY8 1022 aa34■■■■□ 3.03
LDLRAD3-203ENST00000528989 FMN2Q9NZ56 1722 aa34■■■■□ 3.03
LDLRAD3-203ENST00000528989 CNGB1Q14028 1251 aaPredicted RBP33.99■■■■□ 3.03
LDLRAD3-203ENST00000528989 CD163L1Q9NR16 1453 aa33.98■■■■□ 3.03
LDLRAD3-203ENST00000528989 NINLQ9Y2I6 1382 aa33.98■■■■□ 3.03
LDLRAD3-203ENST00000528989 A0A1W2PP64 1363 aa33.97■■■■□ 3.03
LDLRAD3-203ENST00000528989 RGPD8O14715 1765 aaPredicted RBP33.97■■■■□ 3.03
LDLRAD3-203ENST00000528989 ANKARQ7Z5J8 1434 aa33.96■■■■□ 3.03
LDLRAD3-203ENST00000528989 CADPS2Q86UW7 1296 aa33.96■■■■□ 3.03
LDLRAD3-203ENST00000528989 ANKRD36BQ8N2N9 1353 aa33.95■■■■□ 3.03
LDLRAD3-203ENST00000528989 ESCO1Q5FWF5 840 aa33.95■■■■□ 3.03
LDLRAD3-203ENST00000528989 ORAI2Q96SN7 254 aa33.95■■■■□ 3.03
LDLRAD3-203ENST00000528989 PLEKHG3A1L390 1219 aa33.95■■■■□ 3.02
LDLRAD3-203ENST00000528989 TERF2IPQ9NYB0 399 aa33.95■■■■□ 3.02
LDLRAD3-203ENST00000528989 DCCP43146 1447 aa33.93■■■■□ 3.02
LDLRAD3-203ENST00000528989 ACEP12821 1306 aa33.93■■■■□ 3.02
LDLRAD3-203ENST00000528989 HDGFL2Q7Z4V5 671 aaPredicted RBP33.91■■■■□ 3.02
LDLRAD3-203ENST00000528989 KNSTRNQ9Y448 316 aa33.91■■■■□ 3.02
LDLRAD3-203ENST00000528989 MST1RQ04912 1400 aa33.91■■■■□ 3.02
LDLRAD3-203ENST00000528989 C1orf167Q5SNV9 1468 aa33.9■■■■□ 3.02
LDLRAD3-203ENST00000528989 TOPAZ1Q8N9V7 1692 aa33.9■■■■□ 3.02
LDLRAD3-203ENST00000528989 PHF8Q9UPP1 1060 aa33.89■■■■□ 3.02
LDLRAD3-203ENST00000528989 CPSF1Q10570 1443 aaKnown RBP33.89■■■■□ 3.02
LDLRAD3-203ENST00000528989 NGDNQ8NEJ9 315 aaKnown RBP33.88■■■■□ 3.01
LDLRAD3-203ENST00000528989 NSD3Q9BZ95 1437 aa33.88■■■■□ 3.01
LDLRAD3-203ENST00000528989 MIER1Q8N108 512 aa33.86■■■■□ 3.01
LDLRAD3-203ENST00000528989 KTN1Q86UP2 1357 aaKnown RBP33.85■■■■□ 3.01
LDLRAD3-203ENST00000528989 AMER1Q5JTC6 1135 aaPredicted RBP33.85■■■■□ 3.01
LDLRAD3-203ENST00000528989 SLAIN2Q9P270 581 aa33.85■■■■□ 3.01
LDLRAD3-203ENST00000528989 CC2D1BQ5T0F9 858 aaKnown RBP33.84■■■■□ 3.01
LDLRAD3-203ENST00000528989 ZNF692Q9BU19 519 aaPredicted RBP33.83■■■■□ 3.01
LDLRAD3-203ENST00000528989 POLR3AO14802 1390 aaPredicted RBP33.82■■■■□ 3
LDLRAD3-203ENST00000528989 ANP32CO43423 234 aa33.82■■■■□ 3
LDLRAD3-203ENST00000528989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.82■■■■□ 3
LDLRAD3-203ENST00000528989 FOXO3O43524 673 aa33.81■■■■□ 3
LDLRAD3-203ENST00000528989 ITSN1Q15811 1721 aa33.81■■■■□ 3
LDLRAD3-203ENST00000528989 PRKRIP1Q9H875 184 aaPredicted RBP33.78■■■■□ 3
LDLRAD3-203ENST00000528989 DDX17Q92841 729 aaKnown RBP33.77■■■■□ 3
LDLRAD3-203ENST00000528989 USP6P35125 1406 aa33.76■■■□□ 2.99
LDLRAD3-203ENST00000528989 XPCQ01831 940 aaPredicted RBP33.76■■■□□ 2.99
LDLRAD3-203ENST00000528989 BRINP3Q76B58 766 aa33.75■■■□□ 2.99
LDLRAD3-203ENST00000528989 CGNL1Q0VF96 1302 aa33.74■■■□□ 2.99
LDLRAD3-203ENST00000528989 FYB1O15117 783 aa33.73■■■□□ 2.99
LDLRAD3-203ENST00000528989 PSME1Q06323 249 aa33.73■■■□□ 2.99
LDLRAD3-203ENST00000528989 EDC4Q6P2E9 1401 aaKnown RBP33.73■■■□□ 2.99
LDLRAD3-203ENST00000528989 AKAP12Q02952 1782 aa33.72■■■□□ 2.99
LDLRAD3-203ENST00000528989 GGNBP2Q9H3C7 697 aa33.72■■■□□ 2.99
LDLRAD3-203ENST00000528989 TTC21BQ7Z4L5 1316 aa33.71■■■□□ 2.99
LDLRAD3-203ENST00000528989 NME9Q86XW9 330 aa33.71■■■□□ 2.99
LDLRAD3-203ENST00000528989 SSH2Q76I76 1423 aa33.69■■■□□ 2.98
LDLRAD3-203ENST00000528989 ZRANB1Q9UGI0 708 aa33.69■■■□□ 2.98
LDLRAD3-203ENST00000528989 MON2Q7Z3U7 1717 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms