RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
ATG13-211ENST00000528494 RALBP1Q15311 655 aa17.24■□□□□ 0.35
ATG13-211ENST00000528494 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
ATG13-211ENST00000528494 KDM5AP29375 1690 aaKnown RBP17.23■□□□□ 0.35
ATG13-211ENST00000528494 PLEKHH1Q9ULM0 1364 aa17.22■□□□□ 0.35
ATG13-211ENST00000528494 CARD14Q9BXL6 1004 aa17.22■□□□□ 0.35
ATG13-211ENST00000528494 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
ATG13-211ENST00000528494 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.35
ATG13-211ENST00000528494 NEFLP07196 543 aa17.21■□□□□ 0.35
ATG13-211ENST00000528494 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
ATG13-211ENST00000528494 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.34
ATG13-211ENST00000528494 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
ATG13-211ENST00000528494 PLEKHG1Q9ULL1 1385 aa17.19■□□□□ 0.34
ATG13-211ENST00000528494 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
ATG13-211ENST00000528494 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
ATG13-211ENST00000528494 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
ATG13-211ENST00000528494 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
ATG13-211ENST00000528494 ADAMTS13Q76LX8 1427 aa17.19■□□□□ 0.34
ATG13-211ENST00000528494 ADAMTSL3P82987 1691 aa17.18■□□□□ 0.34
ATG13-211ENST00000528494 MYOM1P52179 1685 aa17.18■□□□□ 0.34
ATG13-211ENST00000528494 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
ATG13-211ENST00000528494 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
ATG13-211ENST00000528494 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
ATG13-211ENST00000528494 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
ATG13-211ENST00000528494 ARHGAP23Q9P227 1491 aa17.15■□□□□ 0.34
ATG13-211ENST00000528494 SLIT1O75093 1534 aa17.15■□□□□ 0.34
ATG13-211ENST00000528494 CEP170BQ9Y4F5 1589 aaPredicted RBP17.14■□□□□ 0.34
ATG13-211ENST00000528494 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
ATG13-211ENST00000528494 AMOTL2Q9Y2J4 779 aa17.13■□□□□ 0.33
ATG13-211ENST00000528494 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
ATG13-211ENST00000528494 ANKLE2Q86XL3 938 aa17.13■□□□□ 0.33
ATG13-211ENST00000528494 PUS7Q96PZ0 661 aaKnown RBP17.13■□□□□ 0.33
ATG13-211ENST00000528494 NSD3Q9BZ95 1437 aa17.12■□□□□ 0.33
ATG13-211ENST00000528494 CABP1Q9NZU7 370 aa17.12■□□□□ 0.33
ATG13-211ENST00000528494 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
ATG13-211ENST00000528494 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
ATG13-211ENST00000528494 TBX22Q9Y458 520 aa17.11■□□□□ 0.33
ATG13-211ENST00000528494 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
ATG13-211ENST00000528494 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
ATG13-211ENST00000528494 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
ATG13-211ENST00000528494 PTPRUQ92729 1446 aa17.1■□□□□ 0.33
ATG13-211ENST00000528494 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
ATG13-211ENST00000528494 WASLO00401 505 aaPredicted RBP17.1■□□□□ 0.33
ATG13-211ENST00000528494 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
ATG13-211ENST00000528494 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
ATG13-211ENST00000528494 MED14O60244 1454 aa17.09■□□□□ 0.33
ATG13-211ENST00000528494 UBE2Q2Q8WVN8 375 aa17.08■□□□□ 0.32
ATG13-211ENST00000528494 SIRT1Q96EB6 747 aa17.08■□□□□ 0.32
ATG13-211ENST00000528494 A0A1W2PP64 1363 aa17.07■□□□□ 0.32
ATG13-211ENST00000528494 ANKRD36BQ8N2N9 1353 aa17.07■□□□□ 0.32
ATG13-211ENST00000528494 TECPR2O15040 1411 aa17.07■□□□□ 0.32
ATG13-211ENST00000528494 FAM135BQ49AJ0 1406 aa17.07■□□□□ 0.32
ATG13-211ENST00000528494 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
ATG13-211ENST00000528494 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
ATG13-211ENST00000528494 CGNL1Q0VF96 1302 aa17.06■□□□□ 0.32
ATG13-211ENST00000528494 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
ATG13-211ENST00000528494 NPC1L1Q9UHC9 1359 aa17.05■□□□□ 0.32
ATG13-211ENST00000528494 KCNA6P17658 529 aa17.05■□□□□ 0.32
ATG13-211ENST00000528494 NUDT16Q96DE0 195 aaKnown RBP17.05■□□□□ 0.32
ATG13-211ENST00000528494 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
ATG13-211ENST00000528494 HDGFL2Q7Z4V5 671 aaPredicted RBP17.04■□□□□ 0.32
ATG13-211ENST00000528494 GGNBP2Q9H3C7 697 aa17.03■□□□□ 0.32
ATG13-211ENST00000528494 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
ATG13-211ENST00000528494 CPS1P31327 1500 aa17.02■□□□□ 0.32
ATG13-211ENST00000528494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
ATG13-211ENST00000528494 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
ATG13-211ENST00000528494 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
ATG13-211ENST00000528494 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
ATG13-211ENST00000528494 PPIP5K1Q6PFW1 1433 aa17■□□□□ 0.31
ATG13-211ENST00000528494 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
ATG13-211ENST00000528494 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
ATG13-211ENST00000528494 ZNF142P52746 1687 aaPredicted RBP16.99■□□□□ 0.31
ATG13-211ENST00000528494 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
ATG13-211ENST00000528494 FYB1O15117 783 aa16.99■□□□□ 0.31
ATG13-211ENST00000528494 HSPA2P54652 639 aa16.98■□□□□ 0.31
ATG13-211ENST00000528494 CCDC136Q96JN2 1154 aa16.98■□□□□ 0.31
ATG13-211ENST00000528494 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
ATG13-211ENST00000528494 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
ATG13-211ENST00000528494 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.97■□□□□ 0.31
ATG13-211ENST00000528494 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.3
ATG13-211ENST00000528494 MTHFSP49914 203 aa16.95■□□□□ 0.3
ATG13-211ENST00000528494 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
ATG13-211ENST00000528494 PTCH1Q13635 1447 aa16.95■□□□□ 0.3
ATG13-211ENST00000528494 PMFBP1Q8TBY8 1022 aa16.94■□□□□ 0.3
ATG13-211ENST00000528494 PIK3R4Q99570 1358 aa16.94■□□□□ 0.3
ATG13-211ENST00000528494 FBLN1P23142 703 aa16.93■□□□□ 0.3
ATG13-211ENST00000528494 ATP7BP35670 1465 aa16.93■□□□□ 0.3
ATG13-211ENST00000528494 NME9Q86XW9 330 aa16.92■□□□□ 0.3
ATG13-211ENST00000528494 ZRANB1Q9UGI0 708 aa16.92■□□□□ 0.3
ATG13-211ENST00000528494 NSD2O96028 1365 aa16.92■□□□□ 0.3
ATG13-211ENST00000528494 ACEP12821 1306 aa16.91■□□□□ 0.3
ATG13-211ENST00000528494 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
ATG13-211ENST00000528494 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
ATG13-211ENST00000528494 CPSF1Q10570 1443 aaKnown RBP16.9■□□□□ 0.3
ATG13-211ENST00000528494 XRN1Q8IZH2 1706 aaKnown RBP16.89■□□□□ 0.29
ATG13-211ENST00000528494 USP32Q8NFA0 1604 aa16.89■□□□□ 0.29
ATG13-211ENST00000528494 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
ATG13-211ENST00000528494 NBR1Q14596 966 aa16.88■□□□□ 0.29
ATG13-211ENST00000528494 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
ATG13-211ENST00000528494 PLEKHG3A1L390 1219 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms