RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
SEC16B-208ENST00000528461 ANKRD36BQ8N2N9 1353 aa18.13■□□□□ 0.49
SEC16B-208ENST00000528461 CD163L1Q9NR16 1453 aa18.13■□□□□ 0.49
SEC16B-208ENST00000528461 SHPRHQ149N8 1683 aa18.11■□□□□ 0.49
SEC16B-208ENST00000528461 ERICH6BQ5W0A0 696 aa18.1■□□□□ 0.49
SEC16B-208ENST00000528461 C3P01024 1663 aa18.1■□□□□ 0.49
SEC16B-208ENST00000528461 ABCC11Q96J66 1382 aa18.09■□□□□ 0.49
SEC16B-208ENST00000528461 METP08581 1390 aa18.09■□□□□ 0.49
SEC16B-208ENST00000528461 ESF1Q9H501 851 aaKnown RBP18.09■□□□□ 0.49
SEC16B-208ENST00000528461 PLEKHH1Q9ULM0 1364 aa18.09■□□□□ 0.49
SEC16B-208ENST00000528461 KNDC1Q76NI1 1749 aa18.08■□□□□ 0.49
SEC16B-208ENST00000528461 MINK1Q8N4C8 1332 aaPredicted RBP18.08■□□□□ 0.48
SEC16B-208ENST00000528461 PDE3BQ13370 1112 aa18.08■□□□□ 0.48
SEC16B-208ENST00000528461 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.48
SEC16B-208ENST00000528461 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
SEC16B-208ENST00000528461 A0A1W2PP64 1363 aa18.08■□□□□ 0.48
SEC16B-208ENST00000528461 POLR3AO14802 1390 aaPredicted RBP18.08■□□□□ 0.48
SEC16B-208ENST00000528461 NINLQ9Y2I6 1382 aa18.08■□□□□ 0.48
SEC16B-208ENST00000528461 TMEM2Q9UHN6 1383 aa18.07■□□□□ 0.48
SEC16B-208ENST00000528461 ZNF521Q96K83 1311 aa18.06■□□□□ 0.48
SEC16B-208ENST00000528461 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.06■□□□□ 0.48
SEC16B-208ENST00000528461 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
SEC16B-208ENST00000528461 WAPLQ7Z5K2 1190 aa18.05■□□□□ 0.48
SEC16B-208ENST00000528461 FER1L4A9Z1Z3 1794 aa18.05■□□□□ 0.48
SEC16B-208ENST00000528461 POGKQ9P215 609 aa18.04■□□□□ 0.48
SEC16B-208ENST00000528461 TECPR2O15040 1411 aa18.04■□□□□ 0.48
SEC16B-208ENST00000528461 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
SEC16B-208ENST00000528461 CEBPAP49715 358 aaPredicted RBP18.04■□□□□ 0.48
SEC16B-208ENST00000528461 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
SEC16B-208ENST00000528461 ANKRD26Q9UPS8 1709 aa18.03■□□□□ 0.48
SEC16B-208ENST00000528461 ADAMTS13Q76LX8 1427 aa18.03■□□□□ 0.48
SEC16B-208ENST00000528461 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
SEC16B-208ENST00000528461 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
SEC16B-208ENST00000528461 NSD2O96028 1365 aa18.03■□□□□ 0.48
SEC16B-208ENST00000528461 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
SEC16B-208ENST00000528461 CPS1P31327 1500 aa18.02■□□□□ 0.48
SEC16B-208ENST00000528461 MORC1Q86VD1 984 aa18.02■□□□□ 0.48
SEC16B-208ENST00000528461 MED14O60244 1454 aa18.01■□□□□ 0.47
SEC16B-208ENST00000528461 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
SEC16B-208ENST00000528461 LTKP29376 864 aa18■□□□□ 0.47
SEC16B-208ENST00000528461 TSHZ2Q9NRE2 1034 aa18■□□□□ 0.47
SEC16B-208ENST00000528461 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
SEC16B-208ENST00000528461 ARHGAP23Q9P227 1491 aa17.99■□□□□ 0.47
SEC16B-208ENST00000528461 SLIT1O75093 1534 aa17.99■□□□□ 0.47
SEC16B-208ENST00000528461 SIRT1Q96EB6 747 aa17.99■□□□□ 0.47
SEC16B-208ENST00000528461 TNNT2P45379 298 aaPredicted RBP17.97■□□□□ 0.47
SEC16B-208ENST00000528461 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
SEC16B-208ENST00000528461 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
SEC16B-208ENST00000528461 KIF20BQ96Q89 1820 aa17.97■□□□□ 0.47
SEC16B-208ENST00000528461 FYB1O15117 783 aa17.96■□□□□ 0.47
SEC16B-208ENST00000528461 CABP1Q9NZU7 370 aa17.96■□□□□ 0.47
SEC16B-208ENST00000528461 RCAN3Q9UKA8 241 aa17.96■□□□□ 0.47
SEC16B-208ENST00000528461 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
SEC16B-208ENST00000528461 MTHFSP49914 203 aa17.96■□□□□ 0.47
SEC16B-208ENST00000528461 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
SEC16B-208ENST00000528461 TXNDC2Q86VQ3 553 aa17.96■□□□□ 0.46
SEC16B-208ENST00000528461 ATP7BP35670 1465 aa17.95■□□□□ 0.46
SEC16B-208ENST00000528461 TRMT2AQ8IZ69 625 aaKnown RBP17.95■□□□□ 0.46
SEC16B-208ENST00000528461 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.95■□□□□ 0.46
SEC16B-208ENST00000528461 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
SEC16B-208ENST00000528461 ROBO2Q9HCK4 1378 aa17.94■□□□□ 0.46
SEC16B-208ENST00000528461 COL3A1P02461 1466 aaPredicted RBP17.94■□□□□ 0.46
SEC16B-208ENST00000528461 APAF1O14727 1248 aa17.94■□□□□ 0.46
SEC16B-208ENST00000528461 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
SEC16B-208ENST00000528461 CPSF1Q10570 1443 aaKnown RBP17.94■□□□□ 0.46
SEC16B-208ENST00000528461 TERF2IPQ9NYB0 399 aa17.94■□□□□ 0.46
SEC16B-208ENST00000528461 IQSEC2Q5JU85 1478 aa17.93■□□□□ 0.46
SEC16B-208ENST00000528461 PTPRUQ92729 1446 aa17.93■□□□□ 0.46
SEC16B-208ENST00000528461 WASLO00401 505 aaPredicted RBP17.93■□□□□ 0.46
SEC16B-208ENST00000528461 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
SEC16B-208ENST00000528461 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
SEC16B-208ENST00000528461 ADGRB2O60241 1585 aa17.92■□□□□ 0.46
SEC16B-208ENST00000528461 B4GALNT3Q6L9W6 998 aa17.91■□□□□ 0.46
SEC16B-208ENST00000528461 SLFN5Q08AF3 891 aa17.9■□□□□ 0.46
SEC16B-208ENST00000528461 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
SEC16B-208ENST00000528461 MON2Q7Z3U7 1717 aa17.9■□□□□ 0.46
SEC16B-208ENST00000528461 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
SEC16B-208ENST00000528461 GOLGA2Q08379 1002 aa17.89■□□□□ 0.45
SEC16B-208ENST00000528461 CDC42BPGQ6DT37 1551 aa17.89■□□□□ 0.45
SEC16B-208ENST00000528461 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
SEC16B-208ENST00000528461 PPIP5K1Q6PFW1 1433 aa17.88■□□□□ 0.45
SEC16B-208ENST00000528461 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
SEC16B-208ENST00000528461 TOPAZ1Q8N9V7 1692 aa17.88■□□□□ 0.45
SEC16B-208ENST00000528461 PRR36Q9H6K5 1346 aa17.87■□□□□ 0.45
SEC16B-208ENST00000528461 NCKAP5LQ9HCH0 1330 aa17.87■□□□□ 0.45
SEC16B-208ENST00000528461 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
SEC16B-208ENST00000528461 NGEFQ8N5V2 710 aa17.85■□□□□ 0.45
SEC16B-208ENST00000528461 NUDT16Q96DE0 195 aaKnown RBP17.85■□□□□ 0.45
SEC16B-208ENST00000528461 RIMS1Q86UR5 1692 aaKnown RBP17.85■□□□□ 0.45
SEC16B-208ENST00000528461 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
SEC16B-208ENST00000528461 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
SEC16B-208ENST00000528461 EDC4Q6P2E9 1401 aaKnown RBP17.84■□□□□ 0.45
SEC16B-208ENST00000528461 ADAMTSL3P82987 1691 aa17.84■□□□□ 0.45
SEC16B-208ENST00000528461 WWC1Q8IX03 1113 aa17.84■□□□□ 0.45
SEC16B-208ENST00000528461 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.45
SEC16B-208ENST00000528461 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
SEC16B-208ENST00000528461 ITSN1Q15811 1721 aa17.83■□□□□ 0.44
SEC16B-208ENST00000528461 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
SEC16B-208ENST00000528461 CFAP53Q96M91 514 aa17.83■□□□□ 0.44
SEC16B-208ENST00000528461 TBX22Q9Y458 520 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms