RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 RGL3Q3MIN7 710 aa18■□□□□ 0.47
CHD7-207ENST00000527921 KNDC1Q76NI1 1749 aa17.98■□□□□ 0.47
CHD7-207ENST00000527921 UPF1Q92900 1129 aaKnown RBP eCLIP17.98■□□□□ 0.47
CHD7-207ENST00000527921 LRPPRCP42704 1394 aaKnown RBP17.98■□□□□ 0.47
CHD7-207ENST00000527921 COL22A1Q8NFW1 1626 aaPredicted RBP17.98■□□□□ 0.47
CHD7-207ENST00000527921 ABCC11Q96J66 1382 aa17.97■□□□□ 0.47
CHD7-207ENST00000527921 C8orf37Q96NL8 207 aa17.97■□□□□ 0.47
CHD7-207ENST00000527921 PXDNQ92626 1479 aa17.96■□□□□ 0.47
CHD7-207ENST00000527921 PLEKHH1Q9ULM0 1364 aa17.96■□□□□ 0.47
CHD7-207ENST00000527921 WAPLQ7Z5K2 1190 aa17.96■□□□□ 0.47
CHD7-207ENST00000527921 NRXN1Q9ULB1 1477 aa17.95■□□□□ 0.46
CHD7-207ENST00000527921 TMEM132EQ6IEE7 984 aa17.95■□□□□ 0.46
CHD7-207ENST00000527921 QTRT2Q9H974 415 aaKnown RBP17.94■□□□□ 0.46
CHD7-207ENST00000527921 STK26Q9P289 416 aa17.94■□□□□ 0.46
CHD7-207ENST00000527921 RGS12O14924 1447 aa17.94■□□□□ 0.46
CHD7-207ENST00000527921 MYOM2P54296 1465 aa17.94■□□□□ 0.46
CHD7-207ENST00000527921 YTHDC2Q9H6S0 1430 aaKnown RBP17.93■□□□□ 0.46
CHD7-207ENST00000527921 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
CHD7-207ENST00000527921 ESCO1Q5FWF5 840 aa17.92■□□□□ 0.46
CHD7-207ENST00000527921 NPHP3Q7Z494 1330 aa17.92■□□□□ 0.46
CHD7-207ENST00000527921 RBM6P78332 1123 aaKnown RBP17.91■□□□□ 0.46
CHD7-207ENST00000527921 C14orf93Q9H972 538 aaKnown RBP17.91■□□□□ 0.46
CHD7-207ENST00000527921 FMN2Q9NZ56 1722 aa17.91■□□□□ 0.46
CHD7-207ENST00000527921 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
CHD7-207ENST00000527921 FNBP4Q8N3X1 1017 aaPredicted RBP17.9■□□□□ 0.46
CHD7-207ENST00000527921 SIRT1Q96EB6 747 aa17.9■□□□□ 0.46
CHD7-207ENST00000527921 NGLY1Q96IV0 654 aa17.9■□□□□ 0.46
CHD7-207ENST00000527921 EP400Q96L91 3159 aa17.89■□□□□ 0.45
CHD7-207ENST00000527921 FOXO3O43524 673 aa17.89■□□□□ 0.45
CHD7-207ENST00000527921 RAB3GAP2Q9H2M9 1393 aa17.88■□□□□ 0.45
CHD7-207ENST00000527921 NUTM2FA1L443 756 aa17.87■□□□□ 0.45
CHD7-207ENST00000527921 XPCQ01831 940 aaPredicted RBP17.87■□□□□ 0.45
CHD7-207ENST00000527921 CFAP70Q5T0N1 1121 aa17.87■□□□□ 0.45
CHD7-207ENST00000527921 ATRNO75882 1429 aa17.87■□□□□ 0.45
CHD7-207ENST00000527921 MARF1Q9Y4F3 1742 aaKnown RBP17.86■□□□□ 0.45
CHD7-207ENST00000527921 KIF1AQ12756 1690 aa17.85■□□□□ 0.45
CHD7-207ENST00000527921 BCL9LQ86UU0 1499 aa17.85■□□□□ 0.45
CHD7-207ENST00000527921 USP21Q9UK80 565 aa17.85■□□□□ 0.45
CHD7-207ENST00000527921 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
CHD7-207ENST00000527921 SRCAPQ6ZRS2 3230 aa17.83■□□□□ 0.44
CHD7-207ENST00000527921 TRPC5Q9UL62 973 aaPredicted RBP17.83■□□□□ 0.44
CHD7-207ENST00000527921 ADGRB1O14514 1584 aa17.83■□□□□ 0.44
CHD7-207ENST00000527921 DHX57Q6P158 1386 aaKnown RBP17.82■□□□□ 0.44
CHD7-207ENST00000527921 SPATA31A3Q5VYP0 1347 aa17.82■□□□□ 0.44
CHD7-207ENST00000527921 DLC1Q96QB1 1528 aa17.82■□□□□ 0.44
CHD7-207ENST00000527921 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
CHD7-207ENST00000527921 PRAM1Q96QH2 718 aa17.79■□□□□ 0.44
CHD7-207ENST00000527921 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
CHD7-207ENST00000527921 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
CHD7-207ENST00000527921 SLIT2O94813 1529 aa17.78■□□□□ 0.44
CHD7-207ENST00000527921 KRT28Q7Z3Y7 464 aa17.78■□□□□ 0.44
CHD7-207ENST00000527921 PHF8Q9UPP1 1060 aa17.77■□□□□ 0.44
CHD7-207ENST00000527921 TNS3Q68CZ2 1445 aa17.76■□□□□ 0.43
CHD7-207ENST00000527921 SAFB2Q14151 953 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHD7-207ENST00000527921 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
CHD7-207ENST00000527921 ANKARQ7Z5J8 1434 aa17.74■□□□□ 0.43
CHD7-207ENST00000527921 HRCP23327 699 aa17.74■□□□□ 0.43
CHD7-207ENST00000527921 GJD4Q96KN9 370 aaPredicted RBP17.74■□□□□ 0.43
CHD7-207ENST00000527921 ABCA3Q99758 1704 aa17.74■□□□□ 0.43
CHD7-207ENST00000527921 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
CHD7-207ENST00000527921 GLI3P10071 1580 aa17.74■□□□□ 0.43
CHD7-207ENST00000527921 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
CHD7-207ENST00000527921 UNC5CLQ8IV45 518 aa17.72■□□□□ 0.43
CHD7-207ENST00000527921 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
CHD7-207ENST00000527921 PSME1Q06323 249 aa17.71■□□□□ 0.43
CHD7-207ENST00000527921 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
CHD7-207ENST00000527921 POGKQ9P215 609 aa17.71■□□□□ 0.43
CHD7-207ENST00000527921 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
CHD7-207ENST00000527921 CABLES1Q8TDN4 633 aa17.7■□□□□ 0.42
CHD7-207ENST00000527921 KDM2AQ9Y2K7 1162 aa17.7■□□□□ 0.42
CHD7-207ENST00000527921 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
CHD7-207ENST00000527921 PLCH1Q4KWH8 1693 aa17.69■□□□□ 0.42
CHD7-207ENST00000527921 PMFBP1Q8TBY8 1022 aa17.69■□□□□ 0.42
CHD7-207ENST00000527921 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
CHD7-207ENST00000527921 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
CHD7-207ENST00000527921 ARHGEF10O15013 1369 aa17.68■□□□□ 0.42
CHD7-207ENST00000527921 TULP4Q9NRJ4 1543 aa17.68■□□□□ 0.42
CHD7-207ENST00000527921 ALS2Q96Q42 1657 aa17.68■□□□□ 0.42
CHD7-207ENST00000527921 NWD2Q9ULI1 1742 aa17.68■□□□□ 0.42
CHD7-207ENST00000527921 MINK1Q8N4C8 1332 aaPredicted RBP17.67■□□□□ 0.42
CHD7-207ENST00000527921 ARHGEF28Q8N1W1 1705 aaKnown RBP17.67■□□□□ 0.42
CHD7-207ENST00000527921 BRWD3Q6RI45 1802 aa17.65■□□□□ 0.42
CHD7-207ENST00000527921 WASLO00401 505 aaPredicted RBP17.65■□□□□ 0.42
CHD7-207ENST00000527921 FAM83GA6ND36 823 aa17.64■□□□□ 0.41
CHD7-207ENST00000527921 ONECUT3O60422 494 aaPredicted RBP17.64■□□□□ 0.41
CHD7-207ENST00000527921 VPS72Q15906 364 aa17.64■□□□□ 0.41
CHD7-207ENST00000527921 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
CHD7-207ENST00000527921 NRAPQ86VF7 1730 aa17.63■□□□□ 0.41
CHD7-207ENST00000527921 EIF3AQ14152 1382 aaKnown RBP17.63■□□□□ 0.41
CHD7-207ENST00000527921 LMOD2Q6P5Q4 547 aa17.62■□□□□ 0.41
CHD7-207ENST00000527921 CCDC125Q86Z20 511 aa17.62■□□□□ 0.41
CHD7-207ENST00000527921 ATP7BP35670 1465 aa17.62■□□□□ 0.41
CHD7-207ENST00000527921 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
CHD7-207ENST00000527921 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
CHD7-207ENST00000527921 SEPT12Q8IYM1 358 aa17.6■□□□□ 0.41
CHD7-207ENST00000527921 GPRASP1Q5JY77 1395 aa17.6■□□□□ 0.41
CHD7-207ENST00000527921 KIAA1210Q9ULL0 1709 aa17.59■□□□□ 0.41
CHD7-207ENST00000527921 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.4
CHD7-207ENST00000527921 ITSN1Q15811 1721 aa17.58■□□□□ 0.4
CHD7-207ENST00000527921 BLMP54132 1417 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms