RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 UPF1Q92900 1129 aaKnown RBP eCLIP25.65■■□□□ 1.7
ATM-213ENST00000527891 TECPR2O15040 1411 aa25.64■■□□□ 1.7
ATM-213ENST00000527891 ADAMTS2O95450 1211 aa25.63■■□□□ 1.69
ATM-213ENST00000527891 LRPPRCP42704 1394 aaKnown RBP25.63■■□□□ 1.69
ATM-213ENST00000527891 PIK3C2GO75747 1445 aa25.63■■□□□ 1.69
ATM-213ENST00000527891 STK26Q9P289 416 aa25.62■■□□□ 1.69
ATM-213ENST00000527891 ACIN1Q9UKV3 1341 aaKnown RBP25.62■■□□□ 1.69
ATM-213ENST00000527891 ESCO1Q5FWF5 840 aa25.61■■□□□ 1.69
ATM-213ENST00000527891 QTRT2Q9H974 415 aaKnown RBP25.61■■□□□ 1.69
ATM-213ENST00000527891 NPHP3Q7Z494 1330 aa25.61■■□□□ 1.69
ATM-213ENST00000527891 ABCC11Q96J66 1382 aa25.6■■□□□ 1.69
ATM-213ENST00000527891 RBM6P78332 1123 aaKnown RBP25.6■■□□□ 1.69
ATM-213ENST00000527891 NGLY1Q96IV0 654 aa25.6■■□□□ 1.69
ATM-213ENST00000527891 WAPLQ7Z5K2 1190 aa25.59■■□□□ 1.69
ATM-213ENST00000527891 KNDC1Q76NI1 1749 aa25.58■■□□□ 1.69
ATM-213ENST00000527891 RGS12O14924 1447 aa25.58■■□□□ 1.69
ATM-213ENST00000527891 TMEM132EQ6IEE7 984 aa25.58■■□□□ 1.69
ATM-213ENST00000527891 COL22A1Q8NFW1 1626 aaPredicted RBP25.57■■□□□ 1.68
ATM-213ENST00000527891 PLEKHH1Q9ULM0 1364 aa25.56■■□□□ 1.68
ATM-213ENST00000527891 YTHDC2Q9H6S0 1430 aaKnown RBP25.55■■□□□ 1.68
ATM-213ENST00000527891 PXDNQ92626 1479 aa25.55■■□□□ 1.68
ATM-213ENST00000527891 NUTM2FA1L443 756 aa25.53■■□□□ 1.68
ATM-213ENST00000527891 FOXO3O43524 673 aa25.53■■□□□ 1.68
ATM-213ENST00000527891 USP21Q9UK80 565 aa25.53■■□□□ 1.68
ATM-213ENST00000527891 MYOM2P54296 1465 aa25.53■■□□□ 1.68
ATM-213ENST00000527891 FNBP4Q8N3X1 1017 aaPredicted RBP25.51■■□□□ 1.67
ATM-213ENST00000527891 XPCQ01831 940 aaPredicted RBP25.5■■□□□ 1.67
ATM-213ENST00000527891 C14orf93Q9H972 538 aaKnown RBP25.5■■□□□ 1.67
ATM-213ENST00000527891 TRPC5Q9UL62 973 aaPredicted RBP25.5■■□□□ 1.67
ATM-213ENST00000527891 NRXN1Q9ULB1 1477 aa25.5■■□□□ 1.67
ATM-213ENST00000527891 SIRT1Q96EB6 747 aa25.49■■□□□ 1.67
ATM-213ENST00000527891 FMN2Q9NZ56 1722 aa25.49■■□□□ 1.67
ATM-213ENST00000527891 DHX57Q6P158 1386 aaKnown RBP25.46■■□□□ 1.67
ATM-213ENST00000527891 RAB3GAP2Q9H2M9 1393 aa25.46■■□□□ 1.67
ATM-213ENST00000527891 KIF1AQ12756 1690 aa25.45■■□□□ 1.67
ATM-213ENST00000527891 CFAP70Q5T0N1 1121 aa25.45■■□□□ 1.66
ATM-213ENST00000527891 ATRNO75882 1429 aa25.45■■□□□ 1.66
ATM-213ENST00000527891 BCL9LQ86UU0 1499 aa25.4■■□□□ 1.66
ATM-213ENST00000527891 MARF1Q9Y4F3 1742 aaKnown RBP25.4■■□□□ 1.66
ATM-213ENST00000527891 SPATA31A3Q5VYP0 1347 aa25.4■■□□□ 1.66
ATM-213ENST00000527891 ATAD2Q6PL18 1390 aa25.4■■□□□ 1.66
ATM-213ENST00000527891 PRAM1Q96QH2 718 aa25.39■■□□□ 1.66
ATM-213ENST00000527891 KRT28Q7Z3Y7 464 aa25.38■■□□□ 1.65
ATM-213ENST00000527891 PHF8Q9UPP1 1060 aa25.37■■□□□ 1.65
ATM-213ENST00000527891 DLC1Q96QB1 1528 aa25.37■■□□□ 1.65
ATM-213ENST00000527891 SAFB2Q14151 953 aaKnown RBP eCLIP25.36■■□□□ 1.65
ATM-213ENST00000527891 POGKQ9P215 609 aa25.34■■□□□ 1.65
ATM-213ENST00000527891 TNS3Q68CZ2 1445 aa25.34■■□□□ 1.65
ATM-213ENST00000527891 ADGRB1O14514 1584 aa25.33■■□□□ 1.65
ATM-213ENST00000527891 PSME1Q06323 249 aa25.33■■□□□ 1.65
ATM-213ENST00000527891 GJD4Q96KN9 370 aaPredicted RBP25.33■■□□□ 1.65
ATM-213ENST00000527891 RGPD8O14715 1765 aaPredicted RBP25.32■■□□□ 1.64
ATM-213ENST00000527891 USP32Q8NFA0 1604 aa25.32■■□□□ 1.64
ATM-213ENST00000527891 SLIT2O94813 1529 aa25.32■■□□□ 1.64
ATM-213ENST00000527891 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.32■■□□□ 1.64
ATM-213ENST00000527891 ADGRB2O60241 1585 aa25.31■■□□□ 1.64
ATM-213ENST00000527891 ANKARQ7Z5J8 1434 aa25.3■■□□□ 1.64
ATM-213ENST00000527891 UNC5CLQ8IV45 518 aa25.3■■□□□ 1.64
ATM-213ENST00000527891 SBNO1A3KN83 1393 aa25.3■■□□□ 1.64
ATM-213ENST00000527891 HAP1P54257 671 aaPredicted RBP25.28■■□□□ 1.64
ATM-213ENST00000527891 TRAK1Q9UPV9 953 aa25.28■■□□□ 1.64
ATM-213ENST00000527891 EP400Q96L91 3159 aa25.27■■□□□ 1.64
ATM-213ENST00000527891 DCAF11Q8TEB1 546 aa25.27■■□□□ 1.64
ATM-213ENST00000527891 KDM2AQ9Y2K7 1162 aa25.27■■□□□ 1.64
ATM-213ENST00000527891 ARHGEF10O15013 1369 aa25.26■■□□□ 1.63
ATM-213ENST00000527891 RALGAPBQ86X10 1494 aa25.26■■□□□ 1.63
ATM-213ENST00000527891 PMFBP1Q8TBY8 1022 aa25.25■■□□□ 1.63
ATM-213ENST00000527891 CABLES1Q8TDN4 633 aa25.25■■□□□ 1.63
ATM-213ENST00000527891 STAC3Q96MF2 364 aa25.25■■□□□ 1.63
ATM-213ENST00000527891 GLI3P10071 1580 aa25.24■■□□□ 1.63
ATM-213ENST00000527891 HRCP23327 699 aa25.24■■□□□ 1.63
ATM-213ENST00000527891 LMOD2Q6P5Q4 547 aa25.24■■□□□ 1.63
ATM-213ENST00000527891 HIRIP3Q9BW71 556 aaPredicted RBP25.24■■□□□ 1.63
ATM-213ENST00000527891 EIF3AQ14152 1382 aaKnown RBP25.23■■□□□ 1.63
ATM-213ENST00000527891 MINK1Q8N4C8 1332 aaPredicted RBP25.22■■□□□ 1.63
ATM-213ENST00000527891 PLEKHG5O94827 1062 aa25.22■■□□□ 1.63
ATM-213ENST00000527891 ABCA3Q99758 1704 aa25.2■■□□□ 1.63
ATM-213ENST00000527891 CCDC125Q86Z20 511 aa25.2■■□□□ 1.62
ATM-213ENST00000527891 TULP4Q9NRJ4 1543 aa25.2■■□□□ 1.62
ATM-213ENST00000527891 PRR36Q9H6K5 1346 aa25.18■■□□□ 1.62
ATM-213ENST00000527891 PLCH1Q4KWH8 1693 aa25.18■■□□□ 1.62
ATM-213ENST00000527891 WASLO00401 505 aaPredicted RBP25.18■■□□□ 1.62
ATM-213ENST00000527891 VPS72Q15906 364 aa25.18■■□□□ 1.62
ATM-213ENST00000527891 GPRASP1Q5JY77 1395 aa25.18■■□□□ 1.62
ATM-213ENST00000527891 NWD2Q9ULI1 1742 aa25.17■■□□□ 1.62
ATM-213ENST00000527891 TRPM3Q9HCF6 1732 aaPredicted RBP25.17■■□□□ 1.62
ATM-213ENST00000527891 CCDC9Q9Y3X0 531 aaKnown RBP25.14■■□□□ 1.62
ATM-213ENST00000527891 FAM83GA6ND36 823 aa25.13■■□□□ 1.61
ATM-213ENST00000527891 SEPT12Q8IYM1 358 aa25.13■■□□□ 1.61
ATM-213ENST00000527891 ALS2Q96Q42 1657 aa25.13■■□□□ 1.61
ATM-213ENST00000527891 ARHGEF28Q8N1W1 1705 aaKnown RBP25.12■■□□□ 1.61
ATM-213ENST00000527891 SRCAPQ6ZRS2 3230 aa25.11■■□□□ 1.61
ATM-213ENST00000527891 NGDNQ8NEJ9 315 aaKnown RBP25.11■■□□□ 1.61
ATM-213ENST00000527891 ZRANB1Q9UGI0 708 aa25.11■■□□□ 1.61
ATM-213ENST00000527891 BLMP54132 1417 aaPredicted RBP25.11■■□□□ 1.61
ATM-213ENST00000527891 ONECUT3O60422 494 aaPredicted RBP25.09■■□□□ 1.61
ATM-213ENST00000527891 ATP7BP35670 1465 aa25.09■■□□□ 1.61
ATM-213ENST00000527891 BRWD3Q6RI45 1802 aa25.08■■□□□ 1.61
ATM-213ENST00000527891 BTG4Q9NY30 223 aa25.07■■□□□ 1.6
ATM-213ENST00000527891 NRAPQ86VF7 1730 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms