RNA–Protein interactions for RNA: ENST00000525987.5

SDHD-211, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 4

Gene SDHD, Length 968 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-211ENST00000525987 WAPLQ7Z5K2 1190 aa18.7■□□□□ 0.58
SDHD-211ENST00000525987 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
SDHD-211ENST00000525987 NUTM2BA6NNL0 878 aaPredicted RBP18.69■□□□□ 0.58
SDHD-211ENST00000525987 NUTM2EB1AL46 878 aaPredicted RBP18.69■□□□□ 0.58
SDHD-211ENST00000525987 NUTM2AQ8IVF1 878 aaPredicted RBP18.69■□□□□ 0.58
SDHD-211ENST00000525987 SOS2Q07890 1332 aaPredicted RBP18.69■□□□□ 0.58
SDHD-211ENST00000525987 MYOM2P54296 1465 aa18.68■□□□□ 0.58
SDHD-211ENST00000525987 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
SDHD-211ENST00000525987 YTHDC2Q9H6S0 1430 aaKnown RBP18.67■□□□□ 0.58
SDHD-211ENST00000525987 PXDNQ92626 1479 aa18.67■□□□□ 0.58
SDHD-211ENST00000525987 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
SDHD-211ENST00000525987 STK26Q9P289 416 aa18.67■□□□□ 0.58
SDHD-211ENST00000525987 MEX3CQ5U5Q3 659 aaKnown RBP18.65■□□□□ 0.58
SDHD-211ENST00000525987 C14orf93Q9H972 538 aaKnown RBP18.64■□□□□ 0.57
SDHD-211ENST00000525987 AFF2P51816 1311 aa18.64■□□□□ 0.57
SDHD-211ENST00000525987 ADGRB1O14514 1584 aa18.64■□□□□ 0.57
SDHD-211ENST00000525987 USP32Q8NFA0 1604 aa18.63■□□□□ 0.57
SDHD-211ENST00000525987 CFAP70Q5T0N1 1121 aa18.62■□□□□ 0.57
SDHD-211ENST00000525987 ZNF772Q68DY9 489 aaPredicted RBP18.61■□□□□ 0.57
SDHD-211ENST00000525987 KIF1AQ12756 1690 aa18.6■□□□□ 0.57
SDHD-211ENST00000525987 EP400Q96L91 3159 aa18.59■□□□□ 0.57
SDHD-211ENST00000525987 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
SDHD-211ENST00000525987 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.57
SDHD-211ENST00000525987 ESCO1Q5FWF5 840 aa18.58■□□□□ 0.56
SDHD-211ENST00000525987 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
SDHD-211ENST00000525987 ABCA3Q99758 1704 aa18.57■□□□□ 0.56
SDHD-211ENST00000525987 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
SDHD-211ENST00000525987 XPCQ01831 940 aaPredicted RBP18.57■□□□□ 0.56
SDHD-211ENST00000525987 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
SDHD-211ENST00000525987 C8orf37Q96NL8 207 aa18.57■□□□□ 0.56
SDHD-211ENST00000525987 RGS12O14924 1447 aa18.57■□□□□ 0.56
SDHD-211ENST00000525987 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
SDHD-211ENST00000525987 FOXO3O43524 673 aa18.56■□□□□ 0.56
SDHD-211ENST00000525987 ADAMTS2O95450 1211 aa18.56■□□□□ 0.56
SDHD-211ENST00000525987 ARHGEF28Q8N1W1 1705 aaKnown RBP18.56■□□□□ 0.56
SDHD-211ENST00000525987 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
SDHD-211ENST00000525987 RXRBP28702 533 aa18.54■□□□□ 0.56
SDHD-211ENST00000525987 TRPM3Q9HCF6 1732 aaPredicted RBP18.54■□□□□ 0.56
SDHD-211ENST00000525987 NPHP3Q7Z494 1330 aa18.53■□□□□ 0.56
SDHD-211ENST00000525987 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.52■□□□□ 0.56
SDHD-211ENST00000525987 UPF1Q92900 1129 aaKnown RBP eCLIP18.52■□□□□ 0.561e-6■□□□□ 9.2
SDHD-211ENST00000525987 HRCP23327 699 aa18.51■□□□□ 0.55
SDHD-211ENST00000525987 PRAM1Q96QH2 718 aa18.51■□□□□ 0.55
SDHD-211ENST00000525987 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
SDHD-211ENST00000525987 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
SDHD-211ENST00000525987 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
SDHD-211ENST00000525987 BCL9LQ86UU0 1499 aa18.5■□□□□ 0.55
SDHD-211ENST00000525987 ATRNO75882 1429 aa18.49■□□□□ 0.55
SDHD-211ENST00000525987 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
SDHD-211ENST00000525987 CRYBG1Q9Y4K1 1723 aa18.49■□□□□ 0.55
SDHD-211ENST00000525987 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
SDHD-211ENST00000525987 ALS2Q96Q42 1657 aa18.48■□□□□ 0.55
SDHD-211ENST00000525987 BRWD3Q6RI45 1802 aa18.48■□□□□ 0.55
SDHD-211ENST00000525987 KIAA1210Q9ULL0 1709 aa18.47■□□□□ 0.55
SDHD-211ENST00000525987 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
SDHD-211ENST00000525987 DCAF11Q8TEB1 546 aa18.47■□□□□ 0.55
SDHD-211ENST00000525987 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
SDHD-211ENST00000525987 PLCH1Q4KWH8 1693 aa18.47■□□□□ 0.55
SDHD-211ENST00000525987 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
SDHD-211ENST00000525987 USP21Q9UK80 565 aa18.45■□□□□ 0.54
SDHD-211ENST00000525987 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
SDHD-211ENST00000525987 GLI3P10071 1580 aa18.45■□□□□ 0.54
SDHD-211ENST00000525987 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
SDHD-211ENST00000525987 PHF8Q9UPP1 1060 aa18.44■□□□□ 0.54
SDHD-211ENST00000525987 SLIT2O94813 1529 aa18.44■□□□□ 0.54
SDHD-211ENST00000525987 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
SDHD-211ENST00000525987 ANKARQ7Z5J8 1434 aa18.43■□□□□ 0.54
SDHD-211ENST00000525987 HIRIP3Q9BW71 556 aaPredicted RBP18.42■□□□□ 0.54
SDHD-211ENST00000525987 NWD2Q9ULI1 1742 aa18.42■□□□□ 0.54
SDHD-211ENST00000525987 TULP4Q9NRJ4 1543 aa18.42■□□□□ 0.54
SDHD-211ENST00000525987 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
SDHD-211ENST00000525987 ITSN1Q15811 1721 aa18.41■□□□□ 0.54
SDHD-211ENST00000525987 NRAPQ86VF7 1730 aa18.41■□□□□ 0.54
SDHD-211ENST00000525987 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
SDHD-211ENST00000525987 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
SDHD-211ENST00000525987 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
SDHD-211ENST00000525987 SBNO1A3KN83 1393 aa18.4■□□□□ 0.54
SDHD-211ENST00000525987 POGKQ9P215 609 aa18.39■□□□□ 0.53
SDHD-211ENST00000525987 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
SDHD-211ENST00000525987 SRCAPQ6ZRS2 3230 aa18.39■□□□□ 0.53
SDHD-211ENST00000525987 ATP7BP35670 1465 aa18.38■□□□□ 0.53
SDHD-211ENST00000525987 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
SDHD-211ENST00000525987 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
SDHD-211ENST00000525987 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
SDHD-211ENST00000525987 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
SDHD-211ENST00000525987 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
SDHD-211ENST00000525987 PHRF1Q9P1Y6 1649 aaKnown RBP18.33■□□□□ 0.52
SDHD-211ENST00000525987 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
SDHD-211ENST00000525987 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
SDHD-211ENST00000525987 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
SDHD-211ENST00000525987 PSME1Q06323 249 aa18.31■□□□□ 0.52
SDHD-211ENST00000525987 COL14A1Q05707 1796 aaKnown RBP18.31■□□□□ 0.52
SDHD-211ENST00000525987 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
SDHD-211ENST00000525987 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
SDHD-211ENST00000525987 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
SDHD-211ENST00000525987 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
SDHD-211ENST00000525987 EIF3AQ14152 1382 aaKnown RBP18.28■□□□□ 0.52
SDHD-211ENST00000525987 LMOD2Q6P5Q4 547 aa18.27■□□□□ 0.52
SDHD-211ENST00000525987 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.52
SDHD-211ENST00000525987 CDK19Q9BWU1 502 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms