RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 RXRBP28702 533 aa17.97■□□□□ 0.47
CHKA-203ENST00000525155 UPF1Q92900 1129 aaKnown RBP eCLIP17.97■□□□□ 0.475e-7■□□□□ 9.8
CHKA-203ENST00000525155 LRPPRCP42704 1394 aaKnown RBP17.96■□□□□ 0.47
CHKA-203ENST00000525155 ABCC11Q96J66 1382 aa17.96■□□□□ 0.47
CHKA-203ENST00000525155 C8orf37Q96NL8 207 aa17.96■□□□□ 0.47
CHKA-203ENST00000525155 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
CHKA-203ENST00000525155 PPLO60437 1756 aa17.95■□□□□ 0.46
CHKA-203ENST00000525155 NUTM2FA1L443 756 aa17.95■□□□□ 0.46
CHKA-203ENST00000525155 ADAMTS2O95450 1211 aa17.95■□□□□ 0.46
CHKA-203ENST00000525155 C14orf93Q9H972 538 aaKnown RBP17.95■□□□□ 0.46
CHKA-203ENST00000525155 QTRT2Q9H974 415 aaKnown RBP17.95■□□□□ 0.46
CHKA-203ENST00000525155 FOXO3O43524 673 aa17.94■□□□□ 0.46
CHKA-203ENST00000525155 ESCO1Q5FWF5 840 aa17.94■□□□□ 0.46
CHKA-203ENST00000525155 CFAP70Q5T0N1 1121 aa17.94■□□□□ 0.46
CHKA-203ENST00000525155 TECPR2O15040 1411 aa17.94■□□□□ 0.46
CHKA-203ENST00000525155 PIK3C2GO75747 1445 aa17.93■□□□□ 0.46
CHKA-203ENST00000525155 XPCQ01831 940 aaPredicted RBP17.93■□□□□ 0.46
CHKA-203ENST00000525155 LAMC1P11047 1609 aa17.9■□□□□ 0.46
CHKA-203ENST00000525155 SIRT1Q96EB6 747 aa17.9■□□□□ 0.46
CHKA-203ENST00000525155 NGLY1Q96IV0 654 aa17.9■□□□□ 0.46
CHKA-203ENST00000525155 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.45
CHKA-203ENST00000525155 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.45
CHKA-203ENST00000525155 RBM6P78332 1123 aaKnown RBP17.88■□□□□ 0.45
CHKA-203ENST00000525155 PXDNQ92626 1479 aa17.87■□□□□ 0.45
CHKA-203ENST00000525155 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
CHKA-203ENST00000525155 NPHP3Q7Z494 1330 aa17.86■□□□□ 0.45
CHKA-203ENST00000525155 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
CHKA-203ENST00000525155 CDC42BPGQ6DT37 1551 aa17.84■□□□□ 0.45
CHKA-203ENST00000525155 MYOM2P54296 1465 aa17.84■□□□□ 0.45
CHKA-203ENST00000525155 RGS12O14924 1447 aa17.84■□□□□ 0.45
CHKA-203ENST00000525155 USP21Q9UK80 565 aa17.84■□□□□ 0.45
CHKA-203ENST00000525155 PRAM1Q96QH2 718 aa17.83■□□□□ 0.44
CHKA-203ENST00000525155 IFT172Q9UG01 1749 aa17.83■□□□□ 0.44
CHKA-203ENST00000525155 SAFB2Q14151 953 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHKA-203ENST00000525155 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
CHKA-203ENST00000525155 SPATA31A3Q5VYP0 1347 aa17.81■□□□□ 0.44
CHKA-203ENST00000525155 KRT28Q7Z3Y7 464 aa17.81■□□□□ 0.44
CHKA-203ENST00000525155 BCL9LQ86UU0 1499 aa17.81■□□□□ 0.44
CHKA-203ENST00000525155 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
CHKA-203ENST00000525155 TRPC5Q9UL62 973 aaPredicted RBP17.79■□□□□ 0.44
CHKA-203ENST00000525155 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
CHKA-203ENST00000525155 ATRNO75882 1429 aa17.79■□□□□ 0.44
CHKA-203ENST00000525155 PHF8Q9UPP1 1060 aa17.78■□□□□ 0.44
CHKA-203ENST00000525155 CABLES1Q8TDN4 633 aa17.77■□□□□ 0.44
CHKA-203ENST00000525155 TRAK1Q9UPV9 953 aa17.77■□□□□ 0.44
CHKA-203ENST00000525155 COL22A1Q8NFW1 1626 aaPredicted RBP17.76■□□□□ 0.43
CHKA-203ENST00000525155 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
CHKA-203ENST00000525155 ADGRB1O14514 1584 aa17.74■□□□□ 0.43
CHKA-203ENST00000525155 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
CHKA-203ENST00000525155 HIRIP3Q9BW71 556 aaPredicted RBP17.74■□□□□ 0.43
CHKA-203ENST00000525155 KNDC1Q76NI1 1749 aa17.74■□□□□ 0.43
CHKA-203ENST00000525155 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
CHKA-203ENST00000525155 GJD4Q96KN9 370 aaPredicted RBP17.73■□□□□ 0.43
CHKA-203ENST00000525155 POGKQ9P215 609 aa17.73■□□□□ 0.43
CHKA-203ENST00000525155 FMN2Q9NZ56 1722 aa17.72■□□□□ 0.43
CHKA-203ENST00000525155 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
CHKA-203ENST00000525155 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
CHKA-203ENST00000525155 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
CHKA-203ENST00000525155 SLIT2O94813 1529 aa17.7■□□□□ 0.42
CHKA-203ENST00000525155 MINK1Q8N4C8 1332 aaPredicted RBP17.7■□□□□ 0.42
CHKA-203ENST00000525155 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
CHKA-203ENST00000525155 PSME1Q06323 249 aa17.69■□□□□ 0.42
CHKA-203ENST00000525155 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
CHKA-203ENST00000525155 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
CHKA-203ENST00000525155 WASLO00401 505 aaPredicted RBP17.68■□□□□ 0.42
CHKA-203ENST00000525155 TNS3Q68CZ2 1445 aa17.67■□□□□ 0.42
CHKA-203ENST00000525155 EP400Q96L91 3159 aa17.67■□□□□ 0.42
CHKA-203ENST00000525155 STAC3Q96MF2 364 aa17.66■□□□□ 0.42
CHKA-203ENST00000525155 USP32Q8NFA0 1604 aa17.65■□□□□ 0.42
CHKA-203ENST00000525155 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
CHKA-203ENST00000525155 ANKARQ7Z5J8 1434 aa17.64■□□□□ 0.42
CHKA-203ENST00000525155 RALGAPBQ86X10 1494 aa17.64■□□□□ 0.41
CHKA-203ENST00000525155 RGPD8O14715 1765 aaPredicted RBP17.64■□□□□ 0.41
CHKA-203ENST00000525155 ONECUT3O60422 494 aaPredicted RBP17.64■□□□□ 0.41
CHKA-203ENST00000525155 NBPF1Q3BBV0 1214 aa17.64■□□□□ 0.41
CHKA-203ENST00000525155 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
CHKA-203ENST00000525155 VPS72Q15906 364 aa17.62■□□□□ 0.41
CHKA-203ENST00000525155 KIF1AQ12756 1690 aa17.61■□□□□ 0.41
CHKA-203ENST00000525155 GLI3P10071 1580 aa17.61■□□□□ 0.41
CHKA-203ENST00000525155 SEPT12Q8IYM1 358 aa17.6■□□□□ 0.41
CHKA-203ENST00000525155 NUDT16Q96DE0 195 aaKnown RBP17.6■□□□□ 0.41
CHKA-203ENST00000525155 ADGRB2O60241 1585 aa17.59■□□□□ 0.41
CHKA-203ENST00000525155 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
CHKA-203ENST00000525155 CDK19Q9BWU1 502 aa17.59■□□□□ 0.41
CHKA-203ENST00000525155 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.4
CHKA-203ENST00000525155 HAP1P54257 671 aaPredicted RBP17.58■□□□□ 0.4
CHKA-203ENST00000525155 NGDNQ8NEJ9 315 aaKnown RBP17.57■□□□□ 0.4
CHKA-203ENST00000525155 MARF1Q9Y4F3 1742 aaKnown RBP17.57■□□□□ 0.4
CHKA-203ENST00000525155 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
CHKA-203ENST00000525155 TULP4Q9NRJ4 1543 aa17.56■□□□□ 0.4
CHKA-203ENST00000525155 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
CHKA-203ENST00000525155 NBPF8Q3BBV2 869 aa17.54■□□□□ 0.4
CHKA-203ENST00000525155 DEFB132Q7Z7B7 95 aa17.54■□□□□ 0.4
CHKA-203ENST00000525155 CCDC125Q86Z20 511 aa17.54■□□□□ 0.4
CHKA-203ENST00000525155 TRPM3Q9HCF6 1732 aaPredicted RBP17.53■□□□□ 0.4
CHKA-203ENST00000525155 ATP7BP35670 1465 aa17.53■□□□□ 0.4
CHKA-203ENST00000525155 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
CHKA-203ENST00000525155 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
CHKA-203ENST00000525155 NUTM2GQ5VZR2 741 aa17.52■□□□□ 0.4
CHKA-203ENST00000525155 L3MBTL2Q969R5 705 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms