RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ORAI2Q96SN7 254 aa27.14■■□□□ 1.94
CAPN1-203ENST00000525013 LAMC1P11047 1609 aa27.14■■□□□ 1.94
CAPN1-203ENST00000525013 MEX3CQ5U5Q3 659 aaKnown RBP27.13■■□□□ 1.93
CAPN1-203ENST00000525013 DHX57Q6P158 1386 aaKnown RBP27.12■■□□□ 1.93
CAPN1-203ENST00000525013 PLEKHH1Q9ULM0 1364 aa27.12■■□□□ 1.93
CAPN1-203ENST00000525013 DCAF11Q8TEB1 546 aa27.12■■□□□ 1.93
CAPN1-203ENST00000525013 LRRC59Q96AG4 307 aaKnown RBP27.12■■□□□ 1.93
CAPN1-203ENST00000525013 CDC42BPGQ6DT37 1551 aa27.11■■□□□ 1.93
CAPN1-203ENST00000525013 NUTM2BA6NNL0 878 aaPredicted RBP27.1■■□□□ 1.93
CAPN1-203ENST00000525013 NUTM2EB1AL46 878 aaPredicted RBP27.1■■□□□ 1.93
CAPN1-203ENST00000525013 NUTM2AQ8IVF1 878 aaPredicted RBP27.1■■□□□ 1.93
CAPN1-203ENST00000525013 LRP6O75581 1613 aa27.09■■□□□ 1.93
CAPN1-203ENST00000525013 NUTM2FA1L443 756 aa27.08■■□□□ 1.93
CAPN1-203ENST00000525013 ESCO1Q5FWF5 840 aa27.08■■□□□ 1.93
CAPN1-203ENST00000525013 POTEAQ6S8J7 498 aa27.07■■□□□ 1.92
CAPN1-203ENST00000525013 SIRT1Q96EB6 747 aa27.06■■□□□ 1.92
CAPN1-203ENST00000525013 SAFB2Q14151 953 aaKnown RBP eCLIP27.03■■□□□ 1.92
CAPN1-203ENST00000525013 STAC3Q96MF2 364 aa27.03■■□□□ 1.92
CAPN1-203ENST00000525013 PRAM1Q96QH2 718 aa27.03■■□□□ 1.92
CAPN1-203ENST00000525013 POGKQ9P215 609 aa27.02■■□□□ 1.92
CAPN1-203ENST00000525013 PNPLA6Q8IY17 1366 aa27.01■■□□□ 1.91
CAPN1-203ENST00000525013 SOS2Q07890 1332 aaPredicted RBP27.01■■□□□ 1.91
CAPN1-203ENST00000525013 FMN2Q9NZ56 1722 aa26.99■■□□□ 1.91
CAPN1-203ENST00000525013 TRAK1Q9UPV9 953 aa26.99■■□□□ 1.91
CAPN1-203ENST00000525013 NPHP3Q7Z494 1330 aa26.98■■□□□ 1.91
CAPN1-203ENST00000525013 FOXO3O43524 673 aa26.98■■□□□ 1.91
CAPN1-203ENST00000525013 ADGRB1O14514 1584 aa26.97■■□□□ 1.91
CAPN1-203ENST00000525013 DLC1Q96QB1 1528 aa26.96■■□□□ 1.91
CAPN1-203ENST00000525013 ZNF772Q68DY9 489 aaPredicted RBP26.96■■□□□ 1.91
CAPN1-203ENST00000525013 XPCQ01831 940 aaPredicted RBP26.95■■□□□ 1.9
CAPN1-203ENST00000525013 RGPD8O14715 1765 aaPredicted RBP26.94■■□□□ 1.9
CAPN1-203ENST00000525013 C8orf37Q96NL8 207 aa26.92■■□□□ 1.9
CAPN1-203ENST00000525013 ADAMTS2O95450 1211 aa26.91■■□□□ 1.9
CAPN1-203ENST00000525013 PXDNQ92626 1479 aa26.9■■□□□ 1.9
CAPN1-203ENST00000525013 AFF2P51816 1311 aa26.9■■□□□ 1.9
CAPN1-203ENST00000525013 HIRIP3Q9BW71 556 aaPredicted RBP26.89■■□□□ 1.9
CAPN1-203ENST00000525013 KIF1AQ12756 1690 aa26.89■■□□□ 1.89
CAPN1-203ENST00000525013 MINK1Q8N4C8 1332 aaPredicted RBP26.88■■□□□ 1.89
CAPN1-203ENST00000525013 PHF8Q9UPP1 1060 aa26.87■■□□□ 1.89
CAPN1-203ENST00000525013 NGLY1Q96IV0 654 aa26.85■■□□□ 1.89
CAPN1-203ENST00000525013 KRT28Q7Z3Y7 464 aa26.84■■□□□ 1.89
CAPN1-203ENST00000525013 COL22A1Q8NFW1 1626 aaPredicted RBP26.83■■□□□ 1.89
CAPN1-203ENST00000525013 ADGRB2O60241 1585 aa26.83■■□□□ 1.89
CAPN1-203ENST00000525013 ARHGEF28Q8N1W1 1705 aaKnown RBP26.82■■□□□ 1.88
CAPN1-203ENST00000525013 KIAA1210Q9ULL0 1709 aa26.82■■□□□ 1.88
CAPN1-203ENST00000525013 RXRBP28702 533 aa26.81■■□□□ 1.88
CAPN1-203ENST00000525013 SIN3AQ96ST3 1273 aa26.81■■□□□ 1.88
CAPN1-203ENST00000525013 ANKARQ7Z5J8 1434 aa26.8■■□□□ 1.88
CAPN1-203ENST00000525013 USP32Q8NFA0 1604 aa26.79■■□□□ 1.88
CAPN1-203ENST00000525013 PSME1Q06323 249 aa26.79■■□□□ 1.88
CAPN1-203ENST00000525013 NEUROD1Q13562 356 aa26.79■■□□□ 1.88
CAPN1-203ENST00000525013 PMFBP1Q8TBY8 1022 aa26.79■■□□□ 1.88
CAPN1-203ENST00000525013 WASLO00401 505 aaPredicted RBP26.78■■□□□ 1.88
CAPN1-203ENST00000525013 NBPF1Q3BBV0 1214 aa26.78■■□□□ 1.88
CAPN1-203ENST00000525013 QTRT2Q9H974 415 aaKnown RBP26.78■■□□□ 1.88
CAPN1-203ENST00000525013 SPATA31A3Q5VYP0 1347 aa26.78■■□□□ 1.88
CAPN1-203ENST00000525013 EIF3AQ14152 1382 aaKnown RBP26.78■■□□□ 1.88
CAPN1-203ENST00000525013 L3MBTL2Q969R5 705 aa26.77■■□□□ 1.88
CAPN1-203ENST00000525013 LMOD2Q6P5Q4 547 aa26.75■■□□□ 1.87
CAPN1-203ENST00000525013 TULP4Q9NRJ4 1543 aa26.74■■□□□ 1.87
CAPN1-203ENST00000525013 PRR36Q9H6K5 1346 aa26.73■■□□□ 1.87
CAPN1-203ENST00000525013 USP21Q9UK80 565 aa26.73■■□□□ 1.87
CAPN1-203ENST00000525013 MARF1Q9Y4F3 1742 aaKnown RBP26.73■■□□□ 1.87
CAPN1-203ENST00000525013 PLEKHG5O94827 1062 aa26.72■■□□□ 1.87
CAPN1-203ENST00000525013 TNS3Q68CZ2 1445 aa26.72■■□□□ 1.87
CAPN1-203ENST00000525013 HAP1P54257 671 aaPredicted RBP26.71■■□□□ 1.87
CAPN1-203ENST00000525013 RBM6P78332 1123 aaKnown RBP26.7■■□□□ 1.86
CAPN1-203ENST00000525013 TRIM26Q12899 539 aaPredicted RBP26.7■■□□□ 1.86
CAPN1-203ENST00000525013 SBNO1A3KN83 1393 aa26.7■■□□□ 1.86
CAPN1-203ENST00000525013 FNBP4Q8N3X1 1017 aaPredicted RBP26.69■■□□□ 1.86
CAPN1-203ENST00000525013 NGDNQ8NEJ9 315 aaKnown RBP26.68■■□□□ 1.86
CAPN1-203ENST00000525013 CDK19Q9BWU1 502 aa26.68■■□□□ 1.86
CAPN1-203ENST00000525013 GPRASP1Q5JY77 1395 aa26.68■■□□□ 1.86
CAPN1-203ENST00000525013 NUDT16Q96DE0 195 aaKnown RBP26.67■■□□□ 1.86
CAPN1-203ENST00000525013 ITSN1Q15811 1721 aa26.66■■□□□ 1.86
CAPN1-203ENST00000525013 CABLES1Q8TDN4 633 aa26.66■■□□□ 1.86
CAPN1-203ENST00000525013 TRPC5Q9UL62 973 aaPredicted RBP26.66■■□□□ 1.86
CAPN1-203ENST00000525013 ARHGEF10O15013 1369 aa26.66■■□□□ 1.86
CAPN1-203ENST00000525013 CDK12Q9NYV4 1490 aaPredicted RBP26.66■■□□□ 1.86
CAPN1-203ENST00000525013 CENPJQ9HC77 1338 aaPredicted RBP26.63■■□□□ 1.85
CAPN1-203ENST00000525013 ATP7BP35670 1465 aa26.62■■□□□ 1.85
CAPN1-203ENST00000525013 TRPM3Q9HCF6 1732 aaPredicted RBP26.62■■□□□ 1.85
CAPN1-203ENST00000525013 PAK3O75914 559 aaPredicted RBP26.61■■□□□ 1.85
CAPN1-203ENST00000525013 RGS12O14924 1447 aa26.6■■□□□ 1.85
CAPN1-203ENST00000525013 TRPM1Q7Z4N2 1603 aa26.6■■□□□ 1.85
CAPN1-203ENST00000525013 BCL9LQ86UU0 1499 aa26.6■■□□□ 1.85
CAPN1-203ENST00000525013 ATRNO75882 1429 aa26.59■■□□□ 1.85
CAPN1-203ENST00000525013 QRICH2Q9H0J4 1663 aa26.58■■□□□ 1.85
CAPN1-203ENST00000525013 ABCA3Q99758 1704 aa26.57■■□□□ 1.84
CAPN1-203ENST00000525013 SRPK2P78362 688 aaKnown RBP26.57■■□□□ 1.84
CAPN1-203ENST00000525013 CCDC61Q9Y6R9 512 aa26.57■■□□□ 1.84
CAPN1-203ENST00000525013 ROCK2O75116 1388 aaKnown RBP26.57■■□□□ 1.84
CAPN1-203ENST00000525013 ALS2Q96Q42 1657 aa26.57■■□□□ 1.84
CAPN1-203ENST00000525013 UNC5CLQ8IV45 518 aa26.55■■□□□ 1.84
CAPN1-203ENST00000525013 UPF1Q92900 1129 aaKnown RBP eCLIP26.54■■□□□ 1.84
CAPN1-203ENST00000525013 SLIT2O94813 1529 aa26.54■■□□□ 1.84
CAPN1-203ENST00000525013 TOPAZ1Q8N9V7 1692 aa26.54■■□□□ 1.84
CAPN1-203ENST00000525013 CABP2Q9NPB3 220 aa26.53■■□□□ 1.84
CAPN1-203ENST00000525013 ACEP12821 1306 aa26.53■■□□□ 1.84
CAPN1-203ENST00000525013 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms