RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 INSRP06213 1382 aa26.04■■□□□ 1.76
TM9SF1-203ENST00000524835 METP08581 1390 aa26.04■■□□□ 1.76
TM9SF1-203ENST00000524835 MINK1Q8N4C8 1332 aaPredicted RBP26.03■■□□□ 1.76
TM9SF1-203ENST00000524835 ANKRD36BQ8N2N9 1353 aa26.02■■□□□ 1.76
TM9SF1-203ENST00000524835 NINLQ9Y2I6 1382 aa26.02■■□□□ 1.76
TM9SF1-203ENST00000524835 KNDC1Q76NI1 1749 aa26.01■■□□□ 1.75
TM9SF1-203ENST00000524835 BLMP54132 1417 aaPredicted RBP26■■□□□ 1.75
TM9SF1-203ENST00000524835 ATAD2Q6PL18 1390 aa25.99■■□□□ 1.75
TM9SF1-203ENST00000524835 SLIT1O75093 1534 aa25.99■■□□□ 1.75
TM9SF1-203ENST00000524835 TECPR2O15040 1411 aa25.99■■□□□ 1.75
TM9SF1-203ENST00000524835 ADAMTS13Q76LX8 1427 aa25.99■■□□□ 1.75
TM9SF1-203ENST00000524835 PLEKHH1Q9ULM0 1364 aa25.99■■□□□ 1.75
TM9SF1-203ENST00000524835 SRPK2P78362 688 aaKnown RBP25.98■■□□□ 1.75
TM9SF1-203ENST00000524835 ARHGAP23Q9P227 1491 aa25.98■■□□□ 1.75
TM9SF1-203ENST00000524835 PLEKHG1Q9ULL1 1385 aa25.98■■□□□ 1.75
TM9SF1-203ENST00000524835 LTKP29376 864 aa25.96■■□□□ 1.75
TM9SF1-203ENST00000524835 CPS1P31327 1500 aa25.96■■□□□ 1.75
TM9SF1-203ENST00000524835 WAPLQ7Z5K2 1190 aa25.96■■□□□ 1.75
TM9SF1-203ENST00000524835 SMG6Q86US8 1419 aaKnown RBP25.94■■□□□ 1.74
TM9SF1-203ENST00000524835 FAM135BQ49AJ0 1406 aa25.94■■□□□ 1.74
TM9SF1-203ENST00000524835 A0A1W2PP64 1363 aa25.94■■□□□ 1.74
TM9SF1-203ENST00000524835 FKBP8Q14318 412 aa25.93■■□□□ 1.74
TM9SF1-203ENST00000524835 MED14O60244 1454 aa25.92■■□□□ 1.74
TM9SF1-203ENST00000524835 CD163L1Q9NR16 1453 aa25.92■■□□□ 1.74
TM9SF1-203ENST00000524835 CDK19Q9BWU1 502 aa25.92■■□□□ 1.74
TM9SF1-203ENST00000524835 CGNL1Q0VF96 1302 aa25.92■■□□□ 1.74
TM9SF1-203ENST00000524835 SENP3-EIF4A1A0A087X0R7 540 aa25.92■■□□□ 1.74
TM9SF1-203ENST00000524835 SIRT1Q96EB6 747 aa25.92■■□□□ 1.74
TM9SF1-203ENST00000524835 RIMS1Q86UR5 1692 aaKnown RBP25.91■■□□□ 1.74
TM9SF1-203ENST00000524835 NEFLP07196 543 aa25.91■■□□□ 1.74
TM9SF1-203ENST00000524835 PLPPR3Q6T4P5 718 aa25.91■■□□□ 1.74
TM9SF1-203ENST00000524835 TXNDC2Q86VQ3 553 aa25.9■■□□□ 1.74
TM9SF1-203ENST00000524835 NSD2O96028 1365 aa25.9■■□□□ 1.74
TM9SF1-203ENST00000524835 BCANQ96GW7 911 aa25.9■■□□□ 1.74
TM9SF1-203ENST00000524835 ADAMTS8Q9UP79 889 aa25.88■■□□□ 1.73
TM9SF1-203ENST00000524835 ADAMTSL3P82987 1691 aa25.87■■□□□ 1.73
TM9SF1-203ENST00000524835 MORC1Q86VD1 984 aa25.87■■□□□ 1.73
TM9SF1-203ENST00000524835 EID1Q9Y6B2 187 aa25.87■■□□□ 1.73
TM9SF1-203ENST00000524835 NUDCQ9Y266 331 aa25.86■■□□□ 1.73
TM9SF1-203ENST00000524835 CEP170BQ9Y4F5 1589 aaPredicted RBP25.85■■□□□ 1.73
TM9SF1-203ENST00000524835 WDR43Q15061 677 aaKnown RBP eCLIP25.85■■□□□ 1.73
TM9SF1-203ENST00000524835 THEMISQ8N1K5 641 aaPredicted RBP25.85■■□□□ 1.73
TM9SF1-203ENST00000524835 TERF2IPQ9NYB0 399 aa25.84■■□□□ 1.73
TM9SF1-203ENST00000524835 POLR3AO14802 1390 aaPredicted RBP25.84■■□□□ 1.73
TM9SF1-203ENST00000524835 ROBO2Q9HCK4 1378 aa25.84■■□□□ 1.73
TM9SF1-203ENST00000524835 WASLO00401 505 aaPredicted RBP25.82■■□□□ 1.72
TM9SF1-203ENST00000524835 ATP7BP35670 1465 aa25.82■■□□□ 1.72
TM9SF1-203ENST00000524835 CABP1Q9NZU7 370 aa25.8■■□□□ 1.72
TM9SF1-203ENST00000524835 PTPRUQ92729 1446 aa25.8■■□□□ 1.72
TM9SF1-203ENST00000524835 DIP2AQ14689 1571 aa25.8■■□□□ 1.72
TM9SF1-203ENST00000524835 SLC26A8Q96RN1 970 aa25.79■■□□□ 1.72
TM9SF1-203ENST00000524835 ADGRB2O60241 1585 aa25.79■■□□□ 1.72
TM9SF1-203ENST00000524835 ANKRD26Q9UPS8 1709 aa25.78■■□□□ 1.72
TM9SF1-203ENST00000524835 HDGFL2Q7Z4V5 671 aaPredicted RBP25.78■■□□□ 1.72
TM9SF1-203ENST00000524835 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
TM9SF1-203ENST00000524835 SHPRHQ149N8 1683 aa25.77■■□□□ 1.72
TM9SF1-203ENST00000524835 TNNT2P45379 298 aaPredicted RBP25.77■■□□□ 1.72
TM9SF1-203ENST00000524835 PDE3BQ13370 1112 aa25.77■■□□□ 1.72
TM9SF1-203ENST00000524835 TBX22Q9Y458 520 aa25.77■■□□□ 1.72
TM9SF1-203ENST00000524835 SALL2Q9Y467 1007 aaPredicted RBP25.76■■□□□ 1.72
TM9SF1-203ENST00000524835 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.76■■□□□ 1.71
TM9SF1-203ENST00000524835 PPIP5K1Q6PFW1 1433 aa25.74■■□□□ 1.71
TM9SF1-203ENST00000524835 FYB1O15117 783 aa25.73■■□□□ 1.71
TM9SF1-203ENST00000524835 CPSF1Q10570 1443 aaKnown RBP25.73■■□□□ 1.71
TM9SF1-203ENST00000524835 KIF20BQ96Q89 1820 aa25.73■■□□□ 1.71
TM9SF1-203ENST00000524835 PTCH1Q13635 1447 aa25.72■■□□□ 1.71
TM9SF1-203ENST00000524835 GGNBP2Q9H3C7 697 aa25.72■■□□□ 1.71
TM9SF1-203ENST00000524835 MTHFSP49914 203 aa25.71■■□□□ 1.71
TM9SF1-203ENST00000524835 CDC42BPGQ6DT37 1551 aa25.71■■□□□ 1.71
TM9SF1-203ENST00000524835 NUDT16Q96DE0 195 aaKnown RBP25.71■■□□□ 1.71
TM9SF1-203ENST00000524835 RNF123Q5XPI4 1314 aa25.7■■□□□ 1.7
TM9SF1-203ENST00000524835 XRN1Q8IZH2 1706 aaKnown RBP25.7■■□□□ 1.7
TM9SF1-203ENST00000524835 IRX6P78412 446 aaPredicted RBP25.69■■□□□ 1.7
TM9SF1-203ENST00000524835 AMOTL2Q9Y2J4 779 aa25.69■■□□□ 1.7
TM9SF1-203ENST00000524835 PRR36Q9H6K5 1346 aa25.67■■□□□ 1.7
TM9SF1-203ENST00000524835 CCDC61Q9Y6R9 512 aa25.67■■□□□ 1.7
TM9SF1-203ENST00000524835 CDCA7LQ96GN5 454 aa25.67■■□□□ 1.7
TM9SF1-203ENST00000524835 MON2Q7Z3U7 1717 aa25.66■■□□□ 1.7
TM9SF1-203ENST00000524835 EDC4Q6P2E9 1401 aaKnown RBP25.66■■□□□ 1.7
TM9SF1-203ENST00000524835 ZNF521Q96K83 1311 aa25.66■■□□□ 1.7
TM9SF1-203ENST00000524835 CCDC146Q8IYE0 955 aa25.66■■□□□ 1.7
TM9SF1-203ENST00000524835 TOPAZ1Q8N9V7 1692 aa25.66■■□□□ 1.7
TM9SF1-203ENST00000524835 NCKAP5LQ9HCH0 1330 aa25.65■■□□□ 1.7
TM9SF1-203ENST00000524835 ERICH6BQ5W0A0 696 aa25.65■■□□□ 1.7
TM9SF1-203ENST00000524835 CFAP53Q96M91 514 aa25.65■■□□□ 1.7
TM9SF1-203ENST00000524835 AKAP12Q02952 1782 aa25.64■■□□□ 1.7
TM9SF1-203ENST00000524835 SETD1BQ9UPS6 1966 aaKnown RBP25.64■■□□□ 1.7
TM9SF1-203ENST00000524835 PIK3R4Q99570 1358 aa25.64■■□□□ 1.69
TM9SF1-203ENST00000524835 ITSN1Q15811 1721 aa25.62■■□□□ 1.69
TM9SF1-203ENST00000524835 COL3A1P02461 1466 aaPredicted RBP25.62■■□□□ 1.69
TM9SF1-203ENST00000524835 APAF1O14727 1248 aa25.61■■□□□ 1.69
TM9SF1-203ENST00000524835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.61■■□□□ 1.69
TM9SF1-203ENST00000524835 ANKLE2Q86XL3 938 aa25.59■■□□□ 1.69
TM9SF1-203ENST00000524835 IQSEC2Q5JU85 1478 aa25.57■■□□□ 1.68
TM9SF1-203ENST00000524835 NGEFQ8N5V2 710 aa25.57■■□□□ 1.68
TM9SF1-203ENST00000524835 NKTRP30414 1462 aaKnown RBP25.56■■□□□ 1.68
TM9SF1-203ENST00000524835 NRKQ7Z2Y5 1582 aa25.56■■□□□ 1.68
TM9SF1-203ENST00000524835 RCAN3Q9UKA8 241 aa25.55■■□□□ 1.68
TM9SF1-203ENST00000524835 PNPLA6Q8IY17 1366 aa25.55■■□□□ 1.68
TM9SF1-203ENST00000524835 KCNA6P17658 529 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms