RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 YTHDC2Q9H6S0 1430 aaKnown RBP28.84■■■□□ 2.21
NDUFS3-202ENST00000524568 ABCC11Q96J66 1382 aa28.82■■■□□ 2.2
NDUFS3-202ENST00000524568 NUTM2BA6NNL0 878 aaPredicted RBP28.81■■■□□ 2.2
NDUFS3-202ENST00000524568 NUTM2EB1AL46 878 aaPredicted RBP28.81■■■□□ 2.2
NDUFS3-202ENST00000524568 CFAP70Q5T0N1 1121 aa28.81■■■□□ 2.2
NDUFS3-202ENST00000524568 NUTM2AQ8IVF1 878 aaPredicted RBP28.81■■■□□ 2.2
NDUFS3-202ENST00000524568 PNPLA6Q8IY17 1366 aa28.8■■■□□ 2.2
NDUFS3-202ENST00000524568 FMN2Q9NZ56 1722 aa28.8■■■□□ 2.2
NDUFS3-202ENST00000524568 C14orf93Q9H972 538 aaKnown RBP28.79■■■□□ 2.2
NDUFS3-202ENST00000524568 MEX3CQ5U5Q3 659 aaKnown RBP28.77■■■□□ 2.2
NDUFS3-202ENST00000524568 RGPD8O14715 1765 aaPredicted RBP28.77■■■□□ 2.2
NDUFS3-202ENST00000524568 NUTM2FA1L443 756 aa28.75■■■□□ 2.19
NDUFS3-202ENST00000524568 LRRC59Q96AG4 307 aaKnown RBP28.75■■■□□ 2.19
NDUFS3-202ENST00000524568 SOS2Q07890 1332 aaPredicted RBP28.74■■■□□ 2.19
NDUFS3-202ENST00000524568 ADGRB1O14514 1584 aa28.74■■■□□ 2.19
NDUFS3-202ENST00000524568 HRCP23327 699 aa28.73■■■□□ 2.19
NDUFS3-202ENST00000524568 PXDNQ92626 1479 aa28.71■■■□□ 2.19
NDUFS3-202ENST00000524568 ESCO1Q5FWF5 840 aa28.7■■■□□ 2.18
NDUFS3-202ENST00000524568 DHX57Q6P158 1386 aaKnown RBP28.68■■■□□ 2.18
NDUFS3-202ENST00000524568 KDM2AQ9Y2K7 1162 aa28.68■■■□□ 2.18
NDUFS3-202ENST00000524568 COL22A1Q8NFW1 1626 aaPredicted RBP28.68■■■□□ 2.18
NDUFS3-202ENST00000524568 XPCQ01831 940 aaPredicted RBP28.67■■■□□ 2.18
NDUFS3-202ENST00000524568 DLC1Q96QB1 1528 aa28.65■■■□□ 2.18
NDUFS3-202ENST00000524568 SAFB2Q14151 953 aaKnown RBP eCLIP28.65■■■□□ 2.18
NDUFS3-202ENST00000524568 DCAF11Q8TEB1 546 aa28.65■■■□□ 2.18
NDUFS3-202ENST00000524568 AFF2P51816 1311 aa28.65■■■□□ 2.18
NDUFS3-202ENST00000524568 PRAM1Q96QH2 718 aa28.64■■■□□ 2.18
NDUFS3-202ENST00000524568 USP32Q8NFA0 1604 aa28.63■■■□□ 2.17
NDUFS3-202ENST00000524568 FOXO3O43524 673 aa28.63■■■□□ 2.17
NDUFS3-202ENST00000524568 SIRT1Q96EB6 747 aa28.63■■■□□ 2.17
NDUFS3-202ENST00000524568 KIF1AQ12756 1690 aa28.63■■■□□ 2.17
NDUFS3-202ENST00000524568 ZNF772Q68DY9 489 aaPredicted RBP28.62■■■□□ 2.17
NDUFS3-202ENST00000524568 C8orf37Q96NL8 207 aa28.62■■■□□ 2.17
NDUFS3-202ENST00000524568 ADAMTS2O95450 1211 aa28.61■■■□□ 2.17
NDUFS3-202ENST00000524568 NPHP3Q7Z494 1330 aa28.61■■■□□ 2.17
NDUFS3-202ENST00000524568 ADGRB2O60241 1585 aa28.59■■■□□ 2.17
NDUFS3-202ENST00000524568 ARHGEF28Q8N1W1 1705 aaKnown RBP28.58■■■□□ 2.17
NDUFS3-202ENST00000524568 MARF1Q9Y4F3 1742 aaKnown RBP28.58■■■□□ 2.17
NDUFS3-202ENST00000524568 TRAK1Q9UPV9 953 aa28.57■■■□□ 2.16
NDUFS3-202ENST00000524568 POGKQ9P215 609 aa28.53■■■□□ 2.16
NDUFS3-202ENST00000524568 HIRIP3Q9BW71 556 aaPredicted RBP28.51■■■□□ 2.15
NDUFS3-202ENST00000524568 RXRBP28702 533 aa28.5■■■□□ 2.15
NDUFS3-202ENST00000524568 MINK1Q8N4C8 1332 aaPredicted RBP28.49■■■□□ 2.15
NDUFS3-202ENST00000524568 NGLY1Q96IV0 654 aa28.49■■■□□ 2.15
NDUFS3-202ENST00000524568 PHF8Q9UPP1 1060 aa28.48■■■□□ 2.15
NDUFS3-202ENST00000524568 KIAA1210Q9ULL0 1709 aa28.48■■■□□ 2.15
NDUFS3-202ENST00000524568 ABCA3Q99758 1704 aa28.46■■■□□ 2.15
NDUFS3-202ENST00000524568 SPATA31A3Q5VYP0 1347 aa28.46■■■□□ 2.15
NDUFS3-202ENST00000524568 RGS12O14924 1447 aa28.46■■■□□ 2.15
NDUFS3-202ENST00000524568 KRT28Q7Z3Y7 464 aa28.46■■■□□ 2.15
NDUFS3-202ENST00000524568 CDK12Q9NYV4 1490 aaPredicted RBP28.46■■■□□ 2.15
NDUFS3-202ENST00000524568 PRR36Q9H6K5 1346 aa28.45■■■□□ 2.15
NDUFS3-202ENST00000524568 ANKARQ7Z5J8 1434 aa28.45■■■□□ 2.15
NDUFS3-202ENST00000524568 QTRT2Q9H974 415 aaKnown RBP28.45■■■□□ 2.14
NDUFS3-202ENST00000524568 TRPM3Q9HCF6 1732 aaPredicted RBP28.44■■■□□ 2.14
NDUFS3-202ENST00000524568 STAC3Q96MF2 364 aa28.44■■■□□ 2.14
NDUFS3-202ENST00000524568 PMFBP1Q8TBY8 1022 aa28.43■■■□□ 2.14
NDUFS3-202ENST00000524568 TULP4Q9NRJ4 1543 aa28.43■■■□□ 2.14
NDUFS3-202ENST00000524568 TNS3Q68CZ2 1445 aa28.42■■■□□ 2.14
NDUFS3-202ENST00000524568 FNBP4Q8N3X1 1017 aaPredicted RBP28.4■■■□□ 2.14
NDUFS3-202ENST00000524568 USP21Q9UK80 565 aa28.4■■■□□ 2.14
NDUFS3-202ENST00000524568 BCL9LQ86UU0 1499 aa28.39■■■□□ 2.13
NDUFS3-202ENST00000524568 ATRNO75882 1429 aa28.38■■■□□ 2.13
NDUFS3-202ENST00000524568 RBM6P78332 1123 aaKnown RBP28.38■■■□□ 2.13
NDUFS3-202ENST00000524568 NBPF1Q3BBV0 1214 aa28.38■■■□□ 2.13
NDUFS3-202ENST00000524568 PLEKHG5O94827 1062 aa28.37■■■□□ 2.13
NDUFS3-202ENST00000524568 ALS2Q96Q42 1657 aa28.37■■■□□ 2.13
NDUFS3-202ENST00000524568 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.36■■■□□ 2.13
NDUFS3-202ENST00000524568 WASLO00401 505 aaPredicted RBP28.36■■■□□ 2.13
NDUFS3-202ENST00000524568 CABLES1Q8TDN4 633 aa28.36■■■□□ 2.13
NDUFS3-202ENST00000524568 ITSN1Q15811 1721 aa28.35■■■□□ 2.13
NDUFS3-202ENST00000524568 ATP7BP35670 1465 aa28.35■■■□□ 2.13
NDUFS3-202ENST00000524568 SBNO1A3KN83 1393 aa28.35■■■□□ 2.13
NDUFS3-202ENST00000524568 UPF1Q92900 1129 aaKnown RBP eCLIP28.34■■■□□ 2.13
NDUFS3-202ENST00000524568 SIN3AQ96ST3 1273 aa28.34■■■□□ 2.13
NDUFS3-202ENST00000524568 PLCH1Q4KWH8 1693 aa28.33■■■□□ 2.13
NDUFS3-202ENST00000524568 PSME1Q06323 249 aa28.33■■■□□ 2.13
NDUFS3-202ENST00000524568 TOPAZ1Q8N9V7 1692 aa28.32■■■□□ 2.12
NDUFS3-202ENST00000524568 TRPC5Q9UL62 973 aaPredicted RBP28.31■■■□□ 2.12
NDUFS3-202ENST00000524568 SLIT2O94813 1529 aa28.31■■■□□ 2.12
NDUFS3-202ENST00000524568 CRYBG1Q9Y4K1 1723 aa28.31■■■□□ 2.12
NDUFS3-202ENST00000524568 EIF3AQ14152 1382 aaKnown RBP28.3■■■□□ 2.12
NDUFS3-202ENST00000524568 LMOD2Q6P5Q4 547 aa28.3■■■□□ 2.12
NDUFS3-202ENST00000524568 L3MBTL2Q969R5 705 aa28.29■■■□□ 2.12
NDUFS3-202ENST00000524568 TRPM1Q7Z4N2 1603 aa28.28■■■□□ 2.12
NDUFS3-202ENST00000524568 GLI3P10071 1580 aa28.28■■■□□ 2.12
NDUFS3-202ENST00000524568 QRICH2Q9H0J4 1663 aa28.27■■■□□ 2.12
NDUFS3-202ENST00000524568 ARHGEF10O15013 1369 aa28.26■■■□□ 2.12
NDUFS3-202ENST00000524568 NWD2Q9ULI1 1742 aa28.24■■■□□ 2.11
NDUFS3-202ENST00000524568 NUDT16Q96DE0 195 aaKnown RBP28.24■■■□□ 2.11
NDUFS3-202ENST00000524568 CDK19Q9BWU1 502 aa28.24■■■□□ 2.11
NDUFS3-202ENST00000524568 EP400Q96L91 3159 aa28.23■■■□□ 2.11
NDUFS3-202ENST00000524568 NEUROD1Q13562 356 aa28.22■■■□□ 2.11
NDUFS3-202ENST00000524568 GPRASP1Q5JY77 1395 aa28.22■■■□□ 2.11
NDUFS3-202ENST00000524568 RALGAPBQ86X10 1494 aa28.21■■■□□ 2.11
NDUFS3-202ENST00000524568 NRAPQ86VF7 1730 aa28.21■■■□□ 2.11
NDUFS3-202ENST00000524568 HAP1P54257 671 aaPredicted RBP28.21■■■□□ 2.11
NDUFS3-202ENST00000524568 BRWD3Q6RI45 1802 aa28.2■■■□□ 2.11
NDUFS3-202ENST00000524568 UNC5CLQ8IV45 518 aa28.2■■■□□ 2.1
NDUFS3-202ENST00000524568 NGDNQ8NEJ9 315 aaKnown RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms